Phytophthora Ramorum
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''Phytophthora ramorum'' is the
oomycete The Oomycetes (), or Oomycota, form a distinct phylogenetic lineage of fungus-like eukaryotic microorganisms within the Stramenopiles. They are filamentous and heterotrophic, and can reproduce both sexually and asexually. Sexual reproduction o ...
known to cause the disease sudden oak death (SOD). The disease kills
oak An oak is a hardwood tree or shrub in the genus ''Quercus'' of the beech family. They have spirally arranged leaves, often with lobed edges, and a nut called an acorn, borne within a cup. The genus is widely distributed in the Northern Hemisp ...
and other species of trees and has had devastating effects on the oak populations in
California California () is a U.S. state, state in the Western United States that lies on the West Coast of the United States, Pacific Coast. It borders Oregon to the north, Nevada and Arizona to the east, and shares Mexico–United States border, an ...
and
Oregon Oregon ( , ) is a U.S. state, state in the Pacific Northwest region of the United States. It is a part of the Western U.S., with the Columbia River delineating much of Oregon's northern boundary with Washington (state), Washington, while t ...
, as well as being present in
Europe Europe is a continent located entirely in the Northern Hemisphere and mostly in the Eastern Hemisphere. It is bordered by the Arctic Ocean to the north, the Atlantic Ocean to the west, the Mediterranean Sea to the south, and Asia to the east ...
. Symptoms include bleeding
canker A plant canker is a small area of dead tissue, which grows slowly, often over years. Some cankers are of only minor consequence, but others are ultimately lethal and therefore can have major economic implications for agriculture and horticultur ...
s on the tree's trunk and dieback of the
foliage A leaf (: leaves) is a principal appendage of the stem of a vascular plant, usually borne laterally above ground and specialized for photosynthesis. Leaves are collectively called foliage, as in "autumn foliage", while the leaves, stem, f ...
, in many cases leading to the death of the tree. ''P. ramorum'' also infects a great number of other plant species, significantly woody ornamentals such as ''
Rhododendron ''Rhododendron'' (; : ''rhododendra'') is a very large genus of about 1,024 species of woody plants in the Ericaceae, heath family (Ericaceae). They can be either evergreen or deciduous. Most species are native to eastern Asia and the Himalayan ...
'', ''
Viburnum ''Viburnum'' is a genus of about 150–175 species of flowering plants in the moschatel family, Adoxaceae. Its current classification is based on molecular phylogeny. It was previously included in the honeysuckle family Caprifoliaceae. The memb ...
'', and '' Pieris'', causing foliar symptoms known as ramorum dieback or ramorum blight. Such plants can act as a source of inoculum for new infections, with the
pathogen In biology, a pathogen (, "suffering", "passion" and , "producer of"), in the oldest and broadest sense, is any organism or agent that can produce disease. A pathogen may also be referred to as an infectious agent, or simply a Germ theory of d ...
producing
spore In biology, a spore is a unit of sexual reproduction, sexual (in fungi) or asexual reproduction that may be adapted for biological dispersal, dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores fo ...
s that can be transmitted by rainsplash and
rain Rain is a form of precipitation where water drop (liquid), droplets that have condensation, condensed from Water vapor#In Earth's atmosphere, atmospheric water vapor fall under gravity. Rain is a major component of the water cycle and is res ...
water. ''P. ramorum'' was first reported in 1995, and the origins of the pathogen are still unclear, but most evidence suggests it was introduced as an exotic species to Europe and North America in separate events. Very few control mechanisms exist for the disease, and they rely upon early detection and proper disposal of infected plant material.


