In molecular biology the FYVE zinc finger domain is named after the four cysteine-rich
protein
Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, respon ...
s: Fab 1 (yeast orthologue of
PIKfyve), YOTB, Vac 1 (vesicle transport protein), and
EEA1, in which it has been found. FYVE domains bind
phosphatidylinositol 3-phosphate,
in a way dependent on its metal ion coordination and basic amino acids. The FYVE domain inserts into cell membranes in a pH-dependent manner.
The FYVE domain has been connected to vacuolar protein sorting and
endosome
Endosomes are a collection of intracellular sorting organelles in eukaryotic cells. They are parts of endocytic membrane transport pathway originating from the trans Golgi network. Molecules or ligands internalized from the plasma membrane c ...
function.
Structure
The FYVE domain is composed of two small
beta hairpins (or zinc knuckles) followed by an alpha helix.
The FYVE finger binds two
zinc
Zinc is a chemical element with the symbol Zn and atomic number 30. Zinc is a slightly brittle metal at room temperature and has a shiny-greyish appearance when oxidation is removed. It is the first element in group 12 (IIB) of the periodic t ...
ions. The FYVE finger has eight potential zinc coordinating cysteine positions and is characterized by having basic amino acids around the cysteines. Many members of this family also include two histidines in a sequence motif:
The FYVE finger is structurally similar to the
RING domain and the
PHD finger.
Examples
The following is a list of human proteins containing this domain:
*
ANKFY1
Ankyrin repeat and FYVE domain-containing protein 1 is a protein that in humans is encoded by the ''ANKFY1'' gene.
Function
This gene encodes a cytoplasmic protein that contains a coiled-coil structure and a BTB/POZ domain at its N-terminus, ...
,
EEA1,
FGD1
FYVE, RhoGEF and PH domain-containing protein 1 (FGD1) also known as faciogenital dysplasia 1 protein (FGDY), zinc finger FYVE domain-containing protein 3 (ZFYVE3), or Rho/Rac guanine nucleotide exchange factor FGD1 (Rho/Rac GEF) is a protein th ...
,
FGD2,
FGD3,
FGD4,
FGD5,
FGD6,
FYCO1,
HGS,
MTMR3,
MTMR4,
PIKFYVE,
PLEKHF1,
PLEKHF2
Pleckstrin homology domain-containing family F member 2 is a protein that in humans is encoded by the ''PLEKHF2'' gene
In biology, the word gene (from , ; "...Wilhelm Johannsen coined the word gene to describe the Mendelian units of heredi ...
*
RUFY1
RUN and FYVE domain-containing protein 1 is a protein that in humans is encoded by the ''RUFY1'' gene. It is named after the RUN and FYVE domains it contains.
Interactions
RUFY1 has been shown to interact
Advocates for Informed Choice, ...
,
RUFY2
RUN and FYVE domain containing 2 (RUFY2) is a protein that in humans is encoded by the ''RUFY2'' gene. The RUFY2 gene is named for two of its domains, the RUN domain and FYVE domains. RUFY2 is a member of the RUFY family of proteins that include ...
,
WDF3,
WDFY1,
WDFY2,
WDFY3,
ZFYVE1,
ZFYVE16,
ZFYVE19
Zinc finger FYVE domain-containing protein 19 is a protein that in humans is encoded by the ''ZFYVE19'' gene
In biology, the word gene (from , ; "...Wilhelm Johannsen coined the word gene to describe the Mendelian units of heredity..." mea ...
,
ZFYVE20,
ZFYVE21,
ZFYVE26
Zinc finger, FYVE domain containing 26 is a protein that in humans is encoded by the ZFYVE26 gene.
Function
This gene encodes a protein which contains a FYVE zinc finger binding domain. The presence of this domain is thought to target these pr ...
,
ZFYVE27
Zinc finger, FYVE domain containing 27 is a protein that in humans is encoded by the ZFYVE27 gene.
Function
This gene encodes a protein with several Transmembrane domains, a Rab11-binding domain and a lipid-binding FYVE finger domain. The enco ...
,
ZFYVE28,
ZFYVE9
References
Further reading
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{{DEFAULTSORT:Fyve Domain
Protein domains
Peripheral membrane proteins