Second-harmonic imaging microscopy (SHIM) is based on a
nonlinear optical effect known as
second-harmonic generation (SHG). SHIM has been established as a viable
microscope imaging contrast mechanism for visualization of
cell and
tissue structure and function. A second-harmonic microscope obtains contrasts from variations in a specimen's ability to generate second-harmonic light from the incident light while a conventional optical microscope obtains its contrast by detecting variations in
optical density
Absorbance is defined as "the logarithm of the ratio of incident to transmitted radiant power through a sample (excluding the effects on cell walls)". Alternatively, for samples which scatter light, absorbance may be defined as "the negative lo ...
, path length, or
refractive index of the specimen. SHG requires intense
laser light passing through a material with a
noncentrosymmetric molecular structure, either inherent or induced externally, for example by an electric field.
Second-harmonic light emerging from an SHG material is exactly half the wavelength (frequency doubled) of the light entering the material. While
two-photon-excited fluorescence (TPEF) is also a two photon process, TPEF loses some energy during the relaxation of the excited state, while SHG is energy conserving. Typically, an inorganic crystal is used to produce SHG light such as
lithium niobate (LiNbO
3),
potassium titanyl phosphate (KTP = KTiOPO
4), and
lithium triborate (LBO = LiB
3O
5). Though SHG requires a material to have specific molecular orientation in order for the incident light to be frequency doubled, some biological materials can be highly polarizable, and assemble into fairly ordered, large noncentrosymmetric structures. While some biological materials such as collagen,
microtubules, and muscle
myosin
Myosins () are a superfamily of motor proteins best known for their roles in muscle contraction and in a wide range of other motility processes in eukaryotes. They are ATP-dependent and responsible for actin-based motility.
The first myosin ...
can produce SHG signals, even water can become ordered and produce second-harmonic signal under certain conditions, which allows SH microscopy to image surface potentials without any labeling molecules.
The SHG pattern is mainly determined by the phase matching condition. A common setup for an SHG imaging system will have a
laser scanning microscope with a
titanium sapphire mode-locked laser as the excitation source. The SHG signal is propagated in the forward direction. However, some experiments have shown that objects on the order of about a tenth of the
wavelength of the SHG produced signal will produce nearly equal forward and backward signals.
Advantages
SHIM offers several advantages for live cell and tissue imaging.
SHG does not involve the excitation of molecules like other techniques such as
fluorescence microscopy therefore, the molecules shouldn't suffer the effects of
phototoxicity or
photobleaching. Also, since many biological structures produce strong SHG signals, the labeling of molecules with
exogenous probes is not required which can also alter the way a biological system functions. By using
near infrared wavelengths for the incident light, SHIM has the ability to construct
three-dimensional images of specimens by imaging deeper into thick tissues.
Difference and complementarity with two-photon fluorescence (2PEF)
Two-photons
fluorescence (
2PEF) is a very different process from
SHG: it involves excitation of electrons to higher energy levels, and subsequent de-excitation by photon emission (unlike SHG, although it is also a 2-photon process). Thus,
2PEF is a non
coherent process, spatially (emitted isotropically) and temporally (broad, sample-dependent spectrum). It is also not specific to certain structure, unlike SHG.
It can therefore be coupled to SHG in multiphoton imaging to reveal some molecules that do produce
autofluorescence, like
elastin
Elastin is a protein that in humans is encoded by the ''ELN'' gene. Elastin is a key component of the extracellular matrix in gnathostomes (jawed vertebrates). It is highly elastic and present in connective tissue allowing many tissues in the bod ...
in tissues (while SHG reveals
collagen
Collagen () is the main structural protein in the extracellular matrix found in the body's various connective tissues. As the main component of connective tissue, it is the most abundant protein in mammals, making up from 25% to 35% of the whole ...
or
myosin
Myosins () are a superfamily of motor proteins best known for their roles in muscle contraction and in a wide range of other motility processes in eukaryotes. They are ATP-dependent and responsible for actin-based motility.
The first myosin ...
for instance).
History
Before SHG was used for imaging, the first demonstration of SHG was performed in 1961 by P. A. Franken, G. Weinreich, C. W. Peters, and A. E. Hill at the University of Michigan, Ann Arbor using a quartz sample. In 1968, SHG from interfaces was discovered by Bloembergen and has since been used as a tool for characterizing surfaces and probing interface dynamics. In 1971, Fine and Hansen reported the first observation of SHG from biological tissue samples. In 1974, Hellwarth and Christensen first reported the integration of SHG and microscopy by imaging SHG signals from polycrystalline
ZnSe
Zinc selenide (ZnSe) is a light-yellow, solid compound comprising zinc (Zn) and selenium (Se). It is an intrinsic semiconductor with a band gap of about 2.70 eV at . ZnSe rarely occurs in nature, and is found in the mineral that was named af ...