Presence

The disease is known to exist in California's coastal region between
Big Sur Big Sur () is a rugged and mountainous section of the Central Coast (California), Central Coast of the U.S. state of California, between Carmel Highlands and San Simeon, where the Santa Lucia Range, Santa Lucia Mountains rise abruptly from th ...
(in Monterey County) and southern Humboldt County. It is confirmed to exist in all coastal counties in this range, as well as in all immediately inland counties from
Santa Clara County Santa Clara County, officially the County of Santa Clara, is the sixth-most populous county in the U.S. state of California, with a population of 1,936,259 as of the 2020 census. Santa Clara County and neighboring San Benito County form the ...
north to Lake County. It has not been found east of the
California Coast Ranges The Coast Ranges of California span from Del Norte County, California, Del Norte or Humboldt County, California, south to Santa Barbara County, California, Santa Barbara County. The other three coastal California mountain ranges are the Trans ...
, however. It was reported in Curry County, Oregon, just north of the California stateline, in 2001.
Sonoma County Sonoma County ( ) is a county located in the U.S. state of California. As of the 2020 United States census, its population was 488,863. Its seat of government and largest city is Santa Rosa. Sonoma County comprises the Santa Rosa-Petaluma ...
has been hit hardest, having more than twice the area of new mortality of any other county in California. About the same time, a similar disease in continental
Europe Europe is a continent located entirely in the Northern Hemisphere and mostly in the Eastern Hemisphere. It is bordered by the Arctic Ocean to the north, the Atlantic Ocean to the west, the Mediterranean Sea to the south, and Asia to the east ...
and the UK was also identified as ''Phytophthora ramorum''.


