List Of Sequenced Prokaryotic Genomes
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This list of sequenced eubacterial genomes contains most of the
eubacteria Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the ...
known to have publicly available complete
genome sequence A genome is all the genetic information of an organism. It consists of nucleotide sequences of DNA (or RNA in RNA viruses). The nuclear genome includes protein-coding genes and non-coding genes, other functional regions of the genome such as ...
s. Most of these sequences have been placed in the
International Nucleotide Sequence Database Collaboration The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences. It involves the following computerized databases: NIG's DNA Data Bank of Japan ( ...
, a public database which can be searched Search for details on specific genomes by organism name and strain. on the
web Web most often refers to: * Spider web, a silken structure created by the animal * World Wide Web or the Web, an Internet-based hypertext system Web, WEB, or the Web may also refer to: Computing * WEB, a literate programming system created by ...
. A few of the listed genomes may not be in the
INSDC The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences. It involves the following computerized databases: NIG's DNA Data Bank of Japan (J ...
database, but in other public databases. Genomes listed as "Unpublished" are in a database, but not in the
peer-reviewed Peer review is the evaluation of work by one or more people with similar competencies as the producers of the work ( peers). It functions as a form of self-regulation by qualified members of a profession within the relevant field. Peer review ...
scientific literature. For the genomes of archaea see
list of sequenced archaeal genomes This list of sequenced archaeal genomes contains all the archaea Archaea ( ) is a Domain (biology), domain of organisms. Traditionally, Archaea only included its Prokaryote, prokaryotic members, but this has since been found to be paraphyleti ...
.


Abditibacteriota


Actinomycetota The Actinomycetota (or Actinobacteria) are a diverse phylum of Gram-positive bacteria with high GC content. They can be terrestrial or aquatic. They are of great importance to land flora because of their contributions to soil systems. In soil t ...


Aquificota The ''Aquificota'' phylum (biology), phylum is a diverse collection of bacteria that live in harsh environmental settings. The name ''Aquificota'' was given to this phylum based on an early genus identified within this group, ''Aquifex'' (“wate ...


Armatimonadota


Bacteroidota The phylum (biology), phylum Bacteroidota (synonym Bacteroidetes) is composed of three large classes of Gram-negative bacteria, Gram-negative, nonsporeforming, anaerobic or aerobic, and rod-shaped bacteria that are widely distributed in the envir ...
/ Chlorobiota group


Caldisericota


Chlamydiota The Chlamydiota (synonym Chlamydiae) are a bacterial phylum and class whose members are remarkably diverse, including pathogens of humans and animals, symbionts of ubiquitous protozoa, and marine sediment forms not yet well understood. All of ...
/ Verrucomicrobiota group


Chloroflexota The Chloroflexota are a phylum of bacteria containing isolates with a diversity of phenotypes, including members that are aerobic thermophiles, which use oxygen and grow well in high temperatures; anoxygenic phototrophs, which use light for ph ...


Chrysiogenota


Cyanobacteria Cyanobacteria ( ) are a group of autotrophic gram-negative bacteria that can obtain biological energy via oxygenic photosynthesis. The name "cyanobacteria" () refers to their bluish green (cyan) color, which forms the basis of cyanobacteri ...


Deferribacterota The Deferribacteraceae are a family of gram-negative bacteria which make energy by anaerobic respiration.Huber, H., and Stetter, K.O. "Family I. ''Deferribacteraceae'' fam. nov." In: Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 1 (T ...


Deinococcota Deinococcota (synonym, Deinococcus-Thermus) is a phylum of bacteria with a single class, ''Deinococci'', that are highly resistant to environmental hazards, also known as extremophiles. These bacteria have thick cell walls that give them gram-po ...


Dictyoglomota ''Dictyoglomus'' is a genus of bacterium, given its own phylum, called the Dictyoglomerota.Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. (2020). List of Prokaryotic names with Standing in Nomenclature (LPSN) m ...


Elusimicrobiota


Fibrobacterota Fibrobacterota is a small bacterial phylum which includes many of the major rumen bacteria, allowing for the degradation of plant-based cellulose in ruminant animals. Members of this phylum were categorized in other phyla. The genus '' Fibrobact ...
/
Acidobacteriota Acidobacteriota is a phylum of Gram-negative bacteria. Its members are physiologically diverse and ubiquitous, especially in soils, but are under-represented in culture. Description Members of this phylum are physiologically diverse, and can be ...
group


Bacillota The Bacillota (synonym Firmicutes) are a phylum of bacteria, most of which have Gram-positive cell wall structure. They have round cells, called cocci (singular coccus), or rod-like forms (bacillus). A few Bacillota, such as '' Megasphaera'', ...


Fusobacteriota Fusobacteriota are obligately anaerobic non-sporeforming Gram-negative bacilli. Since the first reports in the late nineteenth century, various names have been applied to these organisms, sometimes with the same name being applied to different s ...


Gemmatimonadota The Gemmatimonadota are a phylum of bacteria established in 2003. The phylum contains two classes Gemmatimonadetes and Longimicrobia. Species The type species '' Gemmatimonas aurantiaca'' strain T-27T was isolated from activated sludge in a se ...


