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Aurantimonadaceae
The ''Aurantimonadaceae'' are a small family of marine bacteria. Notable Species ''Aurantimonas coralicida'' causes a white plague in corals. ''Fulvimarina pelagi'' was isolated from seawater, and takes the form of nonmotile rods. ''Fulvimarina pelagi'' is an obligate aerobe, and obtains its nourishment chemoheterotrophically. It tests positive for oxidase and catalase, and contains carotenoid pigments, possibly to protect against solar radiation. Etymology The name ''Aurantimonas'' derives from: Neo-Latin ''aurantus'', orange-coloured; Ancient Greek language, Greek -monas, ''monas'' (μονάς), a unit; to mean an orange-coloured unicellular organism. Members of the genus ''Aurantimonas'' can be referred to as aurantimonads (''viz.'' Bacterial taxonomy#Vernacular names, trivialisation of names). Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN). The phylogeny is based on whole-genome analysis. Referen ...
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Jiella (bacterium)
''Jiella'' is a genus of bacteria from the family of Aurantimonadaceae The ''Aurantimonadaceae'' are a small family of marine bacteria. Notable Species ''Aurantimonas coralicida'' causes a white plague in corals. ''Fulvimarina pelagi'' was isolated from seawater, and takes the form of nonmotile rods. ''Fulvimarina ... with one known species ('' Jiella aquimaris''). References Monotypic bacteria genera Hyphomicrobiales Bacteria genera {{Hyphomicrobiales-stub ...
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Devosiaceae
''Devosiaceae'' is a family of Alphaproteobacteria. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclatu ... (LPSN). The phylogeny is based on whole-genome analysis. References Hyphomicrobiales Bacteria families {{Hyphomicrobiales-stub ...
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Fulvimarina
''Fulvimarina'' is a genus of bacteria from the family of Aurantimonadaceae The ''Aurantimonadaceae'' are a small family of marine bacteria. Notable Species ''Aurantimonas coralicida'' causes a white plague in corals. ''Fulvimarina pelagi'' was isolated from seawater, and takes the form of nonmotile rods. ''Fulvimarina .... References Hyphomicrobiales Bacteria genera {{Hyphomicrobiales-stub ...
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-monas
The suffix -monas is used in microbiology for many genera and is intended to mean "unicellular organism". Meaning The suffix -monas found in many genera in microbiology is similar in usage to -bacter, -bacillus, -coccus or -spirillum. The genera with the suffix are not a monophyletic group and the suffix is chosen over -bacter, often simply out of stylistic preferences to match with Greek words. The first genus to be given the suffix -monas was ''Pseudomonas'', a genus of gammaproteobacteria. The generic epithet ''Pseudomonas'' was coined by Walter Migula in 1894, who did not give an etymology.Migula, W. (1900) System der Bakterien, Vol. 2. Jena, Germany: Gustav Fischer. Since the 7th edition of Bergey's manual (=top authority in bacterial nomenclature), other authors have given the etymology to be: Greek (, false) and (, single unit or monad), which can mean "false unit". However, "false unit" conceptually does not make much sense, namely, it does not mean "an organism which ...
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Aurantimonas
''Aurantimonas'' is a genus of bacteria from the family of Aurantimonadaceae The ''Aurantimonadaceae'' are a small family of marine bacteria. Notable Species ''Aurantimonas coralicida'' causes a white plague in corals. ''Fulvimarina pelagi'' was isolated from seawater, and takes the form of nonmotile rods. ''Fulvimarina .... References Hyphomicrobiales Bacteria genera {{Hyphomicrobiales-stub ...
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Catalase
Catalase is a common enzyme found in nearly all living organisms exposed to oxygen (such as bacteria, plants, and animals) which catalyzes the decomposition of hydrogen peroxide to water and oxygen. It is a very important enzyme in protecting the cell from oxidative damage by reactive oxygen species (ROS). Catalase has one of the highest turnover numbers of all enzymes; one catalase molecule can convert millions of hydrogen peroxide molecules to water and oxygen each second. Catalase is a tetramer of four polypeptide chains, each over 500 amino acids long. It contains four iron-containing heme groups that allow the enzyme to react with hydrogen peroxide. The optimum pH for human catalase is approximately 7, and has a fairly broad maximum: the rate of reaction does not change appreciably between pH 6.8 and 7.5. The pH optimum for other catalases varies between 4 and 11 depending on the species. The optimum temperature also varies by species. Structure Human catalase for ...