Hosts and symptoms


In North America

It was first discovered in California in 1995 when large numbers of
tanoak ''Notholithocarpus densiflorus'', commonly known as the tanoak or tanbark-oak, is a broadleaf tree in the family Fagaceae, and the type species of the genus ''Notholithocarpus''. It is a hardwood tree that is native to the far western United Sta ...
s ('' Notholithocarpus densiflorus'') died mysteriously, and was described as a new species of ''
Phytophthora ''Phytophthora'' (from Greek (''phytón''), "plant" and (), "destruction"; "the plant-destroyer") is a genus of plant-damaging oomycetes (water molds), whose member species cause economic losses on crops worldwide, as well as environmental dam ...
'' in 2000. It has subsequently been found in many other areas, including some other
U.S. The United States of America (USA), also known as the United States (U.S.) or America, is a country primarily located in North America. It is a federal republic of 50 states and a federal capital district, Washington, D.C. The 48 contiguous ...
states,
Britain Britain most often refers to: * Great Britain, a large island comprising the countries of England, Scotland and Wales * The United Kingdom of Great Britain and Northern Ireland, a sovereign state in Europe comprising Great Britain and the north-eas ...
, and
Germany Germany, officially the Federal Republic of Germany, is a country in Central Europe. It lies between the Baltic Sea and the North Sea to the north and the Alps to the south. Its sixteen States of Germany, constituent states have a total popu ...
, either accidentally introduced in nursery stock, or already present undetected. In tanoaks, the disease is recognized by
wilting Wilting is the loss of rigidity of non-woody parts of plants. This occurs when the turgor pressure in non- lignified plant cells falls towards zero, as a result of diminished water in the cells. Wilting also serves to reduce water loss, as it ...
new shoots, older leaves becoming pale green, and after a period of two to three weeks, foliage turning brown while clinging to the branches. Dark brown sap stains the lower trunk's bark. Bark often splits and exudes gum, with visible discoloration. After the tree dies back, suckers try to sprout the next year, but their tips soon bend and die.
Ambrosia beetle Ambrosia beetles are beetles of the weevil subfamilies Scolytinae and Platypodinae (Coleoptera, Curculionidae), which live in nutritional symbiosis with ambrosia fungi. The beetles excavate tunnels in dead or stressed trees into which they introduc ...
s ('' Monarthrum scutellare'') will most likely infest a dying tree during midsummer, producing piles of fine white dust near tiny holes. Later,
bark beetle A bark beetle is the common name for the subfamily of beetles Scolytinae. Previously, this was considered a distinct family (Scolytidae), but is now understood to be a specialized clade of the "true weevil" family (Curculionidae). Although th ...
s ('' Pseudopityophthorus pubipennis'') produce fine, red boring dust. Small black domes, the fruiting bodies of the '' Hypoxylon'' fungus, often are present on the
bark Bark may refer to: Common meanings * Bark (botany), an outer layer of a woody plant such as a tree or stick * Bark (sound), a vocalization of some animals (which is commonly the dog) Arts and entertainment * ''Bark'' (Jefferson Airplane album), ...
. Leaf death occurs more than a year after the initial infection and months after the tree has been girdled by beetles. In coast live oaks and Californian black oaks, the first symptom is a burgundy-red to tar-black thick sap bleeding from the bark surface. These are often referred to as bleeding
canker A plant canker is a small area of dead tissue, which grows slowly, often over years. Some cankers are of only minor consequence, but others are ultimately lethal and therefore can have major economic implications for agriculture and horticultur ...
s. In addition to oaks, many other forest species may be hosts for the disease; in fact, it was observed in the United States that nearly all woody plants in some Californian
forest A forest is an ecosystem characterized by a dense ecological community, community of trees. Hundreds of definitions of forest are used throughout the world, incorporating factors such as tree density, tree height, land use, legal standing, ...
s were susceptible to ''P. ramorum''. including
rhododendron ''Rhododendron'' (; : ''rhododendra'') is a very large genus of about 1,024 species of woody plants in the Ericaceae, heath family (Ericaceae). They can be either evergreen or deciduous. Most species are native to eastern Asia and the Himalayan ...
, madrone (''Arbutus menziesii''), evergreen
huckleberry Huckleberry is a name used in North America for several plants in the family Ericaceae, in two closely related genera: ''Vaccinium'' and ''Gaylussacia''. Nomenclature The name 'huckleberry' is a North American variation of the English dialectal ...
(''Vaccinium ovatum''), California bay laurel (''Umbellularia californica''), buckeye (''
Aesculus californica ''Aesculus californica'', commonly known as the California buckeye or California horse-chestnut, is a species of buckeye native to California and southwestern Oregon. Description Aesculus californica is a large deciduous shrub or small tree, u ...
''), bigleaf maple (''Acer macrophyllum''),
toyon ''Heteromeles arbutifolia'' (, more commonly by Californian botanists), commonly known as toyon, is a perennial shrub native to Coastal California. It is the sole species in the genus ''Heteromeles''. Description Toyon typically grows from , r ...
(''Heteromeles arbutifolia''), manzanita (''Arctostaphylos spp.''), coast redwood (''Sequoia sempervirens''),
Douglas fir The Douglas fir (''Pseudotsuga menziesii'') is an evergreen conifer species in the pine family, Pinaceae. It is the tallest tree in the Pinaceae family. It is native to western North America and is also known as Douglas-fir, Douglas spruce, Or ...
(''Pseudotsuga menziesii''), coffeeberry ('' Rhamnus californica''),
honeysuckle Honeysuckles are arching shrubs or Vine#Twining vines, twining vines in the genus ''Lonicera'' () of the family Caprifoliaceae. The genus includes 158 species native to northern latitudes in North America, Eurasia, and North Africa. Widely kno ...
(''Lonicera hispidula''), and Shreve oak ('' Quercus parvula''). ''P. ramorum'' more commonly causes a less severe disease known as ramorum dieback/leaf blight on these
host A host is a person responsible for guests at an event or for providing hospitality during it. Host may also refer to: Places * Host, Pennsylvania, a village in Berks County * Host Island, in the Wilhelm Archipelago, Antarctica People * ...
s. Characteristic symptoms are dark spots on
foliage A leaf (: leaves) is a principal appendage of the stem of a vascular plant, usually borne laterally above ground and specialized for photosynthesis. Leaves are collectively called foliage, as in "autumn foliage", while the leaves, stem, f ...
and in some hosts the dieback of the stems and twigs. The disease is capable of killing some hosts, such as rhododendron, but most survive. Disease progression on these species is not well documented. Redwoods symptoms show purple lesions on sprouts and needle discoloration and cankers on small branches, which can lead to sprout mortality. The primary symptom of ''P. ramorum'' on ''Rhododendron'' are leaf spots that expand into lesions. The lesions pierce through the plant tissue so that the spots are the same on both the top and bottom of the leaf. The lesions are usually triangular in shape and extend along the midvein. They can appear anywhere water collects on the surface of the leaf. Leaf spots have diffused margins and can appear water soaked. In severe cases, the entire host plant can die.


