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Lactobacillales are an order of gram-positive, low-GC, acid-tolerant, generally nonsporulating, nonrespiring, either rod-shaped ( bacilli) or spherical ( cocci) bacteria that share common
metabolic Metabolism (, from el, μεταβολή ''metabolē'', "change") is the set of life-sustaining chemical reactions in organisms. The three main functions of metabolism are: the conversion of the energy in food to energy available to run cell ...
and
physiological Physiology (; ) is the scientific study of functions and mechanisms in a living system. As a sub-discipline of biology, physiology focuses on how organisms, organ systems, individual organs, cells, and biomolecules carry out the chemical ...
characteristics. These bacteria, usually found in decomposing plants and milk products, produce lactic acid as the major metabolic end product of carbohydrate
fermentation Fermentation is a metabolic process that produces chemical changes in organic substrates through the action of enzymes. In biochemistry, it is narrowly defined as the extraction of energy from carbohydrates in the absence of oxygen. In food ...
, giving them the common name lactic acid bacteria (LAB). Production of lactic acid has linked LAB with food fermentations, as acidification inhibits the growth of spoilage agents. Proteinaceous bacteriocins are produced by several LAB strains and provide an additional hurdle for spoilage and pathogenic microorganisms. Furthermore, lactic acid and other metabolic products contribute to the organoleptic and textural profile of a food item. The industrial importance of the LAB is further evidenced by their generally recognized as safe (GRAS) status, due to their ubiquitous appearance in food and their contribution to the healthy microbiota of animal and human mucosal surfaces. The
genera Genus ( plural genera ) is a taxonomic rank used in the biological classification of living and fossil organisms as well as viruses. In the hierarchy of biological classification, genus comes above species and below family. In binomial nomenclat ...
that comprise the LAB are at its core '' Lactobacillus'', '' Leuconostoc'', '' Pediococcus'', '' Lactococcus'', and '' Streptococcus'', as well as the more peripheral ''
Aerococcus ''Aerococcus'' is a genus in the phylum Bacillota (Bacteria). The genus was first identified in 1953 from samples of air and dust as a catalase-negative, gram-positive coccus that grew in small clusters. They were subsequently found in hospital ...
'', ''
Carnobacterium ''Carnobacterium'' is a genus of Gram-positive bacteria within the family Carnobacteriaceae. ''C. divergens'' and ''C. maltaromaticum'' are found in the wild and in food products and can grow anaerobically. These species are not known to be patho ...
'', '' Enterococcus'', '' Oenococcus'', '' Sporolactobacillus'', '' Tetragenococcus'', ''
Vagococcus ''Vagococcus'' is a genus of gram-positive bacteria. They are motile or nonmotile cocci which do not form spores. The name Vagococcus comes from Latin adjective ''vagus'' meaning wandering; and the Greek noun ''coccus'' a grain or berry, ''Vagoco ...
'', and ''
Weissella ''Weissella'' is a genus of gram-positive bacteria placed within the family Lactobacillaceae, formerly considered species of the ''Leuconostoc paramesenteroides'' group. The morphology of ''Weissella'' species varies from spherical or lenticula ...
''. All but '' Sporolactobacillus'' are members of the Lactobacillales order, and all are members of the Bacillota phylum. Although lactic acid bacteria are generally associated with the order Lactobacillales, bacteria of the genus '' Bifidobacterium'' (phylum Actinomycetota) also produce lactic acid as the major product of carbohydrate metabolism.


Characteristics

The lactic acid bacteria (LAB) are either rod-shaped ( bacilli), or spherical ( cocci), and are characterized by an increased tolerance to acidity (low pH range). This aspect helps LAB to outcompete other bacteria in a natural
fermentation Fermentation is a metabolic process that produces chemical changes in organic substrates through the action of enzymes. In biochemistry, it is narrowly defined as the extraction of energy from carbohydrates in the absence of oxygen. In food ...
, as they can withstand the increased acidity from organic acid production (e.g., lactic acid). Laboratory media used for LAB typically include a carbohydrate source, as most species are incapable of respiration. LAB are
catalase Catalase is a common enzyme found in nearly all living organisms exposed to oxygen (such as bacteria, plants, and animals) which catalyzes the decomposition of hydrogen peroxide to water and oxygen. It is a very important enzyme in protecting t ...
-negative. LAB are amongst the most important groups of microorganisms used in the food industry. Their relative simple metabolism has also prompted their use as microbial cell factories for the production of several commodities for the food and non-food sectors


