Tomviz on:
[Wikipedia]
[Google]
[Amazon]
tomviz is an 
{{Image processing software
3D graphics software
3D imaging
Data and information visualization software
Image processing software
Graphics software
Physics software
Science software
open source
Open source is source code that is made freely available for possible modification and redistribution. Products include permission to use and view the source code, design documents, or content of the product. The open source model is a decentrali ...
software platform for reproducible volumetric visualization and data processing. The platform is designed for a wide range scientific applications but is especially tailored to high-resolution electron tomography Electron tomography (ET) is a tomography technique for obtaining detailed 3D structures of sub-cellular, macro-molecular, or materials specimens. Electron tomography is an extension of traditional transmission electron microscopy and uses a trans ...
, with features that allow alignment and reconstruction of nanoscale materials. The tomviz platform allows graphical analysis of 3D datasets, but also comes packaged with Python, NumPy
NumPy (pronounced ) is a library for the Python programming language, adding support for large, multi-dimensional arrays and matrices, along with a large collection of high-level mathematical functions to operate on these arrays. The predeces ...
, and SciPy
SciPy (pronounced "sigh pie") is a free and open-source Python library used for scientific computing and technical computing.
SciPy contains modules for optimization, linear algebra, integration, interpolation, special functions, fast Fourier ...
tools to allow advanced data processing and analysis. Current version is 1.10.0.
In 2022 the tomviz platform was used to enable 3D visualization of specimens during an electron or cryo-electron tomography experiment. Tomviz is built with multi-threaded data analysis pipeline runs dynamic visualizations that update as new data is collected or reconstruction algorithms proceed. Scientists can interactively analyse 3D specimen structure concurrent with a tomographic reconstruction after or during an experiment.
References