In Europe

In Europe, ramorum blight was first observed on ''Rhododendron'' and ''Viburnum'' in the early 1990s, where it was initially found mainly on container-grown plants in nurseries. The principal symptoms were leaf and twig blight. By 2007, it had spread throughout nurseries and retail centers in 16 European countries, and had been detected in gardens, parks, and woodlands in at least eight countries. It has not caused significant harm to European oak species. In 2009, the pathogen was found to be infecting and killing large numbers of Japanese larch trees ('' Larix kaempferi'') in the United Kingdom at sites in the English counties of
Somerset Somerset ( , ), Archaism, archaically Somersetshire ( , , ) is a Ceremonial counties of England, ceremonial county in South West England. It is bordered by the Bristol Channel, Gloucestershire, and Bristol to the north, Wiltshire to the east ...
,
Devon Devon ( ; historically also known as Devonshire , ) is a ceremonial county in South West England. It is bordered by the Bristol Channel to the north, Somerset and Dorset to the east, the English Channel to the south, and Cornwall to the west ...
, and
Cornwall Cornwall (; or ) is a Ceremonial counties of England, ceremonial county in South West England. It is also one of the Celtic nations and the homeland of the Cornish people. The county is bordered by the Atlantic Ocean to the north and west, ...
. It was the first time in the world that ''Phytophthora ramorum'' had been found infecting this species. Since then, it has also been found extensively in larch plantations in Wales and in southwest Scotland, which led to harvesting of larch on hundreds of acres/hectares. The UK
Forestry Commission The Forestry Commission is a non-ministerial government department responsible for the management of publicly owned forests and the regulation of both public and private forestry in England. The Forestry Commission was previously also respons ...
noted that eradication of the disease would not be possible, and instead adopted a strategy of containing the disease to reduce its spread. Symptoms of the disease on larch trees include dieback of the tree's crown and branches, and a distinctive yellowing or ginger colour beneath the bark. In August 2010, the disease was found in Japanese larch trees in counties
Waterford Waterford ( ) is a City status in Ireland, city in County Waterford in the South-East Region, Ireland, south-east of Ireland. It is located within the Provinces of Ireland, province of Munster. The city is situated at the head of Waterford H ...
and Tipperary in Ireland. It had spread to Japanese larch plantations across the south of the country by February 2014.
Coillte Coillte (; ; meaning /) is a state-owned commercial forestry business in Ireland based in Newtownmountkennedy. Coillte manage approximately 7% of the country’s land, and operates three businesses - their core forestry business, a 'land solut ...
, who owned twenty forests where the disease was present, felled 16,000 trees in one of its forests, having already felled 150 hectares to contain the disease. In 2023 the disease was found to be infecting larch trees at Wyming Brook, Sheffield, with plans to fell over 1,000 trees to contain the spread of the infection. The closely related '' Phytophthora kernoviae'' causes similar symptoms to ''P. ramorum'', but infects the European beech (''
Fagus sylvatica ''Fagus sylvatica'', the European beech or common beech, is a large, graceful deciduous tree in the Fagaceae, beech family with smooth silvery-gray bark, large leaf area, and a short trunk with low branches. Description ''Fagus sylvatica'' i ...
'').


Disease cycle

The primary inoculum (sporangia) of ''P. ramorum''. develop on the leaves of the primary host, which include tree species like the California bay laurel, a large hardwood tree that grows on the pacific west coast. These spores are then carried by rain and air currents to the leaves of the new bole canker host, which include broadleaf trees like tanoaks, where they begin to develop. The secondary inoculum infects the inner bark and sapwood, resulting in bleeding cankers on the bark of the new host, which are exacerbated by infected fallen leaves and rain splashing the understory of the canker host which can both serve as sources of inoculum. After the plant matter it infects dies and decomposes, ''P. ramorum'' is transferred to the soil by rainwater, where the final part of its cycle (soil phase) is poorly understood by scientists. However, it is suspected that chlamydospores play a role in the long-term survival of the pathogen, yet the triggers for germination are not known. Additionally, the spores of ''P. ramorum'' only seem to propagate successfully in a temperature range between , which is useful to know for protecting nurseries and identifying potential transfer windows for the disease.


