Transcription factor SOX-9 is a
protein
Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residue (biochemistry), residues. Proteins perform a vast array of functions within organisms, including Enzyme catalysis, catalysing metab ...
that in humans is encoded by the ''SOX9''
gene
In biology, the word gene has two meanings. The Mendelian gene is a basic unit of heredity. The molecular gene is a sequence of nucleotides in DNA that is transcribed to produce a functional RNA. There are two types of molecular genes: protei ...
.
Function
SOX-9 recognizes the sequence CCTTGAG along with other members of the
HMG-box class
DNA-binding proteins. It is expressed by proliferating but not hypertrophic chondrocytes that is essential for differentiation of precursor cells into
chondrocytes
Chondrocytes (, ) are the only cells found in healthy cartilage. They produce and maintain the cartilaginous matrix, which consists mainly of collagen and proteoglycans. Although the word '' chondroblast'' is commonly used to describe an immatu ...
and, with
steroidogenic factor 1, regulates transcription of the anti-Müllerian hormone (
AMH) gene.
SOX-9 also plays a pivotal role in male sexual development; by working with Sf1, SOX-9 can produce AMH in
Sertoli cell
Sertoli cells are a type of sustentacular "nurse" cell found in human testes which contribute to the process of spermatogenesis (the production of sperm) as a structural component of the seminiferous tubules. They are activated by follicle-sti ...
s to inhibit the creation of a female reproductive system.
It also interacts with a few other genes to promote the development of male sexual organs. The process starts when the transcription factor
testis determining factor
Sex-determining region Y protein (SRY), or testis-determining factor (TDF), is a DNA-binding protein (also known as gene-regulatory protein/transcription factor) encoded by the ''SRY'' gene that is responsible for the initiation of male sex ...
(encoded by the sex-determining region
SRY of the
Y chromosome
The Y chromosome is one of two sex chromosomes in therian mammals and other organisms. Along with the X chromosome, it is part of the XY sex-determination system, in which the Y is the sex-determining chromosome because the presence of the ...
) activates SOX-9 activity by binding to an
enhancer sequence
upstream of the gene.
Next, SOX9 activates
FGF9 and forms feedforward loops with FGF9
and
PGD2.
These loops are important for producing SOX-9; without these loops, SOX-9 would run out and the development of a female would almost certainly ensue. Activation of FGF9 by SOX-9 starts vital processes in male development, such as the creation of
testis cords and the multiplication of
Sertoli cell
Sertoli cells are a type of sustentacular "nurse" cell found in human testes which contribute to the process of spermatogenesis (the production of sperm) as a structural component of the seminiferous tubules. They are activated by follicle-sti ...
s.
The association of SOX-9 and
Dax1 actually creates Sertoli cells, another vital process in male development.
In the brain development, its murine ortholog Sox-9 induces the expression of
Wwp1
NEDD4-like E3 ubiquitin-protein ligase WWP1 is an enzyme that in humans is encoded by the ''WWP1'' gene
In biology, the word gene has two meanings. The Mendelian gene is a basic unit of heredity. The molecular gene is a sequence of nucleoti ...
,
Wwp2
NEDD4-like E3 ubiquitin-protein ligase WWP2 also known as atrophin-1-interacting protein 2 (AIP2) or WW domain-containing protein 2 (WWP2) is an enzyme that in humans is encoded by the ''WWP2'' gene.
Function
This gene encodes a member of the ...
, and miR-140 to regulate cortical plate entry of newly born nerve cells, and regulate axon branching and axon formation in cortical neurons.
Sox9, also known as SRY-Box Transcription Factor 9, is an important gene is sex determination. The SOX family of genes are all transcription factors for the Y chromosomal sex-determining factor SRY. The SRY gene encodes the SOX transcription factor while it upregulates Sox9. Sox9 then activates Fgf9, Fibroblast growth factor 9, which is another integral transcription factor in the formation of the male gonads. Fgf9 up-regulates Sox9 in a positive feedforward cascade, this causes the differentiation of sertoli cells leading to the formation of the testis.
SOX-9 is a target of the
Notch signaling pathway
The Notch signaling pathway is a highly Conserved sequence, conserved cell signaling system present in most animal, animals. Mammals possess four different Notch proteins, notch receptors, referred to as NOTCH1, NOTCH2, Notch 3, NOTCH3, and NOTC ...
, as well as the
Hedgehog pathway, and plays a role in the regulation of
neural stem cell fate
Destiny, sometimes also called fate (), is a predetermined course of events. It may be conceived as a predeterminism, predetermined future, whether in general or of an individual.
Fate
Although often used interchangeably, the words wiktionary ...
. In vivo and in vitro studies show that SOX-9 negatively regulates
neurogenesis
Neurogenesis is the process by which nervous system cells, the neurons, are produced by neural stem cells (NSCs). This occurs in all species of animals except the porifera (sponges) and placozoans. Types of NSCs include neuroepithelial cells ( ...
and positively regulates
gliogenesis and stem cell survival.
In adult articular chondrocytes,
siRNA-mediated knockdown of SOX-9 or
RTL3 results in the downregulation of the other and reduced
type II collagen
Type II collagen is the basis for hyaline cartilage, including the articular cartilages at joint surfaces. It is formed by homotrimers of collagen, type II, alpha 1 chains.
