Microxyphiomyces
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Microxyphiomyces
''Microxyphiomyces'' is a genus of lichen-forming fungi in the family Gomphillaceae. The genus was originally proposed in 1961 by Augusto Chaves Batista and colleagues, but was later merged into the genus ''Tricharia'' for much of the twentieth century before being reinstated in 2023 based on molecular evidence. These are minute lichens that grow exclusively on the surfaces of living leaves in tropical and subtropical forests, forming thin crusts decorated with fine black bristles and producing small disc-shaped reproductive structures. The genus has a pantropical distribution, with species recorded from the Neotropics, western Pacific, and East Asia. Taxonomy ''Microxyphiomyces'' was circumscribed by Augusto Chaves Batista, R.C. Valle, and Generosa Emília Pontual Peres in 1961 for a foliicolous (leaf-dwelling) lichen that had previously been shuffled among several imperfect fungus genera. Their protologue designated ''M. manaosensis'' as the type species; that name is n ...
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Gomphillaceae
The Gomphillaceae are a family of lichen-forming fungi in the order Graphidales. Species in this family are found mostly in tropical regions. The family underwent a major molecular phylogenetics-led reorganisation in 2023, in which 17 genera were recognised and formally established as new or reinstated. Taxonomy The Gomphillaceae has undergone significant taxonomic revision as molecular analysis techniques have improved scientists' understanding of relationships between species. As of 2024, the family includes approximately 440 accepted species, of which 422 are lichenised (form a symbiotic relationship with algae) and 18 are lichenicolous or fungicolous (grow on other lichens or fungi). The family is particularly diverse in tropical regions, where many species grow on leaves in wet forests. However, some members, particularly in the genus '' Gyalideopsis'', can also be found growing on other surfaces and extend into temperate regions. Recent molecular phylogenetics studies (an ...
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Tricharia
''Tricharia'' is a genus of lichens in the family Gomphillaceae. It has an estimated 30 species. Taxonomy Recent molecular studies have shown that the long, carbon-black bristles (sterile ) that once united many species under ''Tricharia'' evolved several times independently within the family. A two-gene phylogeny published in 2024 confirmed that the type lineage of ''Tricharia'' (species with pale, thin-walled apothecial rims) forms a well-supported clade distinct from three other "black-setae" groups that had been bundled together on the basis of bristle morphology. In particular, the Costa Rican species ''Tricharia paradoxa''—long treated as an odd member of the genus—was transferred to the monospecific genus '' Paratricharia'' and shown to be sister to '' Caleniopsis'' in the early-diverging ''Aulaxina'' clade, far removed from ''Tricharia'' in the strict sense. The same analysis placed the remaining black-setae taxa in the separate genera '' Microxyphiomyces'' and ''San ...
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Validly Published Name
In botanical nomenclature, a validly published name is a name that meets the requirements in the ''International Code of Nomenclature for algae, fungi, and plants'' (''ICN'') for valid publication. Valid publication of a name represents the minimum requirements for a botanical name to exist: terms that appear to be names but have not been validly published are referred to in the ''ICN'' as "designations". A validly published name may not satisfy all the requirements to be '' legitimate''. It is also not necessarily the correct name for a particular taxon and rank. Names that are not valid by ICN standards (''nomen invalidum'', ''nom. inval.'') are sometimes in use. This may occur when a taxonomist finds and recognises a taxon and thinks of a name, but delays publishing it in an adequate manner. A common reason to delay valid publication is that a taxonomist intends to write a ''magnum opus'' that provides an overview of the group, rather than a series of small papers. Another re ...
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Understory
In forestry and ecology, understory (American English), or understorey (English in the Commonwealth of Nations, Commonwealth English), also known as underbrush or undergrowth, includes plant life growing beneath the Canopy (biology), forest canopy without penetrating it to any great extent, but above the forest floor. Only a small percentage of light penetrates the canopy, so understory vegetation is generally Shade tolerance, shade-tolerant. The understory typically consists of trees stunted through lack of light, other small trees with low light requirements, saplings, shrubs, vines, and undergrowth. Small trees such as holly and Cornus (genus), dogwood are understory specialists. In Temperate broadleaf and mixed forest, temperate deciduous forests, many understory plants start into growth earlier in the year than the canopy trees, to make use of the greater availability of light at that particular time of year. A gap in the canopy caused by the death of a tree stimulates the ...
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Colonisation (biology)
Colonisation or colonization is the spread and development of an organism in a new area or habitat. Colonization comprises the physical arrival of a species in a new area, but also its successful establishment within the local community. In ecology, it is represented by the symbol ''λ'' (lowercase lambda) to denote the long-term intrinsic growth rate of a population. Surrounding theories and applicable process have been introduced below. These include dispersal, colonisation-competition trade off and prominent examples that have been previously studied. One classic scientific model in biogeography posits that a species must continue to colonize new areas through its Biological life cycle, life cycle (called a ''taxon cycle'') in order to persist. Accordingly, colonisation and extinction are key components of island biogeography, a theory that has many applications in ecology, such as Metapopulation, metapopulations. Another factor included in this scientific model is the compet ...