Transmission

''P. ramorum'' produces both resting
spore In biology, a spore is a unit of sexual reproduction, sexual (in fungi) or asexual reproduction that may be adapted for biological dispersal, dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores fo ...
s (chlamydospores) and
zoospore A zoospore is a motile asexual spore that uses a flagellum for locomotion in aqueous or moist environments. Also called a swarm spore, these spores are created by some protists, bacteria, and fungi to propagate themselves. Certain zoospores are ...
s, which have
flagella A flagellum (; : flagella) (Latin for 'whip' or 'scourge') is a hair-like appendage that protrudes from certain plant and animal sperm cells, from fungal spores ( zoospores), and from a wide range of microorganisms to provide motility. Many pr ...
enabling
swimming Swimming is the self-propulsion of a person through water, such as saltwater or freshwater environments, usually for recreation, sport, exercise, or survival. Swimmers achieve locomotion by coordinating limb and body movements to achieve hydrody ...
. ''P. ramorum'' is spread by air; one of the major mechanisms of dispersal is rainwater splashing spores onto other susceptible plants, and into
watercourse A stream is a continuous body of water, body of surface water Current (stream), flowing within the stream bed, bed and bank (geography), banks of a channel (geography), channel. Depending on its location or certain characteristics, a strea ...
s to be carried for greater distances. Chlamydospores can withstand harsh conditions and are able to overwinter. The pathogen will take advantage of wounding, but it is not necessary for
infection An infection is the invasion of tissue (biology), tissues by pathogens, their multiplication, and the reaction of host (biology), host tissues to the infectious agent and the toxins they produce. An infectious disease, also known as a transmis ...
to occur. As mentioned above, ''P. ramorum'' does not kill every plant that can be used as a
host A host is a person responsible for guests at an event or for providing hospitality during it. Host may also refer to: Places * Host, Pennsylvania, a village in Berks County * Host Island, in the Wilhelm Archipelago, Antarctica People * ...
, and these plants are most important in the
epidemiology Epidemiology is the study and analysis of the distribution (who, when, and where), patterns and Risk factor (epidemiology), determinants of health and disease conditions in a defined population, and application of this knowledge to prevent dise ...
of the disease as they act as sources of inoculum. In California, California bay laurel (''Umbellularia californica'') seems to be the main source of inoculum. Green waste, such as leaf litter and tree stumps, are also capable of supporting ''P. ramorum'' as a
saprotroph Saprotrophic nutrition or lysotrophic nutrition is a process of chemoheterotrophic extracellular digestion involved in the processing of decayed (dead or waste) organic matter. It occurs in saprotrophs, and is most often associated with fungi ...
and acting as a source of inoculum. Because ''P. ramorum'' is able to infect many
ornamental plant Ornamental plants or ''garden plants'' are plants that are primarily grown for their beauty but also for qualities such as scent or how they shape physical space. Many flowering plants and garden varieties tend to be specially bred cultivars th ...
s, it can be transmitted by ornamental plant movement. In nursery settings, ''P. ramorum'' is dispersed mostly between adjacent, touching plants and exposure to infested surface water.  Long-distance dispersal is enabled by shipments of infected nursery plants, which is likely the cause for introduction into Europe and North America. Hikers,
mountain bike A mountain bike (MTB) or mountain bicycle is a bicycle designed for off-road cycling (''mountain biking''). Mountain bikes share some similarities with other bicycles, but incorporate features designed to enhance durability and performance in r ...
rs, horseback riders, and other
people The term "the people" refers to the public or Common people, common mass of people of a polity. As such it is a concept of human rights law, international law as well as constitutional law, particularly used for claims of popular sovereignty. I ...
engaged in various outdoor activities may also unwittingly move the pathogen into areas where it was not previously present. Those travelling in an area known to be infested with SOD can help prevent the spread of the disease by cleaning their (and their animals') feet, tires, tools, camping equipment, etc. before returning home or entering another uninfected area, especially if they have been in muddy soil. Additionally, the movement of firewood could introduce sudden oak death to otherwise uninfected areas. Both homeowners and travelers are advised to buy and burn local firewood. Transmission of ''P. ramorum'' may also occur through movement of propagules on the exterior of some animals, such as migratory birds, snails, and slugs.


