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In
organic chemistry Organic chemistry is a subdiscipline within chemistry involving the science, scientific study of the structure, properties, and reactions of organic compounds and organic materials, i.e., matter in its various forms that contain carbon atoms.Clay ...
, a cyclophane is a
hydrocarbon In organic chemistry, a hydrocarbon is an organic compound consisting entirely of hydrogen and carbon. Hydrocarbons are examples of group 14 hydrides. Hydrocarbons are generally colourless and hydrophobic, and their odors are usually weak or ...
consisting of an
aromatic In chemistry, aromaticity is a chemical property of cyclic (ring-shaped), ''typically'' planar (flat) molecular structures with pi bonds in resonance (those containing delocalized electrons) that gives increased stability compared to sat ...
unit (typically a
benzene Benzene is an organic chemical compound with the molecular formula C6H6. The benzene molecule is composed of six carbon atoms joined in a planar ring with one hydrogen atom attached to each. Because it contains only carbon and hydrogen ato ...
ring) and a
chain A chain is a wikt:series#Noun, serial assembly of connected pieces, called links, typically made of metal, with an overall character similar to that of a rope in that it is flexible and curved in compression (physics), compression but line (g ...
that forms a
bridge A bridge is a structure built to span a physical obstacle (such as a body of water, valley, road, or rail) without blocking the way underneath. It is constructed for the purpose of providing passage over the obstacle, which is usually somethi ...
between two non-adjacent positions of the aromatic ring. More complex derivatives with multiple aromatic units and bridges forming cagelike structures are also known. Cyclophanes are well-studied examples of strained organic compounds.


Cyclophanes


Structures

Paracyclophanes adopt the boat conformation normally observed in
cyclohexane Cyclohexane is a cycloalkane with the molecular formula . Cyclohexane is non-polar. Cyclohexane is a colorless, flammable liquid with a distinctive detergent-like odor, reminiscent of cleaning products (in which it is sometimes used). Cyclohex ...
s. Smaller value of n lead to greater distortions.
X-ray crystallography X-ray crystallography is the experimental science determining the atomic and molecular structure of a crystal, in which the crystalline structure causes a beam of incident X-rays to diffract into many specific directions. By measuring the angle ...
on ' aracyclophane' shows that the aromatic bridgehead carbon atom makes an angle of 20.5° with the plane. The
benzyl In organic chemistry, benzyl is the substituent or molecular fragment possessing the structure . Benzyl features a benzene ring () attached to a methylene group () group. Nomenclature In IUPAC nomenclature, the prefix benzyl refers to a subst ...
carbons deviate by another 20.2°. The carbon-to-carbon bond length alternation has increased from 0 for
benzene Benzene is an organic chemical compound with the molecular formula C6H6. The benzene molecule is composed of six carbon atoms joined in a planar ring with one hydrogen atom attached to each. Because it contains only carbon and hydrogen ato ...
to 39 pm. Despite their distorted structures, cyclophanes retain their
aromaticity In chemistry, aromaticity is a chemical property of cyclic (ring-shaped), ''typically'' planar (flat) molecular structures with pi bonds in resonance (those containing delocalized electrons) that gives increased stability compared to sat ...
, as determined by UV-vis spectroscopy.


Reactivity

With regards to their reactivity, cyclophanes often exhibit diene-like behavior, despite evidence for aromaticity in even the most distorted cyclophane. This highly distorted cyclophane photochemically converts to the Dewar benzene derivative. Heat reverses the reaction. With dimethyl acetylenedicarboxylate, etacyclophane rapidly undergoes the Diels-Alder reaction. A non-bonding nitrogen to arene distance of 244 pm is recorded for a pyridinophane and in the unusual superphane the two benzene rings are separated by a mere 262 pm. Other representative of this group are in-methylcyclophanes, in-ketocyclophanes and ''in'',''in''-Bis(hydrosilane).


NMR properties

The
proton NMR Proton nuclear magnetic resonance (proton NMR, hydrogen-1 NMR, or 1H NMR) is the application of nuclear magnetic resonance in NMR spectroscopy with respect to hydrogen-1 nuclei within the molecules of a substance, in order to determine the str ...
spectra of cyclophanes have been intensively examined to gain insights into the aromaticity of the benzene ring. Also of great interest is the shielding effects of the aromatic ring on the hydrocarbon strap. Generally the aromatic protons appear near their usual positions around 7.2 ppm, indicating that even with severe distortions, the ring retains aromaticity. The central methylene protons in the aliphatic bridge are shielded to a position of around - 0.5 ppm.


Synthesis

aracyclophane can be synthesized beginning with the Bamford-Stevens reaction to form the spiro
ketone In organic chemistry, a ketone is a functional group with the structure R–C(=O)–R', where R and R' can be a variety of carbon-containing substituents. Ketones contain a carbonyl group –C(=O)– (which contains a carbon-oxygen double bon ...
1 in ''scheme 3'', rearranging in a
pyrolysis The pyrolysis (or devolatilization) process is the thermal decomposition of materials at elevated temperatures, often in an inert atmosphere. It involves a change of chemical composition. The word is coined from the Greek-derived elements ''p ...
reaction through the carbene intermediate 4. A separate route to the Dewar form involves a Ag+-induced
rearrangement reaction In organic chemistry, a rearrangement reaction is a broad class of organic reactions where the carbon skeleton of a molecule is rearranged to give a structural isomer of the original molecule. Often a substituent moves from one atom to another at ...
of the bicyclopropenyl compound 7. Metacyclophanes are generally less strained and thus more easily prepared than paracyclophanes. Shown below is the route to a 414]metaparacyclophane in ''scheme 4'' featuring a in-situ Ramberg-Bäcklund Reaction converting the sulfone 3 to the
alkene In organic chemistry, an alkene is a hydrocarbon containing a carbon–carbon double bond. Alkene is often used as synonym of olefin, that is, any hydrocarbon containing one or more double bonds.H. Stephen Stoker (2015): General, Organic, an ...
4.


