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An endospore is a dormant, tough, and non-reproductive structure produced by some
bacteria Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of Prokaryote, prokaryotic microorganisms. Typically a few micr ...
in the phylum
Bacillota The Bacillota (synonym Firmicutes) are a phylum of bacteria, most of which have Gram-positive cell wall structure. They have round cells, called cocci (singular coccus), or rod-like forms (bacillus). A few Bacillota, such as '' Megasphaera'', ...
. The name "endospore" is suggestive of a spore or seed-like form (''endo'' means 'within'), but it is not a true
spore In biology, a spore is a unit of sexual reproduction, sexual (in fungi) or asexual reproduction that may be adapted for biological dispersal, dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores fo ...
(i.e., not an offspring). It is a stripped-down, dormant form to which the bacterium can reduce itself. Endospore formation is usually triggered by a lack of nutrients, and usually occurs in
Gram-positive bacteria In bacteriology, gram-positive bacteria are bacteria that give a positive result in the Gram stain test, which is traditionally used to quickly classify bacteria into two broad categories according to their type of cell wall. The Gram stain ...
. In endospore formation, the bacterium divides within its cell wall, and one side then engulfs the other. Endospores enable
bacteria Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of Prokaryote, prokaryotic microorganisms. Typically a few micr ...
to lie dormant for extended periods, even centuries. There are many reports of spores remaining viable over 10,000 years, and revival of spores millions of years old has been claimed. There is one report of viable spores of '' Bacillus marismortui'' in salt crystals approximately 25 million years old. When the environment becomes more favorable, the endospore can reactivate itself into a vegetative state. Most types of bacteria cannot change to the endospore form. Examples of bacterial
species A species () is often defined as the largest group of organisms in which any two individuals of the appropriate sexes or mating types can produce fertile offspring, typically by sexual reproduction. It is the basic unit of Taxonomy (biology), ...
that can form endospores include '' Bacillus cereus'', '' Bacillus anthracis'', '' Bacillus thuringiensis'', ''
Clostridium botulinum ''Clostridium botulinum'' is a Gram-positive bacteria, gram-positive, Bacillus (shape), rod-shaped, Anaerobic organism, anaerobic, endospore, spore-forming, Motility, motile bacterium with the ability to produce botulinum toxin, which is a neurot ...
'', and '' Clostridium tetani''. Endospore formation is not found among ''
Archaea Archaea ( ) is a Domain (biology), domain of organisms. Traditionally, Archaea only included its Prokaryote, prokaryotic members, but this has since been found to be paraphyletic, as eukaryotes are known to have evolved from archaea. Even thou ...
''. The endospore consists of the bacterium's
DNA Deoxyribonucleic acid (; DNA) is a polymer composed of two polynucleotide chains that coil around each other to form a double helix. The polymer carries genetic instructions for the development, functioning, growth and reproduction of al ...
, ribosomes and large amounts of dipicolinic acid. Dipicolinic acid is a spore-specific chemical that appears to help in the ability for endospores to maintain dormancy. This chemical accounts for up to 10% of the spore's dry weight. Endospores can survive without nutrients. They are resistant to
ultraviolet radiation Ultraviolet radiation, also known as simply UV, is electromagnetic radiation of wavelengths of 10–400 nanometers, shorter than that of visible light, but longer than X-rays. UV radiation is present in sunlight and constitutes about 10% of t ...
,
desiccation Desiccation is the state of extreme dryness, or the process of extreme drying. A desiccant is a hygroscopic (attracts and holds water) substance that induces or sustains such a state in its local vicinity in a moderately sealed container. The ...
, high temperature, extreme freezing and chemical disinfectants. Thermo-resistant endospores were first hypothesized by
Ferdinand Cohn Ferdinand Julius Cohn (24 January 1828 – 25 June 1898) was a German biologist. He is one of the founders of modern bacteriology and microbiology. Biography Ferdinand Julius Cohn was born in the Jewish quarter of Breslau in the Prussian Pro ...
after studying ''Bacillus subtilis'' growth on cheese after boiling the cheese. His notion of spores being the reproductive mechanism for the growth was a large blow to the previous suggestions of spontaneous generation. Astrophysicist Steinn Sigurdsson said "There are viable bacterial spores that have been found that are 40 million years old on Earth—and we know they're very hardened to radiation." Common antibacterial agents that work by destroying vegetative cell walls do not affect endospores. Endospores are commonly found in soil and water, where they may survive for long periods of time. A variety of different microorganisms form "spores" or "cysts", but the endospores of low G+C gram-positive bacteria are by far the most resistant to harsh conditions. Some classes of bacteria can turn into exospores, also known as
microbial cyst A microbial cyst is a resting or dormant stage of a microorganism, that can be thought of as a state of suspended animation in which the metabolic processes of the cell are slowed and the cell ceases all activities like feeding and locomotion. ...
s, instead of endospores. Exospores and endospores are two kinds of "hibernating" or dormant stages seen in some classes of microorganisms.