The two mating types

''P. ramorum'' is heterothallic and has two mating types, A1 and A2, required for sexual reproduction. The European population is predominantly A1 while both mating types A1 and A2 are found in
North America North America is a continent in the Northern Hemisphere, Northern and Western Hemisphere, Western hemispheres. North America is bordered to the north by the Arctic Ocean, to the east by the Atlantic Ocean, to the southeast by South Ameri ...
. Genetics of the two isolates indicate that they are reproductively isolated. On average, the A1 mating type is more virulent than the A2 mating type, but more variation occurs in the pathogenicity of A2 isolates. It is currently not clear whether this pathogen can reproduce sexually in nature and genetic work has suggested that the lineages of the two mating types might be isolated reproductively or geographically given the evolutionary divergence observed. One study conducted in 2010 investigated the sexual reproduction capacity of this pathogen by pairing between the EU1 A1 type and both European and American A2 types. Plugs of tomato juice agarose containing actively growing ''P. ramorum'' cultures of different types on carrot agar and incubated in the dark at 20 Celsius. Resultant oospores were isolated, cleaned, and stained with tetrazolium dye in the
MTT assay The MTT assay is a colorimetric assay for assessing cell metabolic activity. NAD(P)H-dependent cellular oxidoreductase enzymes may, under defined conditions, reflect the number of viable cells present. These enzymes are capable of reducing the t ...
. Purple oospores were counted as dormant whereas clear, blue, or black were considered non-viable. Some of the purple spores had abnormal morphologies, however. Normal morphology includes a nucleus, a double wall, and an ooplast. After a 60-day maturation period, no germination of the dormant oospores was observed. After a 110-day incubation period, >0.5% of oospores germinated. Longer germination times only marginally increased germination rate. Progeny obtained from the oospores were diverse, with some being homothallic and others being of either A1 or A2 types. Pathogenicity of progeny was likewise variable. Since the discovery of the origin of this pathogen in East Asian laurel forests near Yunnan province and in southwestern Japan, more types of this pathogen have been characterized, such as Indochinese (IC) and Japanese (NP) phenotypes based on colony morphology on agar. However, it appears that there are still only two viable mating types, A1 and A2, with one isolate from the Indochinese group failing to respond to any attempts at inducing mating, leading it to be characterized as "A0", a non-responder. A1 and A2 types were isolated from both Japan and the Yunnan/Vietnam border. Resultant gametangia were sparse. Mean oospore diameter was 26.1 micrometers. Of those oospores that were created, 81.5% of IC1 and IC2 offspring had normal morphology. 18.5% were obviously aborted. For NP1xNP2 gametangia were too sparse to determine abortion rates, but it was very high. Overall, it seems that ''P. ramorum'' is capable of sexual reproduction but it is very inefficient, even among the source population.