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Outgroup (cladistics)
In cladistics or phylogenetics, an outgroup is a more distantly related group of organisms that serves as a reference group when determining the evolutionary relationships of the ingroup, the set of organisms under study, and is distinct from sociological outgroups. Character states present in the ingroup but absent in the outgroup are (often) synapomorphies that provide empirical support for the inferred monophyly of the ingroup; character states that are present in the outgroup and some members of the ingroup are symplesiomorphies, and their complementary synapomorphies shared among some members of the ingroup provide hypotheses of relationship within the ingroup clade. The outgroup is used as a point of comparison for the ingroup and specifically allows for the phylogeny to be rooted. Because the polarity (direction) of character change can be determined only on a rooted phylogeny, the choice of outgroup is essential for understanding the evolution of traits along a phylogeny. ...
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Bacterial Taxonomy
Bacterial taxonomy is subfield of taxonomy devoted to the classification of bacteria specimens into taxonomic ranks. Archaeal taxonomy are governed by the same rules. In the scientific classification established by Carl Linnaeus, each species is assigned to a genus resulting in a two-part name. This name denotes the two lowest levels in a hierarchy of ranks, increasingly larger groupings of species based on common traits. Of these ranks, domains are the most general level of categorization. Presently, scientists classify all life into just three domains, Eukaryotes, Bacteria and Archaea. Bacterial taxonomy is the classification of strains within the domain Bacteria into hierarchies of similarity. This classification is similar to that of plants, mammals, and other taxonomies. However, biologists specializing in different areas have developed differing taxonomic conventions over time. For example, bacterial taxonomists name types based on descriptions of strains. Zoologists am ...
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Ancient Greek Language
Ancient Greek (, ; ) includes the forms of the Greek language used in ancient Greece and the classical antiquity, ancient world from around 1500 BC to 300 BC. It is often roughly divided into the following periods: Mycenaean Greek (), Greek Dark Ages, Dark Ages (), the Archaic Greece, Archaic or Homeric Greek, Homeric period (), and the Classical Greece, Classical period (). Ancient Greek was the language of Homer and of fifth-century Athens, fifth-century Athenian historians, playwrights, and Ancient Greek philosophy, philosophers. It has contributed many words to English vocabulary and has been a standard subject of study in educational institutions of the Western world since the Renaissance. This article primarily contains information about the Homeric Greek, Epic and Classical periods of the language, which are the best-attested periods and considered most typical of Ancient Greek. From the Hellenistic period (), Ancient Greek was followed by Koine Greek, which is regar ...
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Neo-Latin
Neo-LatinSidwell, Keith ''Classical Latin-Medieval Latin-Neo Latin'' in ; others, throughout. (also known as New Latin and Modern Latin) is the style of written Latin used in original literary, scholarly, and scientific works, first in Italy during the Italian Renaissance of the fourteenth and fifteenth centuries, and then across northern Europe after about 1500, as a key feature of the humanist movement. Through comparison with Classical Latin, Latin of the Classical period, scholars from Petrarch onwards promoted a standard of Latin closer to that of the ancient Romans, especially in grammar, style, and spelling. The term ''Neo-Latin'' was however coined much later, probably in Germany in the late eighteenth century, as ''Neulatein'', spreading to French and other languages in the nineteenth century. Medieval Latin had diverged quite substantially from the classical standard and saw notable regional variation and influence from vernacular languages. Neo-Latin attempts to retur ...
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Carotenoid
Carotenoids () are yellow, orange, and red organic pigments that are produced by plants and algae, as well as several bacteria, archaea, and fungi. Carotenoids give the characteristic color to pumpkins, carrots, parsnips, corn, tomatoes, canaries, flamingos, salmon, lobster, shrimp, and daffodils. Over 1,100 identified carotenoids can be further categorized into two classes xanthophylls (which contain oxygen) and carotenes (which are purely hydrocarbons and contain no oxygen). All are derivatives of tetraterpenes, meaning that they are produced from 8 isoprene units and contain 40 carbon atoms. In general, carotenoids absorb wavelengths ranging from 400 to 550 nanometers (violet to green light). This causes the compounds to be deeply colored yellow, orange, or red. Carotenoids are the dominant pigment in autumn leaf coloration of about 15-30% of tree species, but many plant colors, especially reds and purples, are due to polyphenols. Carotenoids serve two key roles in p ...
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