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Amorphea is a taxonomic supergroup that includes the basal
Amoebozoa Amoebozoa is a major Taxonomy (biology), taxonomic group containing about 2,400 described species of Amoeba, amoeboid protists, often possessing blunt, fingerlike, Pseudopod#Morphology, lobose pseudopods and tubular mitochondrial cristae. In trad ...
and
Obazoa Obazoa is a proposed sister clade of Amoebozoa (which together form Amorphea). The term Obazoa is based on the OBA acronym for Opisthokonta, Breviatea, and Apusomonadidae, the group's three constituent clades. Determining the placement of Bre ...
. That latter contains the
Opisthokont The opisthokonts () are a broad group of eukaryotes, including both the animal and fungus kingdoms. The opisthokonts, previously called the "Fungi/Metazoa group", are generally recognized as a clade. Opisthokonts together with Apusomonadida and ...
a, which includes the
fungi A fungus (: fungi , , , or ; or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and mold (fungus), molds, as well as the more familiar mushrooms. These organisms are classified as one ...
,
animals Animals are multicellular, eukaryotic organisms in the biological kingdom Animalia (). With few exceptions, animals consume organic material, breathe oxygen, have myocytes and are able to move, can reproduce sexually, and grow from a ...
and the
choanoflagellate Choanoflagellates are a group of free-living unicellular and colonial flagellate eukaryotes considered to be the closest living relatives of animals. The name refers to the characteristic funnel-shaped "collar" of interconnected microvilli and ...
s. The
taxonomic 280px, Generalized scheme of taxonomy Taxonomy is a practice and science concerned with classification or categorization. Typically, there are two parts to it: the development of an underlying scheme of classes (a taxonomy) and the allocation ...
affinities of the members of this
clade In biology, a clade (), also known as a Monophyly, monophyletic group or natural group, is a group of organisms that is composed of a common ancestor and all of its descendants. Clades are the fundamental unit of cladistics, a modern approach t ...
were originally described and proposed by
Thomas Cavalier-Smith Thomas (Tom) Cavalier-Smith, FRS, FRSC, NERC Professorial Fellow (21 October 1942 – 19 March 2021), was a professor of evolutionary biology in the Department of Zoology, at the University of Oxford. His research has led to discov ...
in 2002. The International Society of Protistologists, the recognised body for taxonomy of protozoa, recommended in 2012 that the term Unikont be changed to Amorphea because the name "Unikont" is based on a hypothesized
synapomorphy In phylogenetics, an apomorphy (or derived trait) is a novel Phenotypic trait, character or character state that has evolution, evolved from its ancestral form (or Plesiomorphy and symplesiomorphy, plesiomorphy). A synapomorphy is an apomorphy sh ...
that the ISOP authors and other scientists later rejected. It includes
amoebozoa Amoebozoa is a major Taxonomy (biology), taxonomic group containing about 2,400 described species of Amoeba, amoeboid protists, often possessing blunt, fingerlike, Pseudopod#Morphology, lobose pseudopods and tubular mitochondrial cristae. In trad ...
,
opisthokont The opisthokonts () are a broad group of eukaryotes, including both the animal and fungus kingdoms. The opisthokonts, previously called the "Fungi/Metazoa group", are generally recognized as a clade. Opisthokonts together with Apusomonadida and ...
s, and apusomonads.