Metabolism

LAB genera are classified in terms of two main pathways of hexose fermentation: #Under conditions of excess glucose and limited oxygen, homolactic LAB catabolize one mole of glucose in the Embden-Meyerhof-Parnas pathway to yield two moles of
pyruvate Pyruvic acid (CH3COCOOH) is the simplest of the alpha-keto acids, with a carboxylic acid and a ketone functional group. Pyruvate, the conjugate base, CH3COCOO−, is an intermediate in several metabolic pathways throughout the cell. Pyruvic aci ...
. Intracellular redox balance is maintained through the oxidation of NADH, concomitant with pyruvate reduction to lactic acid. This process yields two moles of
ATP ATP may refer to: Companies and organizations * Association of Tennis Professionals, men's professional tennis governing body * American Technical Publishers, employee-owned publishing company * ', a Danish pension * Armenia Tree Project, non ...
per mole of glucose consumed. Representative homolactic LAB genera include ''Lactococcus'', ''Enterococcus'', ''Streptococcus'', ''Pediococcus'', and group I lactobacilli # Heterofermentative LAB use the pentose phosphate pathway, alternatively referred to as the pentose phosphoketolase pathway. One mole of glucose-6-phosphate is initially dehydrogenated to 6-phosphogluconate and subsequently decarboxylated to yield one mole of CO2. The resulting pentose-5-phosphate is cleaved into one mole glyceraldehyde phosphate (GAP) and one mole acetyl phosphate. GAP is further metabolized to lactate as in homofermentation, with the acetyl phosphate reduced to ethanol via
acetyl-CoA Acetyl-CoA (acetyl coenzyme A) is a molecule that participates in many biochemical reactions in protein, carbohydrate and lipid metabolism. Its main function is to deliver the acetyl group to the citric acid cycle (Krebs cycle) to be oxidized for ...
and
acetaldehyde Acetaldehyde (IUPAC systematic name ethanal) is an organic chemical compound with the formula CH3 CHO, sometimes abbreviated by chemists as MeCHO (Me = methyl). It is a colorless liquid or gas, boiling near room temperature. It is one of the mos ...
intermediates. In theory, end products (including ATP) are produced in equimolar quantities from the
catabolism Catabolism () is the set of metabolic pathways that breaks down molecules into smaller units that are either oxidized to release energy or used in other anabolic reactions. Catabolism breaks down large molecules (such as polysaccharides, lipids, ...
of one mole of glucose. Obligate heterofermentative LAB include ''Leuconostoc'', ''Oenococcus'', ''Weissella'', and group III lactobacilli Some members of ''Lactobacillus'' appear also able to perform
aerobic respiration Cellular respiration is the process by which biological fuels are oxidised in the presence of an inorganic electron acceptor such as oxygen to produce large amounts of energy, to drive the bulk production of ATP. Cellular respiration may be des ...
, making them facultative anaerobes, unlike the other members of the order, which are all aerotolerant. Using oxygen helps these bacteria deal with stress.


''Streptococcus'' reclassification

In 1985, members of the diverse genus ''Streptococcus'' were reclassified into '' Lactococcus'', '' Enterococcus'', ''
Vagococcus ''Vagococcus'' is a genus of gram-positive bacteria. They are motile or nonmotile cocci which do not form spores. The name Vagococcus comes from Latin adjective ''vagus'' meaning wandering; and the Greek noun ''coccus'' a grain or berry, ''Vagoco ...
'', and '' Streptococcus'' based on biochemical characteristics, as well as molecular features. Formerly, streptococci were segregated primarily based on serology, which has proven to correlate well with the current taxonomic definitions. Lactococci (formerly Lancefield group N streptococci) are used extensively as fermentation starters in
dairy A dairy is a business enterprise established for the harvesting or processing (or both) of animal milk – mostly from cows or buffaloes, but also from goats, sheep, horses, or camels – for human consumption. A dairy is typically located on ...
production, with humans estimated to consume 1018 lactococci annually. Partly due to their industrial relevance, both '' L. lactis'' subspecies (''L. l. lactis'' and ''L. l. cremoris'') are widely used as generic LAB models for research. ''L. lactis'' ssp. ''cremoris'', used in the production of hard
cheese Cheese is a dairy product produced in wide ranges of flavors, textures, and forms by coagulation of the milk protein casein. It comprises proteins and fat from milk, usually the milk of cows, buffalo, goats, or sheep. During production, ...
s, is represented by the laboratory strains LM0230 and MG1363. In similar manner, ''L. lactis'' ssp. ''lactis'' is employed in soft cheese fermentations, with the workhorse strain IL1403 ubiquitous in LAB research laboratories. In 2001, Bolotin ''et al.'' sequenced the genome of IL1403, which coincided with a significant shift of resources to understanding LAB
genomics Genomics is an interdisciplinary field of biology focusing on the structure, function, evolution, mapping, and editing of genomes. A genome is an organism's complete set of DNA, including all of its genes as well as its hierarchical, three-dim ...
and related applications.


Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature and the phylogeny is based on 16S rRNA-based LTP release 106 by
'The All-Species Living Tree' Project The All-Species Living Tree' Project is a collaboration between various academic groups/institutes, such as ARB Project, ARB, SILVA rRNA database project, and List of Prokaryotic names with Standing in Nomenclature, LPSN, with the aim of assembli ...
.


Lactobacillales part 2 (continued)

Notes:
♠ Strains found at the National Center for Biotechnology Information, but not listed in the List of Prokaryotic names with Standing in Nomenclature


Uses


Probiotics

Probiotics are products aimed at delivering living, potentially beneficial, bacterial cells to the gut ecosystem of humans and other animals, whereas prebiotics are indigestible carbohydrates delivered in food to the large bowel to provide fermentable substrates for selected bacteria. Most strains used as probiotics belong to the genus '' Lactobacillus''. (Other probiotic strains used belong to the genus '' Bifidobacterium''). Probiotics have been evaluated in research studies in animals and humans with respect to antibiotic-associated diarrhea, travellers' diarrhea, pediatric diarrhea,
inflammatory bowel disease Inflammatory bowel disease (IBD) is a group of inflammation, inflammatory conditions of the colon (anatomy), colon and small intestine, Crohn's disease and ulcerative colitis being the principal types. Crohn's disease affects the small intestine a ...
, irritable bowel syndrome and
Alzheimer's disease Alzheimer's disease (AD) is a neurodegeneration, neurodegenerative disease that usually starts slowly and progressively worsens. It is the cause of 60–70% of cases of dementia. The most common early symptom is difficulty in short-term me ...
. Future applications of probiotics have been conjectured to include delivery systems for vaccines and immunoglobulins, and the treatment of different gastrointestinal diseases and vaginosis.


Foods

The quest to find food ingredients with valuable bioactive properties has encouraged interest in exopolysaccharides from LAB. Functional food products that offer health and sensory benefits beyond their nutritional composition are becoming progressively more important to the food industry. The sensory benefits of exopolysaccharides are well established, and there is evidence for the health properties that are attributable to exopolysaccharides from LAB. However, there is a wide variation in molecular structures of exopolysaccharides and the complexity of the mechanisms by which physical changes in foods and bioactive effects are elicited. Some LAB produce bacteriocins which limit pathogens by interfering with cell wall synthesis or causing pore formation in the cell membrane. Nisin, a bacteriocin produced by LAB, was first researched as a food preservative in 1951 and has since been widely commercially used in foods due to its antimicrobial activity against Gram positive bacteria. Nisin is utilized as a food additive in at least 50 countries. In addition to having antibacterial activity, LAB can inhibit fungal growth. Various LAB, largely from genus '' Lactococcus'' and '' Lactobacillus,'' suppress mycotoxigenic mold growth due to the production of anti-fungal metabolites. Furthermore, LAB have the potential to reduce the abundance of mycotoxins in foods by binding to them. In a study for postharvest food product safety conducted with 119 LAB isolated from the rhizosphere of olive trees and desert truffles, mostly within the genera of '' Enterococcus'' and ''
Weissella ''Weissella'' is a genus of gram-positive bacteria placed within the family Lactobacillaceae, formerly considered species of the ''Leuconostoc paramesenteroides'' group. The morphology of ''Weissella'' species varies from spherical or lenticula ...
'', researchers found strong antibacterial activity against ''
Stenotrophomonas maltophilia ''Stenotrophomonas maltophilia'' is an aerobic, nonfermentative, Gram-negative bacterium. It is an uncommon bacterium and human infection is difficult to treat. Initially classified as ''Bacterium bookeri'', then renamed ''Pseudomonas maltophil ...
'', '' Pantoea agglomerans'', ''
Pseudomonas savastanoi ''Pseudomonas savastanoi'' is a gram-negative plant pathogenic bacterium that infects a variety of plants. It was once considered a pathovar of ''Pseudomonas syringae,'' but following DNA-relatedness studies, it was instated as a new species. It ...
'', ''
Staphylococcus aureus ''Staphylococcus aureus'' is a Gram-positive spherically shaped bacterium, a member of the Bacillota, and is a usual member of the microbiota of the body, frequently found in the upper respiratory tract and on the skin. It is often positive ...
'' and '' Listeria monocytogenes'', and anti-fungal activity against '' Botrytis cinerea'', '' Penicillium expansum'', '' Verticillium dahliae'' and '' Aspergillus niger''.


Fertilizer

Researchers have studied the impact of lactic acid bacteria on indoleacetic acid production, phosphate solubilization, and nitrogen fixation on citrus. While most of the bacterial isolates, were able to produce IAA, phosphate-solubilization was limited to only one of the eight LAB isolates.


Fermentation

Lactic acid bacteria are used in the food industry for a variety of reasons such as the production of
cheese Cheese is a dairy product produced in wide ranges of flavors, textures, and forms by coagulation of the milk protein casein. It comprises proteins and fat from milk, usually the milk of cows, buffalo, goats, or sheep. During production, ...
and yogurt products. This process has been going on for thousands of years by human ancestors. But, some of the beverages we enjoy today are produced by using lactic acid bacteria. Popular drinks such as kombucha have known to have traces of ''lactobacillus'' and ''pediococcus'' once the drink is made. Even the beer and wine-making process utilizes certain lactic acid bacteria mostly ''lactobacillus''. The interesting relationship between lactic acid bacteria and yeast can be observed in the wine-making process. The LAB is used to start the wine-making process by starting the malolactic fermentation. After the malolactic fermentation, yeast cells are used to start the alcoholic fermentation process in grapes. The malolactic fermentation mechanism is mainly transformation of L-malic acid (dicarboxylic acid) to an lactic acid (monocarboxylic acid). This change occurs due to the presence of malolactic and malic enzymes. All malic acid are degraded and this increase the pH levels which changes the taste of the wine. Not only do they start the process but they are responsible for the different aromas produced in wine by the nutrients presence and the quality of the grapes. Also, the presence of different strains can change the desirability of aromas' presence. The different availability of enzymes that contribute to the vast spectrum of aromas in wine are associated with glycosidases, ''β''-glucosidases, esterases, phenolic acid decarboxylases and citrate lyases. By using molecular biology, researchers can help pick out different desirable strains that help improve the quality of wine and help with the removable of the undesirable strains. The same can be said about brewing beer as well which uses yeast with some breweries using lactic acid bacteria to change the taste of their beer.


Management of bacteriophages in industry

A broad number of food products, commodity chemicals, and biotechnology products are manufactured industrially by large-scale bacterial fermentation of various organic substrates. Because this involves cultivating enormous quantities of bacteria each day in large fermentation vats, a serious threat in these industries is the risk of contamination by
bacteriophage A bacteriophage (), also known informally as a ''phage'' (), is a duplodnaviria virus that infects and replicates within bacteria and archaea. The term was derived from "bacteria" and the Greek φαγεῖν ('), meaning "to devour". Bacteri ...
s, which can rapidly bring fermentations to a halt and cause economical setbacks. Areas of interest in managing this risk include the sources of phage contamination, measures to control their propagation and dissemination, and biotechnological defense strategies developed to restrain them. In the context of the food fermentation industry, the relationship between bacteriophages and their bacterial hosts is very important. The dairy fermentation industry has openly acknowledged the problem of phage contamination, and has worked for decades with academia and starter-culture manufacturers to develop defence strategies and systems to curtail phages' propagation and evolution.


Bacteriophage–host interaction

The first contact between an infecting phage and its bacterial host is the phage's attaching to the host cell. This attachment is mediated by the phage's receptor binding protein (RBP), which recognizes and binds to a receptor on the bacterial surface. RBPs are also referred to as host-specificity proteins, host determinants, and antireceptors. A variety of molecules have been suggested to act as host receptors for
bacteriophage A bacteriophage (), also known informally as a ''phage'' (), is a duplodnaviria virus that infects and replicates within bacteria and archaea. The term was derived from "bacteria" and the Greek φαγεῖν ('), meaning "to devour". Bacteri ...
s infecting LAB; among those are
polysaccharide Polysaccharides (), or polycarbohydrates, are the most abundant carbohydrates found in food. They are long chain polymeric carbohydrates composed of monosaccharide units bound together by glycosidic linkages. This carbohydrate can react with wa ...
s and (lipo) teichoic acids, as well as a single-membrane protein. A number of RBPs of LAB phages have been identified by the generation of hybrid phages with altered host ranges. These studies, however, also found additional phage proteins to be important for successful phage infection. Analysis of the crystal structure of several RBPs indicates that these proteins share a common tertiary folding, and support previous indications of the saccharide nature of the host receptor. Gram-positive LAB have a thick peptidoglycan layer, which must be traversed to inject the phage genome into the bacterial cytoplasm. Peptidoglycan-degrading enzymes are expected to facilitate this penetration, and such enzymes have been found as structural elements of a number of LAB phages.


Lactic acid bacteria and dental plaque

LAB are able to synthesize levans from
sucrose Sucrose, a disaccharide, is a sugar composed of glucose and fructose subunits. It is produced naturally in plants and is the main constituent of white sugar. It has the molecular formula . For human consumption, sucrose is extracted and refined ...
, and dextrans from glucose. Dextrans, like other
glucan A glucan is a polysaccharide derived from D-glucose, linked by glycosidic bonds. Glucans are noted in two forms: alpha glucans and beta glucans. Many beta-glucans are medically important. They represent a drug target for antifungal medications of ...
, enable bacteria to adhere to the surface of teeth, which in turn can cause tooth decay through the formation of dental plaque and production of lactic acid. While the primary bacteria responsible for tooth decay is ''
Streptococcus mutans ''Streptococcus mutans'' is a facultatively anaerobic, gram-positive coccus (round bacterium) commonly found in the human oral cavity and is a significant contributor to tooth decay. It is part of the " streptococci" (plural, non-italic lowercase ...
'', LAB do feature among the other most common oral bacteria that cause decay.


Lactic acid bacteria genera

*''
Abiotrophia ''Abiotrophia'' is a genus of lactic acid bacteria, a family in the phylum Bacillota (Bacteria). Species The genus contains 4 species of coccus shaped species, 2 are former members of the genus ''Streptococcus'', which were transferred in 1995 t ...
'' *''
Aerococcus ''Aerococcus'' is a genus in the phylum Bacillota (Bacteria). The genus was first identified in 1953 from samples of air and dust as a catalase-negative, gram-positive coccus that grew in small clusters. They were subsequently found in hospital ...
'' *''
Carnobacterium ''Carnobacterium'' is a genus of Gram-positive bacteria within the family Carnobacteriaceae. ''C. divergens'' and ''C. maltaromaticum'' are found in the wild and in food products and can grow anaerobically. These species are not known to be patho ...
'' *'' Enterococcus'' *'' Lactobacillus'' *'' Lactococcus'' *'' Leuconostoc'' *'' Oenococcus'' *'' Pediococcus'' *'' Streptococcus'' *'' Tetragenococcus'' *''
Vagococcus ''Vagococcus'' is a genus of gram-positive bacteria. They are motile or nonmotile cocci which do not form spores. The name Vagococcus comes from Latin adjective ''vagus'' meaning wandering; and the Greek noun ''coccus'' a grain or berry, ''Vagoco ...
'' *''
Weissella ''Weissella'' is a genus of gram-positive bacteria placed within the family Lactobacillaceae, formerly considered species of the ''Leuconostoc paramesenteroides'' group. The morphology of ''Weissella'' species varies from spherical or lenticula ...
''


See also

*
Gaffkaemia Gaffkaemia (gaffkemia in American English) is a bacterial disease of lobsters, caused by the Gram-positive lactic acid bacterium ''Aerococcus viridans'' var. ''homari''. Discovery Gaffkaemia was first discovered in 1947 in American lobsters (''H ...
* Malolactic fermentation * Lactic acid fermentation *
Lacto-2 RNA motif The lacto-2 RNA motif is an RNA structure that is conserved amongst bacteria within the order Lactobacillales. The motif consists of a stem-loop whose stem is interrupted by many internal loops and bulges. Nucleotide identities in many places a ...


References


Further reading

* * *


External links


Lactic Acid Bacteria at MetaMicrobe: taxonomy, facts, probiotic properties, and references
{{authority control Bacilli * Gram-positive bacteria ko:젖산균 sv:Lactobacillaceae