Naturally occurring cyclophanes

A few cyclophanes exist in nature. One example of a metacyclophane is
cavicularin Cavicularin is a natural phenolic secondary metabolite isolated from the liverwort ''Cavicularia densa''. This macrocycle is unusual because it was the first compound isolated from nature displaying optical activity solely due to the presence o ...
. Haouamine A is a paracyclophane found in a certain species of
tunicate A tunicate is a marine invertebrate animal, a member of the subphylum Tunicata (). It is part of the Chordata, a phylum which includes all animals with dorsal nerve cords and notochords (including vertebrates). The subphylum was at one time ...
. Because of its potential application as an anticancer
drug A drug is any chemical substance that causes a change in an organism's physiology or psychology when consumed. Drugs are typically distinguished from food and substances that provide nutritional support. Consumption of drugs can be via inhal ...
it is also available from
total synthesis Total synthesis is the complete chemical synthesis of a complex molecule, often a natural product, from simple, commercially-available precursors. It usually refers to a process not involving the aid of biological processes, which distinguishes i ...
via an
alkyne \ce \ce Acetylene \ce \ce \ce Propyne \ce \ce \ce \ce 1-Butyne In organic chemistry, an alkyne is an unsaturated hydrocarbon containing at least one carbon—carbon triple bond. The simplest acyclic alkynes with only one triple bond and no ...
- pyrone Diels-Alder reaction in the crucial step with expulsion of carbon dioxide (''scheme 5''). In this compound the deviation from planarity is 13° for the benzene ring and 17° for the bridgehead carbons. An alternative cyclophane formation strategy in ''scheme 6'' was developed based on aromatization of the ring well after the formation of the bridge. Two additional types of cyclophanes were discovered in nature when they were isolated from two species of cyanobacteria from the family ''Nostocacae''. These two classes of cyclophanes are both ,7paracyclophanes and were named after the species from which they were extracted: cylindrocyclophanes from ''Cylindrospermum lichenforme'' and nostocyclophanes from ''Nostoc linckia''.


.naracyclophanes

200px, Superphane. A well studies member of the .naracyclophane family is .2aracyclophane. One method for its preparation is by a 1,6-Hofmann elimination:. The .2aracyclophane-1,9-diene has been applied in ROMP to a poly(p-phenylene vinylene) with alternating cis-alkene and trans-alkene bonds using Grubbs' second generation catalyst: The driving force for ring-opening and polymerization is strain relief. The reaction is believed to be a
living polymerization In polymer chemistry, living polymerization is a form of chain growth polymerization where the ability of a growing polymer chain to terminate has been removed. This can be accomplished in a variety of ways. Chain termination and chain transfer ...
due to the lack of competing reactions. Because the two benzene rings are in close proximity this cyclophane type also serves as guinea pig for photochemical
dimerization A dimer () (''wikt:di-, di-'', "two" + ''-mer'', "parts") is an oligomer consisting of two monomers joined by bonds that can be either strong or weak, Covalent bond, covalent or Intermolecular force, intermolecular. Dimers also have significant im ...
reactions as illustrated by this example: The product formed has an octahedrane skeleton. When the
amine In chemistry, amines (, ) are compounds and functional groups that contain a basic nitrogen atom with a lone pair. Amines are formally derivatives of ammonia (), wherein one or more hydrogen atoms have been replaced by a substituent su ...
group is replaced by a
methylene group In organic chemistry, a methylene group is any part of a molecule that consists of two hydrogen atoms bound to a carbon Carbon () is a chemical element with the symbol C and atomic number 6. It is nonmetallic and tetravalent—its atom ma ...
no reaction takes place: the dimerization requires through-bond overlap between the aromatic pi electrons and the sigma electrons in the C-N bond in the reactants LUMO.


Phanes

Generalization of cyclophanes led to the concept of phanes in the IUPAC nomenclature. The systematic phane nomenclature name for e.g. 4etacyclophane is 1(1,3)-benzenacyclopentadecaphane;
and .2'aracyclophane (or .2aracyclophane) is 1,4(1,4)-dibenzenacyclohexaphane.


See also

* Cycloparaphenylene, cyclic all-para-linked phenyl groups. *
Calixarenes A calixarene is a macrocycle or cyclic oligomer based on a methylene-linked phenols. With hydrophobic cavities that can hold smaller molecules or ions, calixarenes belong to the class of cavitands known in host–guest chemistry. Nomenclature Cal ...


General sources

* B. H. Smith, Bridged Aromatic Compounds, Academic Press, New York, 1964. * P. M. Keehn, S. M. Rosenfeld (eds.),Cyclophanes, Vols. 1 and 2, Academic Press,New York, 1983. * F. Vögtle, F., G. Hohner, Top. Curr. Chem. 1978, 74, 1 * F. Vögtle, P. Neumann, Top. Curr. Chem. 1983, 113, 1; 1985, 115, 1.


References

{{Reflist Cyclophanes