Bergeyella Cardium
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Bergeyella Cardium
''Bergeyella'' is a rod-shaped, Gram-negative, aerobic, non-spore-forming and non-motile genus from the family of Weeksellaceae ''Weeksellaceae'' is a family in the order Flavobacteriales. It was proposed to be split from the Flavobacteriaceae in 2019, based on phylogenetic analysis. Genera The family ''Weeksellaceae'' comprises the following genera: * '' Algoriella'' Y .... References Further reading * * * * Flavobacteria Bacteria genera {{Flavobacteria-stub ...
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Bacteria
Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of Prokaryote, prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit the air, soil, water, Hot spring, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria play a vital role in many stages of the nutrient cycle by recycling nutrients and the nitrogen fixation, fixation of nitrogen from the Earth's atmosphere, atmosphere. The nutrient cycle includes the decomposition of cadaver, dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, suc ...
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Bacteroidota
The phylum (biology), phylum Bacteroidota (synonym Bacteroidetes) is composed of three large classes of Gram-negative bacteria, Gram-negative, nonsporeforming, anaerobic or aerobic, and rod-shaped bacteria that are widely distributed in the environment, including in soil, sediments, and sea water, as well as in the guts and on the skin of animals. Although some ''Bacteroides'' spp. can be Opportunistic Pathogens, opportunistic pathogens, many ''Bacteroidota'' are Symbiotic bacteria, symbiotic species highly adjusted to the gastrointestinal tract. ''Bacteroides'' are highly abundant in intestines, reaching up to 1011 cells g−1 of intestinal material. They perform metabolic conversions that are essential for the host, such as degradation of proteins or complex sugar polymers. ''Bacteroidota'' colonize the gastrointestinal tract already in infants, as non-digestible Human milk oligosaccharide, oligosaccharides in mother milk support the growth of both ''Bacteroides'' and ''Bifidoba ...
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Flavobacteriia
The class Flavobacteriia is composed of a single class of environmental bacteria. It contains the family Flavobacteriaceae, which is the largest family in the phylum Bacteroidota. This class is widely distributed in soil, fresh, and seawater habitats. The name is often spelt Flavobacteria, but was officially named Flavobacteriia in 2012. Flavobacteriia are gram-negative aerobic rods, 2–5 μm long, 0.1–0.5 μm wide, with rounded or tapered ends. They form circular cream to orange coloured colonies on agar, and are typically simple to successfully culture. Flavobacteriia is a chemoorganotroph and are known for their ability to mineralize or degrade dissolved organic matter of high molecular weight and particulate plant material. Flavobacteriia have impacts on both the environment and human society, as they are able to cause diseases in many organisms. They are important in the decomposition of organic matter and pollutants, and are key members in the formation of marin ...
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Flavobacteriales
The order Flavobacteriales comprises several families of environmental bacteria. Comparative genomics and molecular signatures ''Flavobacteriales'' is of one of the orders from the phylum ''Bacteroidota''. Comparative genomic studies have identified several conserved indels, as well as 27 proteins that are uniquely shared by different sequenced Flavobacteriales and Bacteroidota species supporting this inference. Additionally, these studies have also identified 38 proteins that seem to be specific for the species from the order ''Flavobacteriales''. Of these proteins, 26 were present in all sequenced species, while the remaining 12 were missing in only one or two species. These signature proteins provide potential molecular markers for this order. Several proteins have also been identified which are unique to the ''Flavobacteriales'' and '' Bacteroidales'' orders, indicating the species from these two orders shared a common ancestor exclusive of other ''Bacteroidota''. Phylogeny ...
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Weeksellaceae
''Weeksellaceae'' is a family in the order Flavobacteriales. It was proposed to be split from the Flavobacteriaceae in 2019, based on phylogenetic analysis. Genera The family ''Weeksellaceae'' comprises the following genera: * '' Algoriella'' Yang ''et al''. 2016 * ''Apibacter'' Kwong and Moran 2016 * '' Bergeyella'' Vandamme ''et al''. 1994 * '' Chishuiella'' Zhang ''et al''. 2014 * '' Chryseobacterium'' Vandamme ''et al''. 1994 * '' Cloacibacterium'' Allen ''et al''. 2006 * '' Cruoricaptor'' Yassin ''et al''. 2013 * '' Elizabethkingia'' Kim ''et al''. 2005 * '' Empedobacter'' (''ex'' Prévot 1961) Vandamme ''et al''. 1994 * '' Frigoriflavimonas'' Menes et al. 2022 * '' Moheibacter'' Zhang ''et al''. 2014 * '' Ornithobacterium'' Vandamme ''et al''. 1994 * '' Riemerella'' Segers ''et al''. 1993 * '' Spongiimonas'' Yoon ''et al''. 2014 * '' Wautersiella'' Kämpfer ''et al''. 2006 * '' Weeksella'' Holmes ''et al''. 1987 Phylogeny The currently accepted taxonomy is based on ...
