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Alcaligenes Aquatilis
''Alcaligenes aaquatilis'' is a Gram-negative, catalase- and cytochrome oxidase-positive, motile bacterium with peritrichous flagella A flagellum (; ) is a hairlike appendage that protrudes from certain plant and animal sperm cells, and from a wide range of microorganisms to provide motility. Many protists with flagella are termed as flagellates. A microorganism may have f ..., from the genus '' Alcaligenes'', which was isolated in Germany from sediments of the Weser Estuary and in Shem Creek in Charleston Harbor in the United States from a salt marsh. A complete genome sequence of ''A. aquatilis'' is publicly available in DNA Data Bank of Japan, European Nucleotide Archive, and GenBank. References External links [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic re ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Flagella
A flagellum (; ) is a hairlike appendage that protrudes from certain plant and animal sperm cells, and from a wide range of microorganisms to provide motility. Many protists with flagella are termed as flagellates. A microorganism may have from one to many flagella. A gram-negative bacterium ''Helicobacter pylori'' for example uses its multiple flagella to propel itself through the mucus lining to reach the stomach epithelium, where it may cause a gastric ulcer to develop. In some bacteria the flagellum can also function as a sensory organelle, being sensitive to wetness outside the cell. Across the three domains of Bacteria, Archaea, and Eukaryota the flagellum has a different structure, protein composition, and mechanism of propulsion but shares the same function of providing motility. The Latin word means "whip" to describe its lash-like swimming motion. The flagellum in archaea is called the archaellum to note its difference from the bacterial flagellum. Eukary ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
European Nucleotide Archive
The European Nucleotide Archive (ENA) is a repository providing free and unrestricted access to annotated DNA and RNA sequences. It also stores complementary information such as experimental procedures, details of sequence assembly and other metadata related to sequencing projects. The archive is composed of three main databases: the Sequence Read Archive, the Trace Archive and the EMBL Nucleotide Sequence Database (also known as EMBL-bank). The ENA is produced and maintained by the European Bioinformatics Institute and is a member of the International Nucleotide Sequence Database Collaboration (INSDC) along with the DNA Data Bank of Japan and GenBank. The ENA has grown out of the EMBL Data Library which was released in 1982 as the first internationally supported resource for nucleotide sequence data. As of early 2012, the ENA and other INSDC member databases each contained complete genomes of 5,682 organisms and sequence data for almost 700,000. Moreover, the volume of data i ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
DNA Data Bank Of Japan
The DNA Data Bank of Japan (DDBJ) is a biological database that collects DNA sequences. It is located at the National Institute of Genetics (NIG) in the Shizuoka prefecture of Japan. It is also a member of the International Nucleotide Sequence Database Collaboration or INSDC. It exchanges its data with European Molecular Biology Laboratory at the European Bioinformatics Institute and with GenBank at the National Center for Biotechnology Information on a daily basis. Thus these three databanks contain the same data at any given time. History DDBJ began data bank activities in 1987 at NIG and remains the only nucleotide sequence data bank in Asia.Sagar AryaNucleotide sequences database22 February 2019 ''microbenotes.com'' accessed 26 March 2021 Organisation Although DDBJ mainly receives its data from Japanese researchers, it can accept data from contributors from any other country. DDBJ is primarily funded by the Japanese Ministry of Education, Culture, Sports, Science and Techn ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
International Journal Of Systematic And Evolutionary Microbiology
The ''International Journal of Systematic and Evolutionary Microbiology'' is a peer-reviewed scientific journal covering research in the field of microbial systematics that was established in 1951. Its scope covers the taxonomy, nomenclature, identification, characterisation, culture preservation, phylogeny, evolution, and biodiversity of all microorganisms, including prokaryotes, yeasts and yeast-like organisms, protozoa and algae. The journal is currently published monthly by the Microbiology Society. An official publication of the International Committee on Systematics of Prokaryotes (ICSP) and of the International Union of Microbiological Societies (Bacteriology and Applied Microbiology Division), the journal is the single official international forum for the publication of new species names for prokaryotes. [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Salt Marsh
A salt marsh or saltmarsh, also known as a coastal salt marsh or a tidal marsh, is a coastal ecosystem in the upper coastal intertidal zone between land and open saltwater or brackish water that is regularly flooded by the tides. It is dominated by dense stands of salt-tolerant plants such as herbs, grasses, or low shrubs. These plants are terrestrial in origin and are essential to the stability of the salt marsh in trapping and binding sediments. Salt marshes play a large role in the aquatic food web and the delivery of nutrients to coastal waters. They also support terrestrial animals and provide coastal protection. Salt marshes have historically been endangered by poorly implemented coastal management practices, with land reclaimed for human uses or polluted by upstream agriculture or other industrial coastal uses. Additionally, sea level rise caused by climate change is endangering other marshes, through erosion and submersion of otherwise tidal marshes. However, r ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Charleston Harbor
