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Methanotroph
Methanotrophs (sometimes called methanophiles) are prokaryotes that metabolize methane as their source of carbon and chemical energy. They are bacteria or archaea, can grow aerobically or anaerobically, and require single-carbon compounds to survive. Methanotrophs are especially common in or near environments where methane is produced, although some methanotrophs can oxidize atmospheric methane. Their habitats include wetlands, soils, marshes, rice paddies, landfills, aquatic systems (lakes, oceans, streams) and more. They are of special interest to researchers studying global warming, as they play a significant role in the global methane budget, by reducing the amount of methane emitted to the atmosphere. Methanotrophy is a special case of methylotrophy, using single-carbon compounds that are more reduced than carbon dioxide. Some methylotrophs, however, can also make use of multi-carbon compounds; this differentiates them from methanotrophs, which are usually fastidious ...
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Methanotroph Classification
Methanotrophs (sometimes called methanophiles) are prokaryotes that metabolize methane as their source of carbon and chemical energy. They are bacteria or archaea, can grow aerobically or anaerobically, and require single-carbon compounds to survive. Methanotrophs are especially common in or near environments where methane is produced, although some methanotrophs can oxidize atmospheric methane. Their habitats include wetlands, soils, marshes, rice paddies, landfills, aquatic systems (lakes, oceans, streams) and more. They are of special interest to researchers studying global warming, as they play a significant role in the global methane budget, by reducing the amount of methane emitted to the atmosphere. Methanotrophy is a special case of methylotrophy, using single-carbon compounds that are more reduced than carbon dioxide. Some methylotrophs, however, can also make use of multi-carbon compounds; this differentiates them from methanotrophs, which are usually fastidious me ...
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Methylocella Silvestris
''Methylocella silvestris'' is a bacterium from the genus ''Methylocella spp'' which are found in many acidic soils and wetlands. Historically, ''Methylocella silvestris'' was originally isolated from acidic forest soils in Germany, and it is described as Gram-negative, aerobic, non-pigmented, non-motile, rod-shaped and methane-oxidation, oxidizing facultative methanotroph. As an aerobic methanotrophic bacteria, ''Methylocella spp'' use methane (CH4), and methanol as their main carbon and energy source, as well as multi compounds acetate, pyruvate, succinate, malate, and ethanol. They were known to survive in the cold temperature from 4° to 30° degree of Celsius with the optimum at around 15° to 25 °C, but no more than 36 °C. They grow better in the pH scale between 4.5 and 7.0. It lacks intracytoplasmic membranes common to all methane-oxidizing bacteria except ''Methylocella'', but contain a vesicle (biology), vesicular membrane system connected to the cytoplasmic ...
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Atmospheric Methane
Atmospheric methane is the methane present in Earth's atmosphere. The concentration of atmospheric methane is increasing due to methane emissions, and is causing climate change. Methane is one of the most potent greenhouse gases. Methane's radiative forcing (RF) of climate is direct, and it is the second largest contributor to human-caused climate forcing in the historical period. Methane is a major source of water vapour in the stratosphere through oxidation; and water vapour adds about 15% to methane's radiative forcing effect. The global warming potential (GWP) for methane is about 84 in terms of its impact over a 20-year timeframe, and 28 in terms of its impact over a 100-year timeframe. See Table 8.7. Since the beginning of the Industrial Revolution (around 1750), the methane concentration in the atmosphere has increased by about 160%, and human activities almost entirely caused this increase. Since 1750 methane has contributed 3% of greenhouse gas (GHG) emissions in terms of ...
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Methylotrophy
Methylotrophs are a diverse group of microorganisms that can use redox, reduced one-carbon compounds, such as methanol or methane, as the carbon source for their growth; and multi-carbon compounds that contain no carbon-carbon bonds, such as dimethyl ether and dimethylamine. This group of microorganisms also includes those capable of assimilating reduced one-carbon compounds by way of carbon dioxide using the ribulose bisphosphate pathway. These organisms should not be confused with methanogens which on the contrary produce methane as a by-product from various one-carbon compounds such as carbon dioxide. Some methylotrophs can degrade the greenhouse gas methane, and in this case they are called methanotrophs. The abundance, purity, and low price of methanol compared to commonly used sugars make methylotrophs competent organisms for production of amino acids, vitamins, recombinant proteins, single-cell proteins, co-enzymes and cytochromes. Metabolism The key intermediate in met ...
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Methylococcaceae
The Methylococcaceae are a family of bacterium, bacteria that obtain their carbon and energy from methane, called methanotrophs.. They comprise the type I methanotrophs, in contrast to the Methylocystaceae or type II methanotrophs. They belong to Gammaproteobacteria, and are typically given their own Order (biology), order. The Methylococcaceae have internal membranes in the form of flattened discs, perpendicular to the cell wall. Methane is oxidized to give formaldehyde, which is fixed by a process called the Methylotroph#Ribulose monophosphate (RuMP) cycle, ribulose monophosphate (RuMP) cycle. Here formaldehyde is combined with sugar ribulose, producing hexulose. This, in turn, is broken down to produce glyceraldehyde, which is used to produce new ribulose and other organic compounds. Catabolism does not involve a complete citric acid cycle.George M. Garrity: ''Bergey's Manual of Systematic Bacteriology''. 2. Auflage. Springer, New York, 2005, Volume 2: ''The Proteobacteria, ...