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Propagule
In biology, a propagule is any material that functions in propagating an organism to the next stage in its life cycle, such as by dispersal. The propagule is usually distinct in form from the parent organism. Propagules are produced by organisms such as plants (in the form of seeds or spores), fungi (in the form of spores), and bacteria (for example endospores or microbial cysts). In disease biology, pathogens are said to generate infectious propagules, the units that transmit a disease. These can refer to bacteria, viruses, fungi, or protists, and can be contained within host material. For instance, for influenza, the infectious propagules are carried in droplets of host saliva or mucus that are expelled during coughing or sneezing. In horticulture, a propagule is any plant material used for the purpose of plant propagation. In asexual reproduction, a propagule is often a stem cutting. In some plants, a leaf section or a portion of root can be used. In sexual reprodu ...
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Septum
In biology, a septum (Latin language, Latin for ''something that encloses''; septa) is a wall, dividing a Body cavity, cavity or structure into smaller ones. A cavity or structure divided in this way may be referred to as septate. Examples Human anatomy * Interatrial septum, the wall of tissue that is a sectional part of the left and right atria of the heart * Interventricular septum, the wall separating the left and right ventricles of the heart * Lingual septum, a vertical layer of fibrous tissue that separates the halves of the tongue *Nasal septum: the cartilage wall separating the nostrils of the nose * Alveolar septum: the thin wall which separates the Pulmonary alveolus, alveoli from each other in the lungs * Orbital septum, a palpebral ligament in the upper and lower eyelids * Septum pellucidum or septum lucidum, a thin structure separating two fluid pockets in the brain * Uterine septum, a malformation of the uterus * Septum of the penis, Penile septum, a fibrous w ...
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Ascospore
In fungi, an ascospore is the sexual spore formed inside an ascus—the sac-like cell that defines the division Ascomycota, the largest and most diverse Division (botany), division of fungi. After two parental cell nucleus, nuclei fuse, the ascus undergoes meiosis (halving of genetic material) followed by a mitosis (cell division), ordinarily producing eight genetically distinct haploid spores; most yeasts stop at four ascospores, whereas some moulds carry out extra post-meiotic divisions to yield dozens. Many asci build turgor, internal pressure and shoot their spores clear of the calm boundary layer, thin layer of still air enveloping the fruit body, whereas subterranean truffles depend on animals for biological dispersal, dispersal. Ontogeny, Development shapes both form and endurance of ascospores. A hook-shaped crozier aligns the paired nuclei; a double-biological membrane, membrane system then parcels each daughter nucleus, and successive wall layers of β-glucan, chitosan ...
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Hymenium
The hymenium is the tissue layer on the hymenophore of a fungal fruiting body where the cells develop into basidia or asci, which produce spores. In some species all of the cells of the hymenium develop into basidia or asci, while in others some cells develop into sterile cells called cystidia ( basidiomycetes) or paraphyses ( ascomycetes). Cystidia are often important for microscopic identification. The subhymenium consists of the supportive hyphae from which the cells of the hymenium grow, beneath which is the hymenophoral trama, the hyphae that make up the mass of the hymenophore. The position of the hymenium is traditionally the first characteristic used in the classification and identification of mushrooms. Below are some examples of the diverse types which exist among the macroscopic Basidiomycota and Ascomycota. * In agarics, the hymenium is on the vertical faces of the gills. * In boletes and polypores, it is in a spongy mass of downward-pointing tubes ...
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Apothecia
An ascocarp, or ascoma (: ascomata), is the fruiting body ( sporocarp) of an ascomycete phylum fungus. It consists of very tightly interwoven hyphae and millions of embedded asci, each of which typically contains four to eight ascospores. Ascocarps are most commonly bowl-shaped (apothecia) but may take on a spherical or flask-like form that has a pore opening to release spores (perithecia) or no opening (cleistothecia). Classification The ascocarp is classified according to its placement (in ways not fundamental to the basic taxonomy). It is called ''epigeous'' if it grows above ground, as with the morels, while underground ascocarps, such as truffles, are termed ''hypogeous''. The structure enclosing the hymenium is divided into the types described below (apothecium, cleistothecium, etc.) and this character ''is'' important for the taxonomic classification of the fungus. Apothecia can be relatively large and fleshy, whereas the others are microscopic—about the s ...
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Locus (genetics)
In genetics, a locus (: loci) is a specific, fixed position on a chromosome where a particular gene or genetic marker is located. Each chromosome carries many genes, with each gene occupying a different position or locus; in humans, the total number of Human genome#Coding sequences (protein-coding genes), protein-coding genes in a complete haploid set of 23 chromosomes is estimated at 19,000–20,000. Genes may possess multiple variants known as alleles, and an allele may also be said to reside at a particular locus. Diploid and polyploid cells whose chromosomes have the same allele at a given locus are called homozygote, homozygous with respect to that locus, while those that have different alleles at a given locus are called heterozygote, heterozygous. The ordered list of loci known for a particular genome is called a gene map. Gene mapping is the process of determining the specific locus or loci responsible for producing a particular phenotype or biological trait. Association ma ...
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