Life cycle of bacteria

The bacterial life cycle does not necessarily include sporulation. Sporulation is usually triggered by adverse environmental conditions, so as to help the survival of the bacterium. Endospores exhibit no signs of life and can thus be described as cryptobiotic. Endospores retain viability indefinitely and they can germinate into vegetative cells under the appropriate conditions. Endospores have survived thousands of years until environmental stimuli trigger germination. They have been characterized as the most durable cells produced in nature.


Structure

Bacteria produce a single endospore internally. The spore is sometimes surrounded by a thin covering known as the exosporium, which overlies the ''spore coat''. The spore coat, which acts like a sieve that excludes large toxic molecules like
lysozyme Lysozyme (, muramidase, ''N''-acetylmuramide glycanhydrolase; systematic name peptidoglycan ''N''-acetylmuramoylhydrolase) is an antimicrobial enzyme produced by animals that forms part of the innate immune system. It is a glycoside hydrolase ...
, is resistant to many toxic
molecules A molecule is a group of two or more atoms that are held together by attractive forces known as chemical bonds; depending on context, the term may or may not include ions that satisfy this criterion. In quantum physics, organic chemistry ...
and may also contain
enzymes An enzyme () is a protein that acts as a biological catalyst by accelerating chemical reactions. The molecules upon which enzymes may act are called substrates, and the enzyme converts the substrates into different molecules known as pro ...
that are involved in
germination Germination is the process by which an organism grows from a seed or spore. The term is applied to the sprouting of a seedling from a seed of an angiosperm or gymnosperm, the growth of a sporeling from a spore, such as the spores of fungi, ...
. In '' Bacillus subtilus'' endospores, the spore coat is estimated to contain more than 70 coat proteins, which are organized into an inner and an outer coat layer. The X-ray diffraction pattern of purified ''B. subtilis'' endospores indicates the presence of a component with a regular periodic structure, which Kadota and Iijima speculated might be formed from a keratin-like protein. However, after further studies this group concluded that the structure of the spore coat protein was different from keratin. When the ''B. subtilis'' genome was sequenced, no ortholog of human keratin was detected. The ''cortex'' lies beneath the spore coat and consists of
peptidoglycan Peptidoglycan or murein is a unique large macromolecule, a polysaccharide, consisting of sugars and amino acids that forms a mesh-like layer (sacculus) that surrounds the bacterial cytoplasmic membrane. The sugar component consists of alternating ...
. The ''core wall'' lies beneath the cortex and surrounds the
protoplast Protoplast (), is a biology, biological term coined by Johannes von Hanstein, Hanstein in 1880 to refer to the entire cell, excluding the cell wall. Protoplasts can be generated by stripping the cell wall from plant, bacterium, bacterial, or f ...
or ''core'' of the endospore. The core contains the spore chromosomal DNA which is encased in
chromatin Chromatin is a complex of DNA and protein found in eukaryote, eukaryotic cells. The primary function is to package long DNA molecules into more compact, denser structures. This prevents the strands from becoming tangled and also plays important r ...
-like proteins known as SASPs (small acid-soluble spore proteins), that protect the spore DNA from UV radiation and heat. The core also contains normal cell structures, such as
ribosome Ribosomes () are molecular machine, macromolecular machines, found within all cell (biology), cells, that perform Translation (biology), biological protein synthesis (messenger RNA translation). Ribosomes link amino acids together in the order s ...
s and other
enzymes An enzyme () is a protein that acts as a biological catalyst by accelerating chemical reactions. The molecules upon which enzymes may act are called substrates, and the enzyme converts the substrates into different molecules known as pro ...
, but is not metabolically active. Up to 20% of the dry weight of the endospore consists of
calcium Calcium is a chemical element; it has symbol Ca and atomic number 20. As an alkaline earth metal, calcium is a reactive metal that forms a dark oxide-nitride layer when exposed to air. Its physical and chemical properties are most similar to it ...
dipicolinate within the core, which is thought to stabilize the DNA. Dipicolinic acid could be responsible for the heat resistance of the spore, and calcium may aid in resistance to heat and oxidizing agents. However, mutants resistant to heat but lacking dipicolinic acid have been isolated, suggesting other mechanisms contributing to heat resistance are also at work. Small acid-soluble proteins (SASPs) are found in endospores. These proteins tightly bind and condense the DNA, and are in part responsible for resistance to UV light and DNA-damaging chemicals. Visualising endospores under light microscopy can be difficult due to the impermeability of the endospore wall to dyes and stains. While the rest of a bacterial cell may stain, the endospore is left colourless. To combat this, a special stain technique called a Moeller stain is used. That allows the endospore to show up as red, while the rest of the cell stains blue. Another staining technique for endospores is the Schaeffer-Fulton stain, which stains endospores green and bacterial bodies red. The arrangement of spore layers is as follows: * Exosporium * Spore coat * Spore cortex * Core wall