. In 1977,
Colin Sheppard
Colin Sheppard, usually cited as C. J. R. Sheppard, is senior scientist at the Italian Institute of Technology, Genoa, Italy. Previously, he was professor in the Department of Bioengineering and Faculty of Engineering for National University of ...
imaged various SHG crystals with a scanning optical microscope. The first biological imaging experiments were done by Freund and Deutsch in 1986 to study the orientation of
collagen
Collagen () is the main structural protein in the extracellular matrix found in the body's various connective tissues. As the main component of connective tissue, it is the most abundant protein in mammals, making up from 25% to 35% of the whole ...
fibers in
rat
Rats are various medium-sized, long-tailed rodents. Species of rats are found throughout the order Rodentia, but stereotypical rats are found in the genus ''Rattus''. Other rat genera include ''Neotoma'' ( pack rats), ''Bandicota'' (bandicoot ...
tail
tendon.
In 1993, Lewis examined the second-harmonic response of styryl
dye
A dye is a colored substance that chemically bonds to the substrate to which it is being applied. This distinguishes dyes from pigments which do not chemically bind to the material they color. Dye is generally applied in an aqueous solution an ...
s in
electric field
An electric field (sometimes E-field) is the physical field that surrounds electrically charged particles and exerts force on all other charged particles in the field, either attracting or repelling them. It also refers to the physical field fo ...
s. He also showed work on imaging live cells. In 2006,
Goro Mizutani Goro may refer to:
Places
Benin
* Goro, Benin, an arrondissement in the Commune of Tchaourou, Borgou
Ethiopia
* Ejersa Goro, a town in Misraq Hararghe Zone, Oromia
* Goro, Bale, a town in Bale Zone, Oromia
* Goro, Mirab Shewa, a town in Mir ...
group developed a non-scanning SHG microscope that significantly shortens the time required for observation of large samples, even if the two-photons wide-field microscope was published in 1996 and could have been used to detect SHG. The non-scanning SHG microscope was used for observation of plant
starch
Starch or amylum is a polymeric carbohydrate consisting of numerous glucose units joined by glycosidic bonds. This polysaccharide is produced by most green plants for energy storage. Worldwide, it is the most common carbohydrate in human diets ...
, megamolecule,
spider silk and so on. In 2010 SHG was extended to whole-animal
in vivo imaging. In 2019, SHG applications widened when it was applied to the use of selectively imaging agrochemicals directly on leaf surfaces to provide a way to evaluate the effectiveness of pesticides.
Quantitative measurements
Orientational anisotropy
SHG
polarization
Polarization or polarisation may refer to:
Mathematics
*Polarization of an Abelian variety, in the mathematics of complex manifolds
*Polarization of an algebraic form, a technique for expressing a homogeneous polynomial in a simpler fashion by ...
anisotropy can be used to determine the orientation and degree of organization of proteins in tissues since SHG signals have well-defined polarizations. By using the anisotropy equation:
and acquiring the intensities of the polarizations in the parallel and perpendicular directions. A high
value indicates an anisotropic orientation whereas a low
value indicates an isotropic structure. In work done by Campagnola and Loew,
it was found that collagen fibers formed well-aligned structures with an
value.
Forward over backward SHG
SHG being a
coherent process (
spatially and
temporally), it keeps information on the direction of the excitation and is not emitted isotropically. It is mainly emitted in forward direction (same as excitation), but can also be emitted in backward direction depending on the
phase-matching condition. Indeed, the coherence length beyond which the conversion of the signal decreases is:
with
for forward, but
for backward such that
>>
. Therefore, thicker structures will appear preferentially in forward, and thinner ones in backward: since the SHG conversion depends at first approximation on the square of the number of nonlinear converters, the signal will be higher if emitted by thick structures, thus the signal in forward direction will be higher than in backward. However, the tissue can scatter the generated light, and a part of the SHG in forward can be retro-reflected in the backward direction.
Then, the forward-over-backward ratio F/B can be calculated,
and is a metric of the global size and arrangement of the SHG converters (usually collagen fibrils). It can also be shown that the higher the out-of-plane angle of the scatterer, the higher its F/B ratio (see fig. 2.14 of
).
Polarization-resolved SHG
The advantages of
polarimetry were coupled to SHG in 2002 by Stoller et al. Polarimetry can measure the orientation and order at molecular level, and coupled to SHG it can do so with the specificity to certain structures like collagen: polarization-resolved SHG microscopy (p-SHG) is thus an expansion of SHG microscopy.
p-SHG defines another anisotropy parameter, as:
which is, like ''r'', a measure of the principal orientation and disorder of the structure being imaged. Since it is often performed in long cylindrical filaments (like collagen), this anisotropy is often equal to
,
where
is the
nonlinear susceptibility tensor and X the direction of the filament (or main direction of the structure), Y orthogonal to X and Z the propagation of the excitation light.