Nitrospirota The Nitrospirota are a phylum of bacteria. They include multiple genera such as '' Nitrospira'', the largest. History of knowledge The first member of this phylum, '' Nitrospira marina'', was discovered in 1985. The second member, '' Nitrospi ...


Planctomycetota The Planctomycetota are a phylum of widely distributed bacteria, occurring in both aquatic and terrestrial habitats. They play a considerable role in global carbon and nitrogen cycles, with many species of this phylum capable of anaerobic ammoni ...


Pseudomonadota Pseudomonadota (synonym "Proteobacteria") is a major phylum of gram-negative bacteria. Currently, they are considered the predominant phylum within the domain of bacteria. They are naturally found as pathogenic and free-living (non- parasitic) ...


Alphaproteobacteria ''Alphaproteobacteria'' or ''α-proteobacteria'', also called ''α-Purple bacteria'' in earlier literature, is a class of bacteria in the phylum '' Pseudomonadota'' (formerly "Proteobacteria"). The '' Magnetococcales'' and '' Mariprofundales'' ar ...


Betaproteobacteria ''Betaproteobacteria'' are a class of Gram-negative bacteria, and one of the six classes of the phylum '' Pseudomonadota'' (synonym Proteobacteria). Metabolism The ''Betaproteobacteria'' comprise over 75 genera and 400 species. Together, they ...


Gammaproteobacteria ''Gammaproteobacteria'' is a class of bacteria in the phylum ''Pseudomonadota'' (synonym ''Proteobacteria''). It contains about 250 genera, which makes it the most genus-rich taxon of the Prokaryotes. Several medically, ecologically, and scienti ...


Zetaproteobacteria The class Zetaproteobacteria is the sixth and most recently described class of the Pseudomonadota. Zetaproteobacteria can also refer to the group of organisms assigned to this class. The Zetaproteobacteria were originally represented by a single ...


Myxococcota

Campylobacterota Campylobacterota are a phylum of Gram-negative bacteria. Taxonomy Until the 2021 revision of bacterial taxonomy by the ICSP, the entire phylum was classified within the Proteobacteria (synonym Pseudomonadota) as the Epsilonproteobacteria and ...


Spirochaetota A spirochaete () or spirochete is a member of the phylum Spirochaetota (also called Spirochaetes ), which contains distinctive diderm (double-membrane) Gram-negative bacteria, most of which have long, helically coiled (corkscrew-shaped or ...


Synergistota The Synergistota is a phylum of anaerobic bacteria that show Gram-negative staining and have rod/vibrioid cell shape. Although Synergistota have a diderm cell envelope,Gupta, R. S. (2011) Origin of Diderm (Gram-negative) Bacteria: Antibiotic Se ...


Mycoplasmatota Mycoplasmatota is a phylum of bacteria that contains the class Mollicutes. The phylum was originally named "Tenericutes" (''tener cutis'': soft skin). Notable genera include '' Mycoplasma'', '' Spiroplasma'', '' Ureaplasma'', and ''Candidatus'' ...


Thermodesulfobacteriota The Thermodesulfobacteriota, or Desulfobacterota, are a phylum of anaerobic Gram-negative bacteria. Many representatives are sulfate-reducing bacteria, others can grow by disproportionation of various sulphur species, reduction or iron, or even u ...


Thermotogota


See also

*
Genome project Genome projects are scientific endeavours that ultimately aim to determine the complete genome sequence of an organism (be it an animal, a plant, a fungus, a bacterium, an archaean, a protist or a virus) and to annotate protein-coding genes and o ...
*
Human microbiome project The Human Microbiome Project (HMP) was a United States National Institutes of Health (NIH) research initiative to improve understanding of the microbiota involved in human health and disease. Launched in 2007, the first phase (HMP1) focused on i ...
*
List of sequenced eukaryotic genomes This list of "sequenced" eukaryotic genomes contains all the eukaryotes known to have publicly available complete nuclear and organelle genome sequences that have been sequenced, assembled, annotated and published; draft genomes are not included ...
*
List of sequenced archaeal genomes This list of sequenced archaeal genomes contains all the archaea Archaea ( ) is a Domain (biology), domain of organisms. Traditionally, Archaea only included its Prokaryote, prokaryotic members, but this has since been found to be paraphyleti ...
*
List of sequenced plastomes A plastome is the genome of a plastid, a type of organelle found in plants and in a variety of protoctists. The number of known plastid genome sequences grew rapidly in the first decade of the twenty-first century. For example, 25 chloroplast g ...


References


In silico analysis of complete bacterial genomes: PCR, AFLP–PCR and endonuclease restriction Combining diverse evidence for gene recognition in completely sequenced bacterial genomes Intragenomic heterogeneity between multiple 16S ribosomal RNA operons in sequenced bacterial genomes
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External links


BacMap
— an up-to-date electronic atlas of annotated bacterial genomes
SUPERFAMILY comparative genomics database
Includes genomes of completely sequenced prokaryotes, and sophisticated datamining plus visualisation tools for analysis {{DEFAULTSORT:List Of Sequenced Bacterial Genomes Bacterial genomes Bacterial genomes Lists of bacteria Pathogen genomics