Taxonomic revisions within this group

Thomas Cavalier-Smith Thomas (Tom) Cavalier-Smith, FRS, FRSC, NERC Professorial Fellow (21 October 1942 – 19 March 2021), was a professor of evolutionary biology in the Department of Zoology, at the University of Oxford. His research has led to discov ...
proposed two new phyla:
Sulcozoa Podiates (Cavalier-Smith, 2012, excl. Ancyromonadida) are a proposed clade containing the Amorphea (incl. Opisthokonta, Amoebozoa, apusomonads and breviates) and the organisms now assigned to the clade CRuMs. Ancyromonadida does not appear ...
, which consists of the subphyla
Apusozoa The Apusozoa are a paraphyletic phylum of flagellate eukaryotes. They are usually around 5–20 μm in size, and occur in soils and aquatic habitats, where they feed on bacteria. They are grouped together based on the presence of an organic shel ...
(
Apusomonadida The apusomonads (family Apusomonadidae) are a group of protozoan zooflagellates that glide on surfaces, and mostly consume prokaryotes. They are of particular evolutionary interest because they appear to be the sister group to the Opisthokonts ...
and
Breviatea Breviatea, commonly known as breviate amoebae, are a group of free-living, amitochondriate protists with uncertain phylogenetic position. They are biflagellate, and can live in anaerobic (oxygen-free) environments. They are currently placed in ...
), and
Varisulca Varisulca was a proposed basal Podiate taxon. It encompassed several lineages of heterotrophic protists, most notably the ancyromonads (planomonads), collodictyonids (diphylleids), rigifilids (''Rigifila'', ''Micronuclearia'') and mantamona ...
, which includes the subphyla Diphyllatea, Discocelida,
Mantamonadidae Mantamonads are a group of free-living heterotrophic flagellates that move primarily by gliding on surfaces (rather than swimming). They are classified as one genus ''Mantamonas'' in the monotypic family Mantamonadidae, order Mantamonadida, cl ...
, Planomonadida and Rigifilida. Further work by Cavalier-Smith showed that Sulcozoa is
paraphyletic Paraphyly is a taxonomic term describing a grouping that consists of the grouping's last common ancestor and some but not all of its descendant lineages. The grouping is said to be paraphyletic ''with respect to'' the excluded subgroups. In co ...
. Apusozoa also appears to be paraphyletic.
Varisulca Varisulca was a proposed basal Podiate taxon. It encompassed several lineages of heterotrophic protists, most notably the ancyromonads (planomonads), collodictyonids (diphylleids), rigifilids (''Rigifila'', ''Micronuclearia'') and mantamona ...
has been redefined to include planomonads, Mantamonas and Collodictyon. A new taxon has been created - Glissodiscea - for the planomonads and Mantamonas. Again, the validity of this revised taxonomy awaits confirmation. Amoebozoa seems to be monophyletic with two major branches:
Conosa Conosa is a grouping of Amoebozoa. It is subdivided into three groups: Archamoeba, Variosea and Mycetozoa. In some classifications, the mycetozoan Myxogastria and Dictyostelia are united in Macromycetozoa (= Eumycetozoa). Conosa includes t ...
and Lobosa. Conosa is divided into the aerobic infraphylum Semiconosia (
Mycetozoa Mycetozoa is a polyphyletic grouping of slime molds. It was originally thought to be a monophyletic clade, but in 2010 it was discovered that protostelia are a polyphyletic group within Conosa. Classification It can be divided into dictyoste ...
and
Variosea Conosa is a grouping of Amoebozoa. It is subdivided into three groups: Archamoeba, Variosea and Mycetozoa. In some classifications, the mycetozoan Myxogastria and Dictyostelia are united in Macromycetozoa (= Eumycetozoa). Conosa includes t ...
) and secondarily anaerobic
Archamoebae The Archamoebae are a group of protists originally thought to have evolved before the acquisition of mitochondria by eukaryotes. They include genera that are internal parasites or commensals of animals ('' Entamoeba'' and '' Endolimax''). A few ...
. Lobosa consists entirely of non-flagellated lobose amoebae and has been divided into two classes:
Discosea Discosea is a class of Amoebozoa, consisting of naked amoebae with a flattened, discoid body shape. Members of the group do not produce tubular or subcylindrical pseudopodia, like amoebae of the class Tubulinea. When a discosean is in motion, a ...
, which have flattened cells, and
Tubulinea The Tubulinea are a major grouping of Amoebozoa, including most of the more familiar amoebae genera like ''Amoeba'', '' Arcella'', '' Difflugia'' and '' Hartmannella''. Characteristics During locomotion most Tubulinea have a roughly cylindrica ...
, which has predominantly tube-shaped pseudopodia.