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LPSN
List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy image:Hierarchical clustering diagram.png, 280px, Generalized scheme of taxonomy Taxonomy is a practice and science concerned with classification or categorization. Typically, there are two parts to it: the development of an underlying scheme o ... of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclature of Prokaryotes. The database was curated from 1997 to June 2013 by Jean P. Euzéby. From July 2013 to January 2020, LPSN was curated by Aidan C. Parte. In February 2020, a new version of LPSN was published as a service of the Leibniz Institute DSMZ, thereby also integrating the Prokaryotic Nomenclature Up-to-date service and since 2022 LPSN is interconnected with the Type (Strain) Genome Server (TYGS), DSMZ's high-throughput platform for accurate genome-based taxonomy. See also * Code o ...
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Species
A species () is often defined as the largest group of organisms in which any two individuals of the appropriate sexes or mating types can produce fertile offspring, typically by sexual reproduction. It is the basic unit of Taxonomy (biology), classification and a taxonomic rank of an organism, as well as a unit of biodiversity. Other ways of defining species include their karyotype, DNA sequence, morphology (biology), morphology, behaviour, or ecological niche. In addition, palaeontologists use the concept of the chronospecies since fossil reproduction cannot be examined. The most recent rigorous estimate for the total number of species of eukaryotes is between 8 and 8.7 million. About 14% of these had been described by 2011. All species (except viruses) are given a binomial nomenclature, two-part name, a "binomen". The first part of a binomen is the name of a genus to which the species belongs. The second part is called the specific name (zoology), specific name or the specific ...
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Bergeyella Cardium
''Bergeyella'' is a rod-shaped, Gram-negative, aerobic, non-spore-forming and non-motile genus from the family of Weeksellaceae ''Weeksellaceae'' is a family in the order Flavobacteriales. It was proposed to be split from the Flavobacteriaceae in 2019, based on phylogenetic analysis. Genera The family ''Weeksellaceae'' comprises the following genera: * '' Algoriella'' Y .... References Further reading * * * * Flavobacteria Bacteria genera {{Flavobacteria-stub ...
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Bergeyella Porcorum
''Bergeyella porcorum'' is a Gram-negative Gram-negative bacteria are bacteria that, unlike gram-positive bacteria, do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. Their defining characteristic is that their cell envelope consists ... bacterium from the genus Bergeyella. It has been isolated from the lungs and tonsils of pigs. References External linksType strain of ''Bergeyella porcorum'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Flavobacteria Bacteria described in 2016 {{Flavobacteria-stub ...
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Bergeyella Zoohelcum
''Bergeyella zoohelcum'' is a Gram-negative, rod-shaped, aerobic and non-motile bacterium from the genus Bergeyella which occurs in the upper respiratory tract of dogs and cats. ''Bergeyella zoohelcum'' has been associated with respiratory disease in cats and more recently in pigs. ''Bergeyella zoohelcum'' can cause infections after dog bites. Etymology The genus name ''Bergeyella'' honors American bacteriologist David Hendricks Bergey David Hendricks Bergey (1860-1937) was an American bacteriologist. He studied at University of Pennsylvania, where he obtained his Bachelor of Science and Doctor of Medicine degrees in 1884. He practiced medicine in North Wales, Pennsylvania, unti ... (1860–1937), who was instrumental in the development of bacterial taxonomy and initiated the publication of '' Bergey’s Manual of Determinative Bacteriology''. The species epithet ''zoohelcum'' is derived from Greek: ''zōion'' (ζῷον), meaning "animal", and ''helkos'' (ἕλκος), me ...
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Rod-shaped
Bacterial cellular morphologies are the shapes that are characteristic of various types of bacteria and often key to their identification. Their direct examination under a light microscope enables the classification of these bacteria (and archaea). Generally, the basic morphologies are spheres (coccus) and round-ended cylinders or rod shaped (bacillus). But, there are also other morphologies such as helically twisted cylinders (example '' Spirochetes''), cylinders curved in one plane (selenomonads) and unusual morphologies (the square, flat box-shaped cells of the Archaean genus '' Haloquadratum)''. Other arrangements include pairs, tetrads, clusters, chains and palisades. Types Coccus A coccus (plural ''cocci'', from the Latin ''coccinus'' (scarlet) and derived from the Greek ''kokkos'' (berry)), is any microorganism (usually bacteria) whose overall shape is spherical or nearly spherical. Coccus refers to the shape of the bacteria and can contain multiple genera, such as s ...
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Gram-negative
Gram-negative bacteria are bacteria that, unlike gram-positive bacteria, do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. Their defining characteristic is that their cell envelope consists of a thin peptidoglycan cell wall sandwiched between an inner ( cytoplasmic) membrane and an outer membrane. These bacteria are found in all environments that support life on Earth. Within this category, notable species include the model organism '' Escherichia coli'', along with various pathogenic bacteria, such as '' Pseudomonas aeruginosa'', '' Chlamydia trachomatis'', and '' Yersinia pestis''. They pose significant challenges in the medical field due to their outer membrane, which acts as a protective barrier against numerous antibiotics (including penicillin), detergents that would normally damage the inner cell membrane, and the antimicrobial enzyme lysozyme produced by animals as part of their innate immune system. Furthe ...
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