Location

The position of the endospore differs among bacterial species and is useful in identification. The main types within the cell are terminal, subterminal, and centrally placed endospores. Terminal endospores are seen at the poles of cells, whereas central endospores are more or less in the middle. Subterminal endospores are those between these two extremes, usually seen far enough towards the poles but close enough to the center so as not to be considered either terminal or central. Lateral endospores are seen occasionally. Examples of bacteria having terminal endospores include '' Clostridium tetani'', the pathogen that causes the disease tetanus. Bacteria having a centrally placed endospore include '' Bacillus cereus''. Sometimes the endospore can be so large the cell can be distended around the endospore. This is typical of ''Clostridium tetani''.


Formation and destruction

Under conditions of starvation, especially the lack of carbon and nitrogen sources, a single endospore forms within some of the bacteria through a process called sporulation. When a bacterium detects environmental conditions are becoming unfavourable it may start the process of endosporulation, which takes about eight hours. The DNA is replicated and a membrane wall known as a ''spore
septum In biology, a septum (Latin language, Latin for ''something that encloses''; septa) is a wall, dividing a Body cavity, cavity or structure into smaller ones. A cavity or structure divided in this way may be referred to as septate. Examples Hum ...
'' begins to form between it and the rest of the cell. The
plasma membrane The cell membrane (also known as the plasma membrane or cytoplasmic membrane, and historically referred to as the plasmalemma) is a biological membrane that separates and protects the interior of a cell from the outside environment (the extr ...
of the cell surrounds this wall and pinches off to leave a double membrane around the DNA, and the developing structure is now known as a forespore. Calcium dipicolinate, the calcium salt of dipicolinic acid, is incorporated into the forespore during this time. The dipicolinic acid helps stabilize the proteins and DNA in the endospore. Next the peptidoglycan cortex forms between the two layers and the bacterium adds a spore coat to the outside of the forespore. In the final stages of endospore formation the newly forming endospore is dehydrated and allowed to mature before being released from the mother cell. The cortex is what makes the endospore so resistant to temperature. The cortex contains an inner membrane known as the core. The inner membrane that surrounds this core leads to the endospore's resistance against UV light and harsh chemicals that would normally destroy microbes. Sporulation is now complete, and the mature endospore will be released when the surrounding vegetative cell is degraded. Endospores are resistant to most agents that would normally kill the vegetative cells they formed from. Unlike persister cells, endospores are the result of a morphological differentiation process triggered by nutrient limitation (starvation) in the environment; endosporulation is initiated by quorum sensing within the "starving" population.Most disinfectants such as household cleaning products, alcohols, quaternary ammonium compounds and detergents have little effect on endospores. However, sterilant alkylating agents such as ethylene oxide (ETO), and 10% bleach are effective against endospores. To kill most anthrax spores, standard household bleach (with 10% sodium hypochlorite) must be in contact with the spores for at least several minutes; a very small proportion of spores can survive longer than 10 minutes in such a solution. Higher concentrations of bleach are not more effective, and can cause some