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Halobacteriaceae
Halobacteriaceae is a family in the order Halobacteriales and the domain Archaea. ''Halobacteriaceae'' represent a large part of halophilic Archaea, along with members in two other methanogenic families, ''Methanosarcinaceae'' and ''Methanocalculaceae''. The family consists of many diverse genera that can survive extreme environmental niches. Most commonly, Halobacteriaceae are found in hypersaline lakes and can even tolerate sites polluted by heavy metals. They include neutrophiles, acidophiles (ex. ''Halarchaeum acidiphilum''), alkaliphiles (ex. '' Natronobacterium''), and there have even been psychrotolerant species discovered (ex. ''Hrr. lacusprofundi''). Some members have been known to live aerobically, as well as anaerobically, and they come in many different morphologies. These diverse morphologies include rods in genus Halobacterium, cocci in Halococcus, flattened discs or cups in Haloferax, and other shapes ranging from flattened triangles in Haloarcula to squares ...
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Halobacteriales
Halobacteriales are an order of the Halobacteria, found in water saturated or nearly saturated with salt. They are also called halophiles, though this name is also used for other organisms which live in somewhat less concentrated salt water. They are common in most environments where large amounts of salt, moisture, and organic material are available. Large blooms appear reddish, from the pigment bacteriorhodopsin. This pigment is used to absorb light, which provides energy to create ATP. Halobacteria also possess a second pigment, halorhodopsin, which pumps in chloride ions in response to photons, creating a voltage gradient and assisting in the production of energy from light. The process is unrelated to other forms of photosynthesis involving electron transport; however, and halobacteria are incapable of fixing carbon from carbon dioxide. Halobacteria can exist in salty environments because although they are aerobes they have a separate and different way of creating ener ...
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Halophile
A halophile (from the Greek word for 'salt-loving') is an extremophile that thrives in high salt In common usage, salt is a mineral composed primarily of sodium chloride (NaCl). When used in food, especially in granulated form, it is more formally called table salt. In the form of a natural crystalline mineral, salt is also known as r ... concentrations. In chemical terms, halophile refers to a Lewis acids and bases, Lewis acidic species that has some ability to extract halides from other chemical species. While most halophiles are classified into the domain Archaea, there are also bacterial halophiles and some Eukaryote, eukaryotic species, such as the alga ''Dunaliella salina'' and fungus ''Wallemia ichthyophaga''. Some well-known species give off a red color from carotenoid compounds, notably bacteriorhodopsin. Halophiles can be found in water bodies with salt concentration more than five times greater than that of the ocean, such as the Great Salt Lake in Utah, Owe ...
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Haloarcula
''Haloarcula'' (common abbreviation ''Har.'') is a genus of extreme halophilic Archaeon, Archaea in the class of Halobacteria. Cell structure ''Haloarcula'' species can be distinguished from other genera in the family Halobacteriaceae by the presence of specific derivatives of TGD-2 polar lipids. ''H. quadrata'' has predominantly flat, square-shaped, somewhat pleomorphic cells. Metabolism ''Haloarcula quadrata'' was first isolated when researchers were attempting to culture ''Haloquadratum walsbyi'', a haloarchaeon that was thought to be unculturable until 2004. Similar to other halophilic archaea, ''Haloarcula'' species grow optimally at 40–45 °C. Growth appears in sheets of up to 65 cells often in the shape of a square or triangle. Taxonomy The genus of ''Haloarcula'' was long grouped with other halophilic archaea such as ''Halobacterium'' until genomic analysis prompted to reorder this genus in the new family of Haloarculaceae. Phylogeny The currently accepted taxono ...
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Halophile
A halophile (from the Greek word for 'salt-loving') is an extremophile that thrives in high salt In common usage, salt is a mineral composed primarily of sodium chloride (NaCl). When used in food, especially in granulated form, it is more formally called table salt. In the form of a natural crystalline mineral, salt is also known as r ... concentrations. In chemical terms, halophile refers to a Lewis acids and bases, Lewis acidic species that has some ability to extract halides from other chemical species. While most halophiles are classified into the domain Archaea, there are also bacterial halophiles and some Eukaryote, eukaryotic species, such as the alga ''Dunaliella salina'' and fungus ''Wallemia ichthyophaga''. Some well-known species give off a red color from carotenoid compounds, notably bacteriorhodopsin. Halophiles can be found in water bodies with salt concentration more than five times greater than that of the ocean, such as the Great Salt Lake in Utah, Owe ...
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Halobacterium
''Halobacterium'' (common abbreviation ''Hbt.'') is a genus in the family Halobacteriaceae. The genus ''Halobacterium'' ("salt" or "ocean bacterium") consists of several species of Archaea with an aerobic metabolism which requires an environment with a high concentration of salt; many of their proteins will not function in low-salt environments. They grow on amino acids in their aerobic conditions. Their cell walls are also quite different from those of bacteria, as ordinary lipoprotein membranes fail in high salt concentrations. In shape, they may be either rods or cocci, and in color, either red or purple. They reproduce using binary fission (by constriction), and are motile. ''Halobacterium'' grows best in a 42 °C environment. The genome of an unspecified ''Halobacterium'' species, sequenced by Shiladitya DasSarma, comprises 2,571,010 bp (base pairs) of DNA compiled into three circular strands: one large chromosome with 2,014,239 bp, and two smaller ones with ...
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Natronorubrum
''Natronorubrum'' is a genus of archaeans in the family Halobacteriaceae. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). See also * List of Archaea genera This article lists the genera of the Archaea. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). However, in the List provided bel ... References Further reading * * * * Archaea genera Halobacteria {{archaea-stub ...