The Charleston Harbor is an inlet (8 sq mi/20.7 km²) of the Atlantic Ocean at Charleston, South Carolina. The inlet is formed by the junction of Ashley and Cooper rivers at . Morris and Sullivan's Islands shelter the entrance. Charleston Harbor forms part of the Intracoastal Waterway. History The harbor contains Fort Sumter, the site of the first shots of the American Civil War. Charleston Harbor was also the site of the first successful submarine attack in history on February 17, 1864, when the ''H.L. Hunley'' made a daring night attack on the USS ''Housatonic'', during the American Civil War. The 12-foot natural depth of the harbor was a major reason for the establishment and growth of Charleston. The Rivers and Harbors Act of 1852 authorized the federal government to dredge the channels of the harbor to a depth of 17 feet. This deepening work was interrupted by the Civil War A civil war or intrastate war is a war between organized groups within the ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Shem Creek
Shem (; he, שֵׁם ''Šēm''; ar, سَام, Sām) ''Sḗm''; Ge'ez: ሴም, ''Sēm'' was one of the sons of Noah in the book of Genesis and in the book of Chronicles, and the Quran. The children of Shem were Elam, Ashur, Arphaxad, Lud and Aram, in addition to unnamed daughters. Abraham, the patriarch of Jews, Christians, and Muslims, was one of the descendants of Arphaxad. Islamic literature describes Shem as one of the believing sons of Noah. Some sources even identify Shem as a prophet in his own right and that he was the next prophet after his father. Shem is mentioned several times in Genesis 5-11 as well as 1 Chronicles 1:4. In the Bible Genesis 10 Genesis 10:21 refers to relative ages of Shem and his brother Japheth, but with sufficient ambiguity to have yielded different English translations. The verse is translated in the King James Version as: "Unto Shem also, the father of all the children of Eber, the brother of Japheth the elder, even to him w ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Weser Estuary
The Weser () is a river of Lower Saxony in north-west Germany. It begins at Hannoversch Münden through the confluence of the Werra and Fulda. It passes through the Hanseatic city of Bremen. Its mouth is further north against the ports of Bremerhaven and Nordenham. The latter is on the Butjadingen Peninsula. It then merges into the North Sea via two highly saline, estuarine mouths. It connects to the canal network running east-west across the North German Plain. The river, when combined with the Werra (a dialectal form of "Weser"), is long and thus, the longest river entirely situated within Germany (the Main, however, is the longest if the Weser and Werra are not combined). The Weser itself is long. The Werra rises in Thuringia, the German state south of the main projection (tongue) of Lower Saxony. Etymology "Weser" and "Werra" are the same words in different dialects. The difference reflects the old linguistic border between Central and Low German, passing through Ha ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Bacterium
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic r ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Pseudomonadota
Pseudomonadota (synonym Proteobacteria) is a major phylum of Gram-negative bacteria. The renaming of phyla in 2021 remains controversial among microbiologists, many of whom continue to use the earlier names of long standing in the literature. The phylum Proteobacteria includes a wide variety of pathogenic genera, such as '' Escherichia'', '' Salmonella'', '' Vibrio'', '' Yersinia'', '' Legionella'', and many others.Slonczewski JL, Foster JW, Foster E. Microbiology: An Evolving Science 5th Ed. WW Norton & Company; 2020. Others are free-living (non parasitic) and include many of the bacteria responsible for nitrogen fixation. Carl Woese established this grouping in 1987, calling it informally the "purple bacteria and their relatives". Because of the great diversity of forms found in this group, it was later informally named Proteobacteria, after Proteus, a Greek god of the sea capable of assuming many different shapes (not after the Proteobacteria genus ''Proteus''). In 2021 the In ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Cytochrome Oxidase
The enzyme cytochrome c oxidase or Complex IV, (was , now reclassified as a translocasEC 7.1.1.9 is a large transmembrane protein complex found in bacteria, archaea, and mitochondria of eukaryotes. It is the last enzyme in the respiratory electron transport chain of cells located in the membrane. It receives an electron from each of four cytochrome c molecules and transfers them to one oxygen molecule and four protons, producing two molecules of water. In addition to binding the four protons from the inner aqueous phase, it transports another four protons across the membrane, increasing the transmembrane difference of proton electrochemical potential, which the ATP synthase then uses to synthesize ATP. Structure The complex The complex is a large integral membrane protein composed of several metal prosthetic sites and 14 protein subunits in mammals. In mammals, eleven subunits are nuclear in origin, and three are synthesized in the mitochondria. The complex contains ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