types of bacteria to aggregate and thus survive. While significantly resistant to heat and radiation, endospores can be destroyed by burning or by autoclaving at a temperature exceeding the boiling point of water, 100 °C. Endospores are able to survive at 100 °C for hours, although the larger the number of hours the fewer that will survive. An indirect way to destroy them is to place them in an environment that reactivates them to their vegetative state. They will germinate within a day or two with the right environmental conditions, and then the vegetative cells, not as hardy as endospores, can be straightforwardly destroyed. This indirect method is called Tyndallization. It was the usual method for a while in the late 19th century before the introduction of inexpensive autoclaves. Prolonged exposure to ionising radiation, such as
x-ray An X-ray (also known in many languages as Röntgen radiation) is a form of high-energy electromagnetic radiation with a wavelength shorter than those of ultraviolet rays and longer than those of gamma rays. Roughly, X-rays have a wavelength ran ...
s and
gamma ray A gamma ray, also known as gamma radiation (symbol ), is a penetrating form of electromagnetic radiation arising from high energy interactions like the radioactive decay of atomic nuclei or astronomical events like solar flares. It consists o ...
s, will also kill most endospores. The endospores of certain types of (typically non-pathogenic) bacteria, such as '' Geobacillus stearothermophilus'', are used as probes to verify that an autoclaved item has been rendered truly sterile: a small capsule containing the spores is put into the autoclave with the items; after the cycle the content of the capsule is cultured to check if anything will grow from it. If nothing will grow, then the spores were destroyed and the sterilization was successful. In hospitals, endospores on delicate invasive instruments such as
endoscope An endoscope is an inspection instrument composed of image sensor, optical lens, light source and mechanical device, which is used to look deep into the body by way of openings such as the mouth or anus. A typical endoscope applies several modern ...
s are killed by low-temperature, and non-corrosive, ethylene oxide sterilizers. Ethylene oxide is the only low-temperature sterilant to stop outbreaks on these instruments. In contrast, "high level disinfection" does not kill endospores but is used for instruments such as a colonoscope that do not enter sterile bodily cavities. This latter method uses only warm water, enzymes, and detergents. Bacterial endospores are resistant to
antibiotics An antibiotic is a type of antimicrobial substance active against bacteria. It is the most important type of antibacterial agent for fighting pathogenic bacteria, bacterial infections, and antibiotic medications are widely used in the therapy ...
, most disinfectants, and physical agents such as radiation, boiling, and drying. The impermeability of the spore coat is thought to be responsible for the endospore's resistance to chemicals. The heat resistance of endospores is due to a variety of factors: * Calcium dipicolinate, abundant within the endospore, may stabilize and protect the endospore's DNA. * Small acid-soluble proteins (SASPs) saturate the endospore's DNA and protect it from heat, drying, chemicals, and radiation. They also function as a carbon and energy source for the development of a vegetative bacterium during germination. * The cortex may osmotically remove water from the interior of the endospore and the dehydration that results is thought to be very important in the endospore's resistance to heat and radiation. * Finally, DNA repair enzymes contained within the endospore are able to repair damaged DNA during germination.