Possible origins

''P. ramorum'' is a relatively new disease, and several debates have occurred about where it may have originated or how it evolved. One of the major reasons that identifying the natural range of this organism is difficult is that it typically will not cause symptomatic or infectious disease in hosts that are adapted to live in concert with it naturally. It is only when this organism leaks into vulnerable habitat with less resistant host species that a notable amount of destruction occurs. In 2021, research came out revealing that the origins of this pathogen are subtropical
laurisilva Laurel forest, also called laurisilva or laurissilva, is a type of subtropical forest found in areas with high humidity and relatively stable, mild temperatures. The forest is characterized by broadleaf tree species with evergreen, glossy and el ...
forests in East Asia, specifically the area near the border of Vietnam and Yunnan, China, as well as southwestern Japan. 505 ''Phytophthora'' cultures were obtained from leaves in Fansipan and Sau Chua mountain streams; of these, 64 samples from 7 streams (6 from Fansipan and 1 from Sau Chua) were identified as ''P. ramorum''. On the Japanese islands of Shikoku and Kyushu, 17 stream catchments were sampled, giving 597 ''Phytophthora'' cultures; of these, 3 from Shikoku and 4 from Kyushu were identified as ''P. ramorum.'' In addition to the EU and NA types, researchers identified by colony morphology on carrot agar two new phenotype groups: Indochinese and Japanese. In a high temperature/low water stress test, NA2 and EU2 were highly tolerant, and NA1 and EU1 had no growth. Indochinese (IC) and Japanese (NP) phenotype colonies had highly variable responses, indicating multiple genotypes within each phenotypic grouping. In a mating test, it was discovered that 89% of isolates were of the A1 mating type; only 11% were of type A2. A pairing of two Indochinese types IC1 and IC2 resulted in formation of oospores similar to that observed between known lineages of different type. Lineage IC1 is thought to have given rise to the EU1 group. NP1 is ancestral to NP2 and sister to EU2. NA2 is ancestral to NA1. The level of diversity in the East Asian samples compared to the diversity in the four lineages known previously supports the hypothesis that this is the geographic center of origin of ''Phytophthora ramorum.'' Furthermore, no symptomatic vegetation was observed. The presence of other ''Phytophthora spp.'' including ''P. foliorum'' and ''P. lateralis'' in southwestern Japan suggests that this might be the origin of a clade of related species labelled as clade 8c.


Introduction as an exotic species

''P. ramorum'' is an introduced species, and these introductions occurred separately for the European and North American populations, hence why only one mating type exists on each continent – this is called a
founder effect In population genetics, the founder effect is the loss of genetic variation that occurs when a new population is established by a very small number of individuals from a larger population. It was first fully outlined by Ernst Mayr in 1942, us ...
. The differences between the two populations are thus caused by adaptation to separate climates. Evidence includes little genetic variability, as ''P. ramorum'' has not had time to diversify since being introduced. Existing variability may be explained by multiple introductions with a few individuals adapting best to their respective environments. The behavior of the pathogen in California is also indicative of being introduced; it is assumed that such a high mortality rate of trees would have been noticed sooner if ''P. ramorum'' were
native Native may refer to: People * '' Jus sanguinis'', nationality by blood * '' Jus soli'', nationality by location of birth * Indigenous peoples, peoples with a set of specific rights based on their historical ties to a particular territory ** Nat ...
.


Hybridization events

Species of ''
Phytophthora ''Phytophthora'' (from Greek (''phytón''), "plant" and (), "destruction"; "the plant-destroyer") is a genus of plant-damaging oomycetes (water molds), whose member species cause economic losses on crops worldwide, as well as environmental dam ...
'' have been shown to have evolved by the interspecific hybridization of two different species from the genus. When a species is introduced into a new environment, it causes episodic selection. The invading species is exposed to other resident
taxa In biology, a taxon (back-formation from ''taxonomy''; : taxa) is a group of one or more populations of an organism or organisms seen by taxonomists to form a unit. Although neither is required, a taxon is usually known by a particular name and ...
, and hybridization may occur to produce a new species. If these hybrids are successful, they may outcompete their parent species. Thus, ''P. ramorum'' is possibly a hybrid between two species. Nevertheless, the draft genome of ''P. ramorum'' did not show any evidence of recent hybridization.


Ecological impacts

In relation to human ecology, the loss of tanoak as the pathogen spreads to
culturally sensitive Cultural sensitivity, also referred to as cross-cultural sensitivity or cultural awareness, is the knowledge, awareness, and acceptance of other cultures and others' