''Staphylothermus'' is a
genus
Genus (; : genera ) is a taxonomic rank above species and below family (taxonomy), family as used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In bino ...
of
archaea
Archaea ( ) is a Domain (biology), domain of organisms. Traditionally, Archaea only included its Prokaryote, prokaryotic members, but this has since been found to be paraphyletic, as eukaryotes are known to have evolved from archaea. Even thou ...
ns in the family
Desulfurococcaceae
Desulfurococcaceae are a family of the disc-shaped anaerobic microorganisms belonging to the order Desulfurococcales, in the domain Archaea. Members of this family are distinguished from the other family ( Pyrodictiaceae) in the order Desulfuroc ...
.
Taxonomy
Desulfurococcaceae are
anaerobic
Anaerobic means "living, active, occurring, or existing in the absence of free oxygen", as opposed to aerobic which means "living, active, or occurring only in the presence of oxygen." Anaerobic may also refer to:
*Adhesive#Anaerobic, Anaerobic ad ...
, sulfur respiring, extreme
thermophiles. Desulfurococcaceae share the same family as
Desulfurococcus. Two species of ''Staphylothermus'' have been identified: ''S. marinus'' and ''S. hellenicus''. They are both
heterotrophic
A heterotroph (; ) is an organism that cannot produce its own food, instead taking nutrition from other sources of organic carbon, mainly plant or animal matter. In the food chain, heterotrophs are primary, secondary and tertiary consumers, but ...
, anaerobic members of the domain Archea.
Cell structure
''Staphylothermus marinus'' has a unique
morphology
Morphology, from the Greek and meaning "study of shape", may refer to:
Disciplines
*Morphology (archaeology), study of the shapes or forms of artifacts
*Morphology (astronomy), study of the shape of astronomical objects such as nebulae, galaxies, ...
. When nutrient levels are low, it forms grape-like clusters that range in diameter from 0.5–1.0 mm up to 100 clusters large. At high nutrient levels, large clustered cells up to 15 μm in diameter are found. The S-layer is made of a glycoprotein called tetrabrachion. Tetrabrachion is stable at high temperatures and resistant to chemicals that typically denature proteins. Tetrabrachion is built from 92,000 kDa
polypeptides
Peptides are short chains of amino acids linked by peptide bonds. A polypeptide is a longer, continuous, unbranched peptide chain. Polypeptides that have a molecular mass of 10,000 Da or more are called proteins. Chains of fewer than twenty ami ...
forming projections that react with other tetrabrachion sub units making a lattice framework that covers the cell.
[ Tetrabrachion is resistant to heat and chemical denaturation.][ ''S. marinus'' has a circular ]chromosome
A chromosome is a package of DNA containing part or all of the genetic material of an organism. In most chromosomes, the very long thin DNA fibers are coated with nucleosome-forming packaging proteins; in eukaryotic cells, the most import ...
with 1,610 protein-coding genes and 49 RNA genes. ''Staphylothermus hellenicus'' does not have tetrabrachion in the cell wall
A cell wall is a structural layer that surrounds some Cell type, cell types, found immediately outside the cell membrane. It can be tough, flexible, and sometimes rigid. Primarily, it provides the cell with structural support, shape, protection, ...
. It is an aggregated coccus, obligate anaerobe, heterotrophic, archeon that grows 0.8–1.3 μm in diameter. It forms large aggregates with up to 50 cells and has a circular chromosome that contains 158,0347 nucleotides, 1,599 protein-coding genes and 50 RNA
Ribonucleic acid (RNA) is a polymeric molecule that is essential for most biological functions, either by performing the function itself (non-coding RNA) or by forming a template for the production of proteins (messenger RNA). RNA and deoxyrib ...
genes.
Metabolism
''Staphylothermus marinus'' and ''Staphylothermus hellenicus'' have special enzymes
An enzyme () is a protein that acts as a biological catalyst by accelerating chemical reactions. The molecules upon which enzymes may act are called substrates, and the enzyme converts the substrates into different molecules known as pro ...
called extremozymes known to work well in extremely hot or cold environments where most enzymatic reactions could not occur.[ ''Staphylothermus marinus'' and ''Staphylothermus hellenecus'' are thermophiles that have heat stable extremozymes that work at particularly high temperatures. Both organisms are sulfur dependent, extreme marine thermophiles. These archeons require sulfur for growth but can produce hydrogen if sulfur becomes limited. Staphylothermus marinus converts sulfur to ]hydrogen sulfide
Hydrogen sulfide is a chemical compound with the formula . It is a colorless chalcogen-hydride gas, and is toxic, corrosive, and flammable. Trace amounts in ambient atmosphere have a characteristic foul odor of rotten eggs. Swedish chemist ...
using these extremozymes. Hydrogen sulfide
Hydrogen sulfide is a chemical compound with the formula . It is a colorless chalcogen-hydride gas, and is toxic, corrosive, and flammable. Trace amounts in ambient atmosphere have a characteristic foul odor of rotten eggs. Swedish chemist ...