Reactivation

Reactivation of the endospore occurs when conditions are more favourable and involves ''activation'', ''germination'', and ''outgrowth''. Even if an endospore is located in plentiful nutrients, it may fail to germinate unless activation has taken place. This may be triggered by heating the endospore. Germination involves the dormant endospore starting metabolic activity and thus breaking hibernation. It is commonly characterised by rupture or absorption of the spore coat, swelling of the endospore, an increase in metabolic activity, and loss of resistance to environmental stress. Outgrowth follows germination and involves the core of the endospore manufacturing new chemical components and exiting the old spore coat to develop into a fully functional vegetative bacterial cell, which can divide to produce more cells. Endospores possess five times more sulfur than vegetative cells. This excess sulfur is concentrated in spore coats as an amino acid,
cysteine Cysteine (; symbol Cys or C) is a semiessential proteinogenic amino acid with the chemical formula, formula . The thiol side chain in cysteine enables the formation of Disulfide, disulfide bonds, and often participates in enzymatic reactions as ...
. It is believed that the macromolecule accountable for maintaining the dormant state has a protein coat rich in cystine, stabilized by S-S linkages. A reduction in these linkages has the potential to change the tertiary structure, causing the protein to unfold. This conformational change in the protein is thought to be responsible for exposing active enzymatic sites necessary for endospore germination. Endospores can stay dormant for a very long time. For instance, endospores were found in the tombs of the Egyptian pharaohs. When placed in appropriate medium, under appropriate conditions, they were able to be reactivated. In 1995, Raul Cano of California Polytechnic State University found bacterial spores in the gut of a fossilized bee trapped in amber from a tree in the
Dominican Republic The Dominican Republic is a country located on the island of Hispaniola in the Greater Antilles of the Caribbean Sea in the Atlantic Ocean, North Atlantic Ocean. It shares a Maritime boundary, maritime border with Puerto Rico to the east and ...
. The bee fossilized in amber was dated to being about 25 million years old. The spores germinated when the amber was cracked open and the material from the gut of the bee was extracted and placed in nutrient medium. After the spores were analyzed by microscopy, it was determined that the cells were very similar to '' Lysinibacillus sphaericus'' which is found in bees in the Dominican Republic today.


Importance

As a simplified model for cellular differentiation, the molecular details of endospore formation have been extensively studied, specifically in the
model organism A model organism is a non-human species that is extensively studied to understand particular biological phenomena, with the expectation that discoveries made in the model organism will provide insight into the workings of other organisms. Mo ...
''
Bacillus subtilis ''Bacillus subtilis'' (), known also as the hay bacillus or grass bacillus, is a gram-positive, catalase-positive bacterium, found in soil and the gastrointestinal tract of ruminants, humans and marine sponges. As a member of the genus ''Bacill ...
''. These studies have contributed much to our understanding of the regulation of
gene expression Gene expression is the process (including its Regulation of gene expression, regulation) by which information from a gene is used in the synthesis of a functional gene product that enables it to produce end products, proteins or non-coding RNA, ...
,
transcription factor In molecular biology, a transcription factor (TF) (or sequence-specific DNA-binding factor) is a protein that controls the rate of transcription (genetics), transcription of genetics, genetic information from DNA to messenger RNA, by binding t ...
s, and the
sigma factor A sigma factor (σ factor or specificity factor) is a protein needed for initiation of Transcription (biology), transcription in bacteria. It is a bacterial transcription initiation factor that enables specific binding of RNA polymerase (RNAP) to g ...
subunits of
RNA polymerase In molecular biology, RNA polymerase (abbreviated RNAP or RNApol), or more specifically DNA-directed/dependent RNA polymerase (DdRP), is an enzyme that catalyzes the chemical reactions that synthesize RNA from a DNA template. Using the e ...
. Endospores of the bacterium '' Bacillus anthracis'' were used in the
2001 anthrax attacks The 2001 anthrax attacks, also known as Amerithrax (a portmanteau of "United States, America" and "anthrax", from its FBI case name), occurred in the United States over the course of several weeks beginning on September 18, 2001, one week after th ...
. The powder found in contaminated postal letters consisted of anthrax endospores. This intentional distribution led to 22 known cases of anthrax (11 inhalation and 11 cutaneous). The case fatality rate among those patients with inhalation anthrax was 45% (5/11). The six other individuals with inhalation anthrax and all the individuals with cutaneous anthrax recovered. Had it not been for antibiotic therapy, this number would likely have been higher. Sporulation requires the presence of free oxygen. In the natural situation, this means the vegetative cycles occur within the low oxygen environment of the infected host and, within the host, the organism is exclusively in the vegetative form. Once outside the host, sporulation commences upon exposure to the air and the spore forms are essentially the exclusive phase in the environment.


