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Secotioid fungi produce an intermediate fruiting body form that is between the mushroom-like hymenomycetes and the closed bag-shaped gasteromycetes, where an evolutionary process of gasteromycetation has started but not run to completion. Secotioid fungi may or may not have opening caps, but in any case they often lack the vertical geotropic orientation of the
hymenophore A hymenophore refers to the hymenium-bearing structure of a fungal fruiting body. Hymenophores can be smooth surfaces, lamellae, folds, tubes, or teeth. The term was coined by Robert Hooke Robert Hooke (; 18 July 16353 March 1703) was an ...
needed to allow the spores to be dispersed by wind, and the
basidiospores A basidiospore is a reproductive spore produced by basidiomycete fungi, a grouping that includes mushrooms, shelf fungi, rusts, and smuts. Basidiospores typically each contain one haploid nucleus that is the product of meiosis, and they are pr ...
are not forcibly discharged or otherwise prevented from being dispersed (e.g. gills completely inclosed and never exposed as in the secotioid form of ''
Lentinus tigrinus ''Lentinus tigrinus'' is a mushroom in the Polyporaceae family. It is classified as nonpoisonous. It has been reported that the mushrooms have significant antioxidant and antimicrobial activity. The caps are wide. It produces a white spore pri ...
'')—note—some mycologists do not consider a species to be secotioid unless it has lost ballistospory.


Explanation of secotioid development and gasteromycetation

Historically agarics and boletes (which bear their spores on a
hymenium The hymenium is the tissue layer on the hymenophore of a fungal fruiting body where the cells develop into basidia or asci, which produce spores. In some species all of the cells of the hymenium develop into basidia or asci, while in oth ...
of gills or tubes respectively) were classified quite separately from the gasteroid fungi, such as puff-balls and
truffles A truffle is the fruiting body of a subterranean ascomycete fungus, one of the species of the genus ''Tuber''. More than one hundred other genera of fungi are classified as truffles including '' Geopora'', '' Peziza'', '' Choiromyces'', and ' ...
, of which the spores are formed in a large mass enclosed in an outer skin. However, in spite of this apparently very great difference in form, recent mycological research, both at microscopic and molecular level has shown that sometimes species of open mushrooms are much more closely related to particular species of gasteroid fungi than they are to each other. Fungi which do not open up to let their spores be dispersed in the air, but which show a clear morphological relation to agarics or boletes, constitute an intermediate form and are called secotioid. The word is derived from the name of the genus '' Secotium'', which was defined in 1840 by
Kunze Kunz, Künz, or Kunze is a surname. Notable people with the surname include: *Kunz (singer) (Marco Kunz, born 1985), Swiss singer *Adrian Kunz (born 1967), Swiss international footballer *Alfred Kunz (Catholic priest) (1931–1998), American murder ...
for a South African example, ''S. gueinzii'', which is the type species. In the following years numerous secotioid species were added to this genus, including ones which according to modern taxonomy belong to other genera or families. On a microscopic scale, secotioid fungi do not expel their spores forcibly from the basidium; their spores are "statismospores". Like gasteroid fungi, secotioid species rely on animals such as rodents or insects to distribute their spores. It can at times be disadvantageous for a mushroom to open up and free its spores in the usual way. If this development is aborted, a secotioid form arises, perhaps to be followed eventually by an evolutionary progression to a fully gasteroid form. This type of progression is called gasteromycetation and seems to have happened several times independently starting from various genera of "normal" mushrooms. This means that the secotioid and also the gasteroid fungi are
polyphyletic A polyphyletic group is an assemblage that includes organisms with mixed evolutionary origin but does not include their most recent common ancestor. The term is often applied to groups that share similar features known as Homoplasy, homoplasies ...
. According to the paper by Thiers, in certain climates and certain seasons, it may be an advantage to remain closed, because moisture can be conserved in that way. For example, the gasteroid genus '' Hymenogaster'' has been shown to be closely related to agaric genera such as ''
Hebeloma ''Hebeloma'' is a genus of fungi in the family Hymenogastraceae. Found worldwide, it contains the poison pie or fairy cakes ''(Hebeloma crustuliniforme)'' and the ghoul fungus ''(Hebeloma aminophilum, H. aminophilum)'', from Western Australia, wh ...
'', which were formerly placed in family Cortinariaceae or Strophariaceae. This is found by DNA analysis and also indicated on a microscopic scale by the resemblance of the spores and basidia. According to a current classification system, ''Hebeloma'' now belongs to family
Hymenogastraceae The Hymenogastraceae is a family of fungi in the order Agaricales with both agaric and false-truffle shaped fruitbodies. Formerly, prior to molecular analyses, the family was restricted to the false-truffle genera. The mushroom genus '' Psilo ...
, and is considered more narrowly related to the closed '' Hymenogaster'' fungi than, for instance, to the ordinary mushrooms in genus ''
Cortinarius ''Cortinarius'' is a globally distributed genus of fungus in the family Cortinariaceae. Its members are commonly known by the names cortinar and webcap. It is suspected to be the largest genus of agarics, containing over 2,000 widespread species ...
''. A similar case is the well-known "Deceiver" mushroom '' Laccaria laccata'' which is now classified in the '' Hydnangiaceae'', ''Hydnangium'' being a gasteroid genus. It has been found that a change in a single locus of a gene of the gilled mushroom ''
Lentinus tigrinus ''Lentinus tigrinus'' is a mushroom in the Polyporaceae family. It is classified as nonpoisonous. It has been reported that the mushrooms have significant antioxidant and antimicrobial activity. The caps are wide. It produces a white spore pri ...
'' causes it to have a closed fruiting body. This suggests that the emergence of a secotioid species may not require many mutations. There is a spectrum of secotioid species ranging from the open form to the closed form in the following respects: *there may be an evident stipe, or there may be only a remnant consisting of a column of non-fertile tissue, *if there is a stipe the edge of the cap may separate from it (partially opening), or may not, *there may be recognizable gills (though oriented in all directions and very convoluted), or the fertile interior may be uniform like the
gleba Gleba (, from Latin ''glaeba, glēba'', "lump") is the fleshy spore-bearing inner mass of certain fungi such as the puffball or stinkhorn. The gleba is a solid mass of spores, generated within an enclosed area within the sporocarp. The conti ...
of gasteroid fungi, and *the spore-bearing tissue may be above ground (
epigeous Epigeal, epigean, epigeic and epigeous are biological terms describing an organism's activity above the soil surface. In botany, a seed is described as showing epigeal germination when the cotyledons of the germinating seed expand, throw off the ...
), or underground (
hypogeous Hypogeal, hypogean, hypogeic and hypogeous (; ) are biological terms describing an organism's activity below the soil surface. In botany, a seed is described as showing hypogeal germination when the cotyledons of the germinating seed remain no ...
), or partly buried. The adjective "sequestrate" is sometimes used as a general term to mean "either secotioid or gasteroid".