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Methane
Methane ( , ) is a chemical compound with the chemical formula (one carbon atom bonded to four hydrogen atoms). It is a group-14 hydride, the simplest alkane, and the main constituent of natural gas. The abundance of methane on Earth makes it an economically attractive fuel, although capturing and storing it is difficult because it is a gas at standard temperature and pressure. In the Earth's atmosphere methane is transparent to visible light but absorbs infrared radiation, acting as a greenhouse gas. Methane is an Organic chemistry, organic Organic compound, compound, and among the simplest of organic compounds. Methane is also a hydrocarbon. Naturally occurring methane is found both below ground and under the seafloor and is formed by both geological and biological processes. The largest reservoir of methane is under the seafloor in the form of methane clathrates. When methane reaches the surface and the Atmosphere of Earth, atmosphere, it is known as atmospheric methane. ...
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Methylocystaceae
The Methylocystaceae are a family of bacteria that are capable of obtaining carbon and energy from methane. Such bacteria are called methanotrophs, and in particular the Methylocystaceae comprise the type II methanotrophs, which are structurally and biochemically distinct from the Methylococcaceae or type I methanotrophs. In this family methane is oxidized to form formaldehyde, which is assimilated by the serine pathway. This involves combining formaldehyde and glycine to form serine, which may be converted into glyceraldehyde and thus into other organic molecules. They can also fix nitrogen, like many other members of the order Hyphomicrobiales The Hyphomicrobiale' (synonym Rhizobiales) are an order of Gram-negative Alphaproteobacteria. The rhizobia, which fix nitrogen and are symbiotic with plant roots, appear in several different families. The four families '' Nitrobacteraceae'', ' .... The cells contained paired internal membranes which are arranged towards their perip ...
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Beijerinckiaceae
The Beijerinckiaceae are a family of Hyphomicrobiales named after the Dutch microbiologist Martinus Willem Beijerinck. '' Beijerinckia'' is a genus of free-living aerobic nitrogen-fixing bacteria. Acidotolerant ''Beijerinckiaceae'' has been shown to be the main bacterial methanol sink in a deciduous forest soil and highlights their importance for the conversion of methanol in forest soils. Together with '' Methylocystaceae'' they are alphaproteobacterial methanotroph Methanotrophs (sometimes called methanophiles) are prokaryotes that metabolize methane as their source of carbon and chemical energy. They are bacteria or archaea, can grow aerobically or anaerobically, and require single-carbon compounds to ...s. References Hyphomicrobiales Martinus Beijerinck {{Hyphomicrobiales-stub ...
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Methylocapsa Aurea
''Methylocapsa aurea'' is a Gram-negative, aerobic, non-motile bacteria from the genus of Methylocapsa which was isolated from forest soil in Germany. It is a facultative methanotroph Methanotrophs (sometimes called methanophiles) are prokaryotes that metabolize methane as their source of carbon and chemical energy. They are bacteria or archaea, can grow aerobically or anaerobically, and require single-carbon compounds to .... References External linksType strain of ''Methylocapsa aurea'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Beijerinckiaceae Bacteria described in 2010 {{Hyphomicrobiales-stub ...
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Verrucomicrobiota
Verrucomicrobiota is a phylum of Gram-negative bacteria that contains only a few described species. The species identified have been isolated from fresh water, marine and soil environments and human faeces. A number of as-yet uncultivated species have been identified in association with eukaryotic hosts including extrusive explosive ectosymbionts of protists and endosymbionts of nematodes from genus '' Xiphinema'', residing in their gametes. The verrucomicrobial bacterium ''Akkermansia muciniphila'' is a human intestinal symbiotic bacterium that is considered as a promising probiotic. Verrucomicrobiota are abundant within the environment, though relatively inactive. This phylum is considered to have two sister phyla: Chlamydiota (formerly Chlamydiae) and Lentisphaerota (formerly Lentisphaerae) within the PVC superphylum. The Verrucomicrobiota phylum can be distinguished from neighbouring phyla within the PVC group by the presence of several conserved signature indels (CSIs). Th ...
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Bacteria
Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of Prokaryote, prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit the air, soil, water, Hot spring, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria play a vital role in many stages of the nutrient cycle by recycling nutrients and the nitrogen fixation, fixation of nitrogen from the Earth's atmosphere, atmosphere. The nutrient cycle includes the decomposition of cadaver, dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, suc ...
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Formaldehyde
Formaldehyde ( , ) (systematic name methanal) is an organic compound with the chemical formula and structure , more precisely . The compound is a pungent, colourless gas that polymerises spontaneously into paraformaldehyde. It is stored as aqueous solutions (formalin), which consists mainly of the hydrate CH2(OH)2. It is the simplest of the aldehydes (). As a precursor to many other materials and chemical compounds, in 2006 the global production of formaldehyde was estimated at 12 million tons per year. It is mainly used in the production of industrial resins, e.g., for particle board and coatings. Formaldehyde also occurs naturally. It is derived from the degradation of serine, dimethylglycine, and lipids. Demethylases act by converting N-methyl groups to formaldehyde. Formaldehyde is classified as a group 1 carcinogen and can cause respiratory and skin irritation upon exposure. Forms Formaldehyde is more complicated than many simple carbon compounds in that i ...
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