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Haloferax
''Haloferax'' (common abbreviation: ''Hfx.'') is a genus of halobacteria in the order Haloferacaceae. Genetic exchange Cells of ''H. mediterranei'' and cells of the related species '' H. volcanii'' can undergo a process of genetic exchange between two cells which involves cell fusion resulting in a heterodiploid cell (containing two different chromosomes in one cell). Although this genetic exchange ordinarily occurs between two cells of the same species, it can also occur at a lower frequency between an ''H. mediterranei'' and an ''H. volcani'' cell. These two species have an average nucleotide sequence identity of 86.6%. During this exchange process, a diploid cell is formed that contains the full genetic repertoire of both parental cells, and genetic recombination is facilitated. Subsequently, the cells separate, giving rise to recombinant cells. Taxonomy As of 2022, 13 species are validly published under the genus ''Haloferax''. ;Proposed species Several species and novel ...
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Haloquadratum
''Haloquadratum'' (common abbreviation: ''Hqr.'') is a genus of archaean, belonging to the family Haloferacaceae. The first species to be identified in this group, ''Haloquadratum walsbyi'', is unusual in that its cells are shaped like square, flat boxes. This halophilic archaean, discovered in 1980 by A.E. Walsby in the Gavish Sabkha, a coastal hypersaline pool ( sabkha) on the Sinai Peninsula in Egypt, was not cultured until 2004. The cells typically contain polyhydroxyalkanoate (PHA) granules, as well as large numbers of refractile, gas-filled vacuoles which provide buoyancy in a watery environment and may help to position the cells to maximize light-harvesting. The cells may join with others to form fragile sheets up to 40 micrometres wide. ''H. walsbyi'' can be found anywhere in hypersaline waters. When sea water evaporates, high concentration and precipitation of calcium carbonate and calcium sulfate result, leading to a hypersaline sodium chloride S ...
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Halococcus
''Halococcus'' (common abbreviation: ''Hcc.'') is a genus of archaeans in the family Halococcaceae. Ecology ''Halococcus'' is a genus of extreme halophilic archaea, meaning that they require high salt levels, sometimes as high as 32% NaCl, for optimal growth. Halophiles are found mainly in inland bodies of water with high salinity, where their pigments (from a protein called rhodopsinprotein) tint the sediment bright colors. Rhodopsinprotein and other proteins serve to protect ''Halococcus'' from the extreme salinities of their environments. Because they can function under such high-salt conditions, ''Halococcus'' and similar halophilic organisms have been used in the food industry and even in skin-care products. ''Halococcus'' is found in environments with high salt levels, mainly inland bodies of salt water, but some may be located in highly salted soil or foods. The pigmented proteins in some species cause the reddish tint found in some areas of the Dead Sea and the Great ...
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Acidophile
Acidophiles or acidophilic organisms are those that thrive under highly acidic conditions (usually at pH 5.0 or below). These organisms can be found in different branches of the Tree of life (biology), tree of life, including Archaea, Bacteria,Becker, A.Types of Bacteria Living in Acidic pH" Retrieved 10 May 2017. and Eukarya. Examples A list of these organisms includes: Archaea :* Sulfolobales, an order in the Thermoproteota branch of Archaea :* Thermoplasmatales, an order in the Euryarchaeota branch of Archaea :* ARMAN, in the Euryarchaeota branch of Archaea :* ''Acidianus brierleyi, Acidianus infernus, A. infernus'', facultatively anaerobic thermoacidophilic archaebacteria :* ''Halarchaeum acidiphilum'', acidophilic member of the Halobacteriaceae, Halobacteriacaeae :* ''Metallosphaera sedula'', thermoacidophilic Bacteria :* Acidobacteriota, a phylum of Bacterium, Bacteria :* Acidithiobacillales, an order of Pseudomonadota e.g. ''A. ferrooxidans, A. thiooxidans'' :*''Thiobacil ...
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Natronobacterium
''Natronobacterium'' is a genus of archaeans in the family the Natrialbaceae.See the NCBIbr>webpage on Natronobacterium Data extracted from the A member of the domain Archaea, it is both an extreme halophile and alkaliphile, thriving at an optimum saline concentration of 20% and optimum pH of 10. Taxonomy As of 2022, there are 2 species described in this genus. ;Proposed species * ''Natronobacterium chahanensis'' and ''Natronobacterium innemongoliae'' are proposed names for strains isolated from soda lakes in China. As of 2022, the descriptions from 1989 (''N. chahanensis'')Page ''Species: Natronobacterium chahanensis'' on and 1997 (''N. innemongoliae'')Page ''Species: Natronobacterium innemongoliae'' on are not validly published. ;Species formerly placed in this taxon. * ''Natronobacterium magadii'', now '' Natrialba magadii'' * ''Natronobacterium nitratireducens'', now '' Halobiforma nitratireducens'' * ''Natronobacterium pharaonis'', now '' Natronomonas pharaonis'' * ''N ...
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Adenosine Triphosphate
Adenosine triphosphate (ATP) is a nucleoside triphosphate that provides energy to drive and support many processes in living cell (biology), cells, such as muscle contraction, nerve impulse propagation, and chemical synthesis. Found in all known forms of life, it is often referred to as the "molecular unit of currency" for intracellular energy transfer. When consumed in a Metabolism, metabolic process, ATP converts either to adenosine diphosphate (ADP) or to adenosine monophosphate (AMP). Other processes regenerate ATP. It is also a Precursor (chemistry), precursor to DNA and RNA, and is used as a coenzyme. An average adult human processes around 50 kilograms (about 100 mole (unit), moles) daily. From the perspective of biochemistry, ATP is classified as a nucleoside triphosphate, which indicates that it consists of three components: a nitrogenous base (adenine), the sugar ribose, and the Polyphosphate, triphosphate. Structure ATP consists of three parts: a sugar, an amine base ...
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