The orientation ''ϕ'' of the filaments in the plane XY of the image can also be extracted from p-SHG by
FFT analysis, and put in a map.
Fibrosis quantization
Collagen
Collagen () is the main structural protein in the extracellular matrix found in the body's various connective tissues. As the main component of connective tissue, it is the most abundant protein in mammals, making up from 25% to 35% of the whole ...
(particular case, but widely studied in SHG microscopy), can exist in various forms : 28 different types, of which 5 are fibrillar. One of the challenge is to determine and quantify the amount of fibrillar collagen in a tissue, to be able to see its evolution and relationship with other non-collagenous materials.
To that end, a SHG microscopy image has to be corrected to remove the small amount of residual fluorescence or noise that exist at the SHG wavelength. After that, a
mask can be applied to quantify the collagen inside the image.
Among other quantization techniques, it is probably the one with the highest specificity, reproductibility and applicability despite being quite complex.
Others
It has also been used to prove that backpropagating action potentials invade dendritic spines without voltage attenuation, establishing a sound basis for future work on
Long-term potentiation. Its use here was that it provided a way to accurately measure the voltage in the tiny dendritic spines with an accuracy unattainable with standard two-photon microscopy. Meanwhile, SHG can efficiently convert near-infrared light to visible light to enable imaging-guided photodynamic therapy, overcoming the penetration depth limitations.
Materials that can be imaged

SHG microscopy and its expansions can be used to study various tissues: some example images are reported in the figure below: collagen inside the extracellular matrix remains the main application. It can be found in tendon, skin, bone, cornea, aorta, fascia, cartilage, meniscus, intervertebral disks...
Myosin can also be imaged in skeletal muscle or cardiac muscle.
Coupling with THG microscopy
Third-Harmonic Generation
Harmonic generation (HG, also called multiple harmonic generation) is a nonlinear optical process in which n photons with the same frequency interact with a nonlinear material, are "combined", and generate a new photon with n times the energy of t ...
(THG) microscopy can be complementary to SHG microscopy, as it is sensitive to the transverse interfaces, and to the 3rd order nonlinear susceptibility
Applications
Cancer progression, tumor characterization
The
mammographic density is correlated with the
collagen
Collagen () is the main structural protein in the extracellular matrix found in the body's various connective tissues. As the main component of connective tissue, it is the most abundant protein in mammals, making up from 25% to 35% of the whole ...
density, thus SHG can be used for identifying
breast cancer.
SHG is usually coupled to other nonlinear techniques such as
Coherent anti-Stokes Raman Scattering or
Two-photon excitation microscopy, as part of a routine called multiphoton microscopy (or tomography) that provides a non-invasive and rapid in vivo
histology of
biopsies that may be cancerous.
Breast cancer
The comparison of forward and backward SHG images gives insight about the microstructure of collagen, itself related to the grade and stage of a
tumor, and its progression in
breast.
Comparison of SHG and
2PEF can also show the change of
collagen
Collagen () is the main structural protein in the extracellular matrix found in the body's various connective tissues. As the main component of connective tissue, it is the most abundant protein in mammals, making up from 25% to 35% of the whole ...
orientation in
tumors.
Even if SHG microscopy has contributed a lot to breast cancer research, it is not yet established as a reliable technique in
hospitals, or for diagnostic of this
pathology in general.
Ovarian cancer
Healthy ovaries present in SHG a uniform
epithelial layer and well-organized collagen in their
stroma, whereas abnormal ones show an epithelium with large cells and a changed collagen structure.
The r ratio is also used
to show that the alignment of fibrils is slightly higher for cancerous than for normal tissues.
Skin cancer
SHG is, again, combined to
2PEF is used to calculate the ratio:
where shg (resp. tpef) is the number of thresholded pixels in the SHG (resp. 2PEF) image,
a high MFSI meaning a pure SHG image (with no fluorescence). The highest MFSI is found in cancerous tissues,
which provides a contrast mode to differentiate from normal tissues.
SHG was also combined to
Third-Harmonic Generation
Harmonic generation (HG, also called multiple harmonic generation) is a nonlinear optical process in which n photons with the same frequency interact with a nonlinear material, are "combined", and generate a new photon with n times the energy of t ...
(THG) to show that backward THG is higher in tumors.
Pancreatic cancer
Changes in collagen ultrastructure in
pancreatic
The pancreas is an Organ (anatomy), organ of the digestive system and endocrine system of vertebrates. In humans, it is located in the abdominal cavity, abdomen behind the stomach and functions as a gland. The pancreas is a mixed or heterocrine ...
cancer can be investigated by multiphoton fluorescence and polarization-resolved SHIM.