It makes up 50% of all protein in cartilage and 85–90% of collagen o ...
(
COL2A1) mRNA and protein expression.
Overexpression of SOX9 in the XY gonads can be used in the absence of SRY to further male sex determination and testis development. It can also be found that the expression of SOX9 ectopically in the XX gonads results in the development of testis, even in the absence of SRY. Both demonstrate that SOX9, in the absence of SRY for the XX and XY gonads, will continue to play a crucial role in testis development, testis differentiation, and sex determination. It is also elaborated that SOX9 can be substituted for SRY.
Clinical significance
Mutations lead to the skeletal malformation syndrome
campomelic dysplasia, frequently with autosomal sex-reversal
and
cleft palate
A cleft lip contains an opening in the upper lip that may extend into the nose. The opening may be on one side, both sides, or in the middle. A cleft palate occurs when the palate (the roof of the mouth) contains an opening into the nose. The ...
.
SOX9 sits in a
gene desert on 17q24 in humans. Deletions, disruptions by
translocation breakpoints and a single point mutation of highly conserved non-coding elements located > 1
Mb from the transcription unit on either side of SOX9 have been associated with
Pierre Robin Sequence, often with a
cleft palate
A cleft lip contains an opening in the upper lip that may extend into the nose. The opening may be on one side, both sides, or in the middle. A cleft palate occurs when the palate (the roof of the mouth) contains an opening into the nose. The ...
.
The SOX9 protein has been implicated in both initiation and progression of multiple solid tumors.
Its role as a master regulator of
morphogenesis
Morphogenesis (from the Greek ''morphê'' shape and ''genesis'' creation, literally "the generation of form") is the biological process that causes a cell, tissue or organism to develop its shape. It is one of three fundamental aspects of deve ...
during
human development Human development may refer to:
* Development of the human body
** This includes physical developments such as growth, and also development of the brain
* Developmental psychology
* Development theory
* Human development (economics)
* Human Develo ...
makes it an ideal candidate for perturbation in malignant tissues. Specifically, SOX9 appears to induce invasiveness and therapy-resistance in prostate,
colorectal, breast and other cancers, and therefore promotes lethal metastasis. Many of these oncogenic effects of SOX9 appear dose-dependent.
SOX9 localization and dynamics
SOX9 is mostly localized in the nucleus and it is highly mobile. Studies in chondrocyte cell line has revealed nearly 50% of SOX9 is bound to DNA and it is directly regulated by external factors. Its half-time of residence on DNA is ~14 seconds.
Role in Sexual Differentiation
SOX9 helps channel SRY activation in sexual differentiation.
Mutation
In biology, a mutation is an alteration in the nucleic acid sequence of the genome of an organism, virus, or extrachromosomal DNA. Viral genomes contain either DNA or RNA. Mutations result from errors during DNA or viral replication, ...
s in SOX9 or any associated genes can cause a reversal of sex. If FGF9, which is activated by SOX9, is not present, a
fetus
A fetus or foetus (; : fetuses, foetuses, rarely feti or foeti) is the unborn offspring of a viviparous animal that develops from an embryo. Following the embryonic development, embryonic stage, the fetal stage of development takes place. Pren ...
with both X and Y
chromosome
A chromosome is a package of DNA containing part or all of the genetic material of an organism. In most chromosomes, the very long thin DNA fibers are coated with nucleosome-forming packaging proteins; in eukaryotic cells, the most import ...
s will become female.
the same is true if
DAX1 is not present.
The related phenomena can be caused by unusual activity of the SRY in
XX male syndrome, usually when it's translocated onto the X-chromosome and its activity is only activated in some cells.
Mutation or deletion of SOX9 could cause an XY fetus to be female because SOX9 is a critical effector gene that works because of the SRY gene to differentiate Sertoli cells and drive testis formation in males.
Interactions
SOX9 has been shown to
interact with
steroidogenic factor 1,
MED12
Mediator of RNA polymerase II transcription, subunit 12 homolog (S. cerevisiae), also known as MED12, is a human gene found on the X chromosome.
Clinical significance
Mutations in ''MED12'' are responsible for at least two different forms of X ...
,
MAF,
SWI/SNF
In molecular biology, SWI/SNF (SWItch/Sucrose Non-Fermentable), is a subfamily of ATP-dependent chromatin remodeling complexes, which is found in eukaryotes. In other words, it is a group of proteins that associate to remodel the way DNA is packa ...
,
MLL3 and
MLL4.
Knock out models
Loss of function mutations with Sox9 can lead to campomelic dysplasia(CD), due to mutations affecting protein functions and translocations that disrupt gene expression. There have been Sox9 knockout mice that have shown improved stroke recovery, especially when inhibiting inhibitors of axonal sprouting such as NOGO and chondroitin sulfate proteoglycans (CSPGs). Sox9 ablation leads to decreased levels of CSPG, which increases tissue sparing and improved post-stroke neurological recovery. These Sox9 knockout mice promote reparative axonal sprouting, neuroprotection and recovery after stroke.
See also
*
SOX genes
''SOX'' genes (''SRY''-related HMG-box genes) encode a family of transcription factors that bind to the minor groove in DNA, and belong to a super-family of genes characterized by a homology (biology), homologous sequence called the HMG-box (fo ...
Further reading
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References
External links
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{{NLM content
Transcription factors