Examples

''
Cortinarius ''Cortinarius'' is a globally distributed genus of fungus in the family Cortinariaceae. Its members are commonly known by the names cortinar and webcap. It is suspected to be the largest genus of agarics, containing over 2,000 widespread species ...
'' is a very widespread genus of agarics, but also contains some secotioid species, such as ''C. leucocephalus'', ''C. coneae'' and ''C. cartilagineus''. '' Pholiota nubigena'' is a secotioid species found early in the year at high altitude in the western United States. It was originally assigned to '' Secotium'' and later to a more specific secotioid genus ''Nivatogastrium'', but in fact it is closely allied to '' Pholiota squarrosa'' and it has now been moved to genus '' Pholiota'' itself, although the latter consists primarily of
agaric An agaric () is a type of fungal fruiting body characterized by the presence of a pileus (cap) that is clearly differentiated from the stipe (stalk), with lamellae (gills) on the underside of the pileus. It is a type of mushroom (or toadstool) ...
s. ''
Gastroboletus ''Gastroboletus'' is a genus of fungi in the family Boletaceae. Species in the genus have misshapen pileus (mycology), caps, poorly developed or absent stipe (mycology), stipes, and are often buried or partially buried. ''Gastroboletus'' has tubes ...
'' is a secotioid
bolete A bolete is a type of mushroom, or fungal fruiting body. It can be identified thanks to a unique cap. On the underside of the cap there is usually a spongy surface with pores, instead of the gills typical of mushrooms. A similar pore surface i ...
genus where the fruiting bodies may or may not open, but in any case the tubes are not aligned vertically as in a true bolete. Secotioid mushrooms of the genus '' Endoptychum'' (such as ''E. agaricoides'', ''E. arizonicum'') have been now moved to genus '' Chlorophyllum'', closely related to ''
Macrolepiota ''Macrolepiota'' is a genus of white spored, gilled mushrooms of the family Agaricaceae. The best-known member is the parasol mushroom (''M. procera''). The widespread genus contains about 40 species. Taxonomy ''Macrolepiota'' was circu ...
''. '' Agaricus deserticola'' is a secotioid species of ''
Agaricus ''Agaricus'' is a genus of mushroom-forming fungi containing both edible and poisonous species, with over 400 members worldwide and possibly again as many disputed or newly discovered species. The genus includes the common ("button") mushroom ...
'' (the genus of common cultivated mushrooms) which at one time was placed in the genus ''Secotium''. Similarly, '' Agaricus inapertus'' was formerly known as ''Endoptychum depressum'' until
molecular A molecule is a group of two or more atoms that are held together by attractive forces known as chemical bonds; depending on context, the term may or may not include ions that satisfy this criterion. In quantum physics, organic chemistry, ...
analysis revealed it to be closely aligned with ''Agaricus''.