Clade

The group includes
eukaryotic The eukaryotes ( ) constitute the Domain (biology), domain of Eukaryota or Eukarya, organisms whose Cell (biology), cells have a membrane-bound cell nucleus, nucleus. All animals, plants, Fungus, fungi, seaweeds, and many unicellular organisms ...
cells that, for the most part, have a single emergent
flagellum A flagellum (; : flagella) (Latin for 'whip' or 'scourge') is a hair-like appendage that protrudes from certain plant and animal sperm cells, from fungal spores ( zoospores), and from a wide range of microorganisms to provide motility. Many pr ...
, or are amoebae with no flagella. The unikonts include
opisthokonts The opisthokonts () are a broad group of eukaryotes, including both the animal and fungus kingdoms. The opisthokonts, previously called the "Fungi/Metazoa group", are generally recognized as a clade. Opisthokonts together with Apusomonadida and ...
(
animal Animals are multicellular, eukaryotic organisms in the Biology, biological Kingdom (biology), kingdom Animalia (). With few exceptions, animals heterotroph, consume organic material, Cellular respiration#Aerobic respiration, breathe oxygen, ...
s,
fungi A fungus (: fungi , , , or ; or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and mold (fungus), molds, as well as the more familiar mushrooms. These organisms are classified as one ...
, and related forms) and
Amoebozoa Amoebozoa is a major Taxonomy (biology), taxonomic group containing about 2,400 described species of Amoeba, amoeboid protists, often possessing blunt, fingerlike, Pseudopod#Morphology, lobose pseudopods and tubular mitochondrial cristae. In trad ...
. By contrast, other well-known eukaryotic groups, which more often have two emergent flagella (although there are many exceptions), are often referred to as
bikonts A bikont ("two flagella") is any of the eukaryotic organisms classified in the group Bikonta. Many single-celled and multi-celled organisms are members of the group, and these, as well as the presumed ancestor, have two flagella. Enzymes Anothe ...
. Bikonts include
Archaeplastida The Archaeplastida (or kingdom Plantae '' sensu lato'' "in a broad sense"; pronounced ) are a major group of eukaryotes, comprising the photoautotrophic red algae (Rhodophyta), green algae, land plants, and the minor group glaucophytes. It als ...
(plants and relatives) and SAR supergroup, the
Cryptista Cryptista is a clade of alga-like eukaryotes. It is most likely related to Archaeplastida which includes plants and many algae, within the larger group Diaphoretickes. Other characteristic features of cryptophyte mtDNAs include large syntenic ...
,
Haptista Haptista is a proposed group of protists made up of centrohelids and haptophytes. Phylogenomic studies indicate that Haptista, together with ''Ancoracysta twista'', forms a sister clade to the SAR supergroup#Internal phylogeny, TSAR Supergroup (b ...
,
Telonemia Telonemia is a phylum of microscopic eukaryotes commonly known as telonemids. They are unicellular free-living flagellates with a unique combination of Cell (biology), cell structures, including a highly complex cytoskeleton unseen in other eu ...
and
Picozoa Picozoa, Picobiliphyta, Picobiliphytes, or Biliphytes are protists of a phylum of marine unicellular heterotrophic eukaryotes with a size of less than about 3 micrometers. They were formerly treated as eukaryotic algae and the smallest member of ...
.


Characteristics

The unikonts have a triple-gene fusion that is lacking in the bikonts. The three genes that are fused together in the unikonts, but not bacteria or bikonts, encode enzymes for synthesis of the
pyrimidine Pyrimidine (; ) is an aromatic, heterocyclic, organic compound similar to pyridine (). One of the three diazines (six-membered heterocyclics with two nitrogen atoms in the ring), it has nitrogen atoms at positions 1 and 3 in the ring. The oth ...
nucleotide Nucleotides are Organic compound, organic molecules composed of a nitrogenous base, a pentose sugar and a phosphate. They serve as monomeric units of the nucleic acid polymers – deoxyribonucleic acid (DNA) and ribonucleic acid (RNA), both o ...
s: carbamoyl phosphate synthase, dihydroorotase,
aspartate carbamoyltransferase Aspartate carbamoyltransferase (also known as aspartate transcarbamoylase or ATCase) catalyzes the first step in the pyrimidine biosynthetic pathway (). In '' E. coli'', the enzyme is a multi- subunit protein complex composed of 12 subunits ( ...
. This must have involved a double fusion, a rare pair of events, supporting the shared ancestry of Opisthokonta and Amoebozoa. Cavalier-Smith originally proposed that unikonts ancestrally had a single flagellum and single
basal body A basal body (synonymous with basal granule, kinetosome, and in older cytological literature with blepharoplast) is a protein structure found at the base of a eukaryotic undulipodium (cilium or flagellum). The basal body was named by Theodor Wi ...
. This is unlikely, however, as flagellated opisthokonts, as well as some flagellated Amoebozoa, including ''
Breviata ''Breviata anathema'' is a single-celled flagellate amoeboid eukaryote, previously studied under the name '' Mastigamoeba invertens''. The cell lacks mitochondria, much like the pelobionts to which the species was previously assigned, but has rem ...
'', actually have two basal bodies, as in typical 'bikonts' (even though only one is flagellated in most unikonts). This paired arrangement can also be seen in the organization of
centrioles In cell biology a centriole is a cylindrical organelle composed mainly of a protein called tubulin. Centrioles are found in most eukaryotic cells, but are not present in conifers ( Pinophyta), flowering plants ( angiosperms) and most fungi, an ...
in typical animal cells. In spite of the name of the group, the common ancestor of all 'unikonts' was probably a cell with two basal bodies.


References


External links

* Tree of Life.org {{Taxonbar, from=Q474156, from2=Q964455 Eukaryote taxa