is then released as a waste product. ''Staphylothermus marinus'' contains large protein complexes that are involved in sulfur reduction. ''Staphylothermus marinus'' and ''Staphylothermus hellenicus'' use sulfur as the final electron acceptor but may use different membrane complexes in sulfur reduction. ''S. marinus'' lacks the genes for purine
Purine is a heterocyclic aromatic organic compound that consists of two rings (pyrimidine and imidazole) fused together. It is water-soluble. Purine also gives its name to the wider class of molecules, purines, which include substituted puri ...
nucleotide
Nucleotides are Organic compound, organic molecules composed of a nitrogenous base, a pentose sugar and a phosphate. They serve as monomeric units of the nucleic acid polymers – deoxyribonucleic acid (DNA) and ribonucleic acid (RNA), both o ...
biosynthesis and thus relies on environmental sources to meet its purine requirements.[Brown AM, Hoopes SL, White RH, Sarisky CA. Purine biosynthesis in archaea: variations on a theme. Biol Direct. 2011 Dec 14;6:63. doi: 10.1186/1745-6150-6-63. PMID 22168471; PMCID: PMC3261824]
Ecology
''Staphylothermus marinus'' and ''Staphylothermus hellenicus'' are classified as hyperthermophiles
A hyperthermophile is an organism that thrives in extremely hot environments—from 60 °C (140 °F) upward. An optimal temperature for the existence of hyperthermophiles is often above 80 °C (176 °F). Hyperthermophiles are of ...
preferring temperatures between 65 and 85 °C. Thermophiles live in hot water environments such as hyperthermal vents. Staphylothermus marinus has been found in the heated geothermal sediments of “ black smokers” on the ocean floor.[ The optimal growth temperature is 85–92 °C. Maximum growth temperature is 98 °C. It prefers a pH of 6.5, can grow in a pH of 4.5 to 8.5, and favors 1–3.5% NaCl concentrations. ''Staphylothermus hellenicus'' was isolated in shallow, hypothermal vents off the coast of ]Greece
Greece, officially the Hellenic Republic, is a country in Southeast Europe. Located on the southern tip of the Balkan peninsula, it shares land borders with Albania to the northwest, North Macedonia and Bulgaria to the north, and Turkey to th ...
in 1996.[ It grows at an optimum temperature of 85 °C, pH 6 and 3–4% NaCl concentrations.
]
Significance
''Staphylothermus marinus'' and ''Staphylothermus hellenicus'' are very closely related and both could be used in biotechnology
Biotechnology is a multidisciplinary field that involves the integration of natural sciences and Engineering Science, engineering sciences in order to achieve the application of organisms and parts thereof for products and services. Specialists ...
as heat-stable enzyme sources. The enzymes they contain are of the most stable known and most resistant to denaturing agents. Thermophile enzymes have been used in biotechnology to perform important procedures such as DNA polymerase
A DNA polymerase is a member of a family of enzymes that catalyze the synthesis of DNA molecules from nucleoside triphosphates, the molecular precursors of DNA. These enzymes are essential for DNA replication and usually work in groups to create t ...
chain reactions. These heat stable enzymes are also used in industrial products and processes such as biofuels
Biofuel is a fuel that is produced over a short time span from biomass, rather than by the very slow natural processes involved in the formation of fossil fuels such as oil. Biofuel can be produced from plants or from agricultural, domestic ...
and biodegradation
Biodegradation is the breakdown of organic matter by microorganisms, such as bacteria and fungi. It is generally assumed to be a natural process, which differentiates it from composting. Composting is a human-driven process in which biodegrada ...
. Biorefineries specifically use thermophiles and their enzymes to convert biomass into useful products.[ Thermophiles like ''Staphylothermus marinus'' and ''Staphylothermus hellenicus'' provide enzymes that are operable at high temperatures providing better mixing, less contamination, and better ]solubility
In chemistry, solubility is the ability of a chemical substance, substance, the solute, to form a solution (chemistry), solution with another substance, the solvent. Insolubility is the opposite property, the inability of the solute to form su ...
. Many scientists believe that thermophiles are the oldest organisms on earth and may give scientists answers to the origin of life or whether life exists in other universes.[
]
See also
* List of Archaea genera
This article lists the genera of the Archaea. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). However, in the List provided bel ...
References
Sources
* Arab, H., Volker, H., & Thomm, M., (2000). Thermococcus aegaeicus sp. nov. and Staphylothermus hellenicus sp. nov., two novel hyperthermophilic archaea isolated from geothermally heated vents off Palaeochori Bay, Milos, Greece. . International Journal of systematic and evolutionary biology, 50, 2101–2108.
* Bioinformatics Resource Portal. http://HAMAP hellinicus.mht. Retrieved April 2, 2012.
* Joint Genome Institute. http://Staphylothermus hellenicus P8, DSM 12710 - Home.mht. Retrieved April 2, 2012.
Further reading
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*
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External links
''Staphylothermus'' at Bac''Dive'' - the Bacterial Diversity Metadatabase
Archaea genera
Thermoproteota
{{Crenarchaeota-stub