Other cancers
SHG microscopy was reported for the study of
lung
The lungs are the primary organs of the respiratory system in humans and most other animals, including some snails and a small number of fish. In mammals and most other vertebrates, two lungs are located near the backbone on either side of t ...
,
colonic, esophageal
stroma and
cervical cancers.
Pathologies detection
Alterations in the organization or polarity of the
collagen
Collagen () is the main structural protein in the extracellular matrix found in the body's various connective tissues. As the main component of connective tissue, it is the most abundant protein in mammals, making up from 25% to 35% of the whole ...
fibrils can be signs of pathology,.
In particular, the anisotropy of alignment of
collagen
Collagen () is the main structural protein in the extracellular matrix found in the body's various connective tissues. As the main component of connective tissue, it is the most abundant protein in mammals, making up from 25% to 35% of the whole ...
fibers allowed to discriminate healthy
dermis
The dermis or corium is a layer of skin between the epidermis (with which it makes up the cutis) and subcutaneous tissues, that primarily consists of dense irregular connective tissue and cushions the body from stress and strain. It is divided i ...
against pathological scars in
skin.
Also, pathologies in
cartilage
Cartilage is a resilient and smooth type of connective tissue. In tetrapods, it covers and protects the ends of long bones at the joints as articular cartilage, and is a structural component of many body parts including the rib cage, the neck an ...
such as
osteoarthritis can be probed by polarization-resolved SHG microscopy,.
SHIM was later extended to fibro-cartilage (
meniscus).
Tissue engineering
The ability of
SHG to image specific molecules can reveal the structure of a certain tissue one material at a time, and at various scales (from macro to micro) using microscopy. For instance, the
collagen
Collagen () is the main structural protein in the extracellular matrix found in the body's various connective tissues. As the main component of connective tissue, it is the most abundant protein in mammals, making up from 25% to 35% of the whole ...
(type I) is specifically imaged from the
extracellular matrix (ECM) of cells, or when it serves as a scaffold or conjonctive material in tissues.
SHG also reveals fibroin in
silk,
myosin
Myosins () are a superfamily of motor proteins best known for their roles in muscle contraction and in a wide range of other motility processes in eukaryotes. They are ATP-dependent and responsible for actin-based motility.
The first myosin ...
in
muscles and biosynthetized
cellulose.
All of this imaging capability can be used to design artificials tissues, by targeting specific points of the tissue : SHG can indeed quantitatively measure some orientations, and material quantity and arrangement.
Also, SHG coupled to other multiphoton techniques can serve to monitor the development of engineered tissues, when the sample is relatively thin however.
Of course, they can finally be used as a quality control of the fabricated tissues.
Structure of the eye
Cornea, at the surface of the
eye
Eyes are organs of the visual system. They provide living organisms with vision, the ability to receive and process visual detail, as well as enabling several photo response functions that are independent of vision. Eyes detect light and conv ...
, is considered to be made of plywood-like structure of
collagen
Collagen () is the main structural protein in the extracellular matrix found in the body's various connective tissues. As the main component of connective tissue, it is the most abundant protein in mammals, making up from 25% to 35% of the whole ...
, due to the self-organization properties of sufficiently dense
collagen
Collagen () is the main structural protein in the extracellular matrix found in the body's various connective tissues. As the main component of connective tissue, it is the most abundant protein in mammals, making up from 25% to 35% of the whole ...
.
Yet, the collagenous orientation in lamellae is still under debate in this
tissue.
Keratoconus
Keratoconus (KC) is a disorder of the eye that results in progressive thinning of the cornea. This may result in blurry vision, double vision, nearsightedness, irregular astigmatism, and light sensitivity leading to poor quality-of-life. Usu ...
cornea can also be imaged by SHG to reveal morphological alterations of the
collagen
Collagen () is the main structural protein in the extracellular matrix found in the body's various connective tissues. As the main component of connective tissue, it is the most abundant protein in mammals, making up from 25% to 35% of the whole ...
.
Third-Harmonic Generation
Harmonic generation (HG, also called multiple harmonic generation) is a nonlinear optical process in which n photons with the same frequency interact with a nonlinear material, are "combined", and generate a new photon with n times the energy of t ...
(THG) microscopy is moreover used to image the
cornea, which is complementary to SHG signal as THG and SHG maxima in this tissue are often at different places.
See also
*
Second-harmonic generation
*
Nonlinear optics
*
Two-photon excitation microscopy
Sources
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References
{{Lasers
Microscopy
Cell imaging
Laboratory equipment
Optical microscopy