References

{{Reflist, refs= {{Cite journal , author-link = M. Binder & A. Bresinsky , title = Derivation of a polymorphic lineage of Gasteromycetes from boletoid ancestors , journal = Mycologia , volume = 94 , issue = 1 , pages = 85–98 , publisher = The New York Botanical Garden, Bronx. NY 10458 , location = New York , year = 2002 , url = http://www.mycologia.org/cgi/content/full/94/1/85 , doi=10.2307/3761848 , pmid=21156480, last1 = Binder , first1 = M , last2 = Bresinsky , first2 = A , jstor = 3761848 , url-access = subscription {{Cite journal , author-link = Henry S. Conard , title = The Structure and Development of Secotium agaricoides , journal = Mycologia , volume = 7 , issue = 2 , pages = 94–104 , publisher = The New York Botanical Garden, Bronx. NY 10458 , location = New York , date = March 1915 , url = http://www.mykoweb.com/systematics/literature/The%20Secotioid%20Syndrome.pdf , doi=10.2307/3753132, jstor = 3753132 , last1 = Conard , first1 = Henry S {{Cite journal , title = Historical and current perspectives in the systematics of Australian cortinarioid sequestrate (truffle-like) fungi. , journal = Australasian Mycologist , volume = 21 , issue = 3 , pages = 81–116 , year = 2002 , url = http://bugs.bio.usyd.edu.au/AustMycolSoc/Journal/2002/21_3_b.pdf {{Cite journal , author-link = David S. Hibbett et al. , title = Evolution of gilled mushrooms and puffballs inferred from ribosomal DNA sequences , journal = PNAS , volume = 94 , issue = 22 , pages = 12002–12006 , publisher = National Academy of Sciences of the United States of America , location = Washington DC , date = 1997-10-28 , doi=10.1073/pnas.94.22.12002 , pmid=9342352 , pmc=23683, last1 = Hibbett , first1 = D. S , last2 = Pine , first2 = E. M , last3 = Langer , first3 = E , last4 = Langer , first4 = G , last5 = Donoghue , first5 = M. J , bibcode = 1997PNAS...9412002H , doi-access = free {{cite journal , author1=Hibett DS , author2=Tsuneda A , author3=Shigeyuki M. , year= 1994 , title=The Secotioid Form of ''Lentinus tegrinus'':Genetics and Development of a Fungal Morphological Innovation. , journal=American Journal of Botany , volume=81 , issue=4 , pages=466–478 , doi=10.2307/2445497, jstor=2445497 For genus ''Secotium'', also see {{cite web , url=http://www.indexfungorum.org/names/NamesRecord.asp?RecordID=39251 , title=the ''Secotium'' Kunze page , work=Index Fungorum , publisher=Royal Botanic Gardens Kew , accessdate=2022-06-18 {{cite journal , vauthors=Matheny PB, Curtis JM, Hofstetter V, Aime MC, Moncalvo JM, Ge ZW, Yang ZL, Slot JC, Ammirati JF, Baroni TJ, Bougher NL, Hughes KW, Lodge DJ, Kerrigan RW, Seidl MT, Aanen DK, DeNitis M, Daniele GM, Desjardin DE, Kropp BR, Norvell LL, Parker A, Vellinga EC, Vilgalys R, Hibbett DS , title=Major clades of Agaricales: a multilocus phylogenetic overview , journal=Mycologia , volume=98 , issue=6 , year=2007 , pages=982–95 , doi=10.3852/mycologia.98.6.982 , pmid=17486974, url=https://naldc-legacy.nal.usda.gov/naldc/download.xhtml?id=349&content=PDF , url-access=subscription {{open access Se
this Mykoweb page
of ''Nivatogastrium nubigenum'', which shows rudimentary lamellae.
{{cite web , url=http://www.indexfungorum.org/Names/NamesRecord.asp?RecordID=550583 , title=the ''Pholiota nubigena'' page , work=Species Fungorum , publisher=Royal Botanic Gardens Kew , access-date=2020-05-24 To see which species of ''Secotium'' have been assigned to a new (presumably more appropriate) genus and which remain under that taxon, see {{cite web , url=https://www.speciesfungorum.org/Names/Names.asp , title=the Species Fungorum search page , work=Species Fungorum , publisher=Royal Botanic Gardens Kew , accessdate=2022-06-18 Then select "genus" and search for ''Secotium''. The following 1984 article provides a good introduction to sectioid fungi: {{Cite journal , author-link = Harry D. Thiers , title = The Secotioid Syndrome , journal = Mycologia , volume = 76 , issue = 1 , pages = 1–8 , publisher = The New York Botanical Garden, Bronx. NY 10458 , location = New York , date = January–February 1984 , url = http://www.mykoweb.com/systematics/literature/The%20Secotioid%20Syndrome.pdf , doi=10.2307/3792830, jstor = 3792830 , last1 = Thiers , first1 = Harry D {{cite journal , author1=Vellinga EC , author2=de Kok RPJ , author3=Bruns TD. , title=Phylogeny and taxonomy of ''Macrolepiota'' (Agaricaceae) , journal=Mycologia , year=2003 , volume=95 , issue=3 , pages=442–56 , url=http://www.cybertruffle.org.uk/cyberliber/59350/0095/003/0442.htm , doi=10.2307/3761886 , pmid=21156633, jstor=3761886 , url-access=subscription Mycology Fungal morphology and anatomy Mushroom types