Biotechnology

''Bacillus subtilis'' spores are useful for the expression of recombinant proteins and in particular for the surface display of peptides and proteins as a tool for fundamental and applied research in the fields of microbiology, biotechnology and vaccination.


Endospore-forming bacteria

Examples of endospore-forming bacteria include the genera: * '' Acetonema'' * '' Actinomyces'' * '' Alkalibacillus'' * '' Ammoniphilus'' * '' Amphibacillus'' * '' Anaerobacter'' * '' Anaerospora'' * '' Aneurinibacillus'' * '' Anoxybacillus'' * ''
Bacillus ''Bacillus'', from Latin "bacillus", meaning "little staff, wand", is a genus of Gram-positive, rod-shaped bacteria, a member of the phylum ''Bacillota'', with 266 named species. The term is also used to describe the shape (rod) of other so-sh ...
'' * ''
Brevibacillus ''Brevibacillus'' is a genus of Gram-positive bacteria in the family Brevibacillaceae. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnolo ...
'' * '' Caldanaerobacter'' * '' Caloramator'' * '' Caminicella'' * '' Cerasibacillus'' * '' Clostridium'' * '' Clostridiisalibacter'' * '' Cohnella'' * '' Coxiella'' (i.e. '' Coxiella burnetii'') * '' Dendrosporobacter'' * '' Desulfotomaculum'' * '' Desulfosporomusa'' * '' Desulfosporosinus'' * '' Desulfovirgula'' * '' Desulfunispora'' * '' Desulfurispora'' * '' Filifactor'' * '' Filobacillus'' * '' Gelria'' * '' Geobacillus'' * '' Geosporobacter'' * '' Gracilibacillus'' * '' Halobacillus'' * '' Halonatronum'' * '' Heliobacterium'' * '' Heliophilum'' * '' Laceyella'' * '' Lentibacillus'' * '' Lysinibacillus'' * '' Mahella'' * '' Metabacterium'' * '' Moorella'' * '' Natroniella'' * '' Oceanobacillus'' * ''
Orenia ''Orenia'' is a genus of bacteria from the family of Halobacteroidaceae. Orenia bacteria occurs in Saline water, saline environments. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclat ...
'' * '' Ornithinibacillus'' * '' Oxalophagus'' * '' Oxobacter'' * '' Paenibacillus'' * '' Paraliobacillus'' * '' Pelospora'' * '' Pelotomaculum'' * '' Piscibacillus'' * '' Planifilum'' * '' Pontibacillus'' * '' Propionispora'' * ''
Salinibacillus ''Salinibacillus'' is a genus of bacteria from the family of Bacillaceae. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Informatio ...
'' * '' Salsuginibacillus'' * '' Seinonella'' * '' Shimazuella'' * '' Sporacetigenium'' * '' Sporoanaerobacter'' * '' Sporobacter'' * '' Sporobacterium'' * '' Sporohalobacter'' * '' Sporolactobacillus'' * '' Sporomusa'' * '' Sporosarcina'' * '' Sporotalea'' * '' Sporotomaculum'' * '' Syntrophomonas'' * '' Syntrophospora'' * '' Tenuibacillus'' * '' Tepidibacter'' * '' Terribacillus'' * '' Thalassobacillus'' * '' Thermoacetogenium'' * '' Thermoactinomyces'' * '' Thermoalkalibacillus'' * '' Thermoanaerobacter'' * '' Thermoanaeromonas'' * '' Thermobacillus'' * '' Thermoflavimicrobium'' * '' Thermovenabulum'' * '' Tuberibacillus'' * '' Virgibacillus'' * '' Vulcanobacillus''


References


External links


Marise A. Hussey and Anne Zayaitz – ''Endospore stain protocol'' – Microbe Library (''American Society of Microbiology'')

Endospores – Brief microbiology text page



Resistance of ''bacillus'' endospores to extreme terrestrial and extraterrestrial environments
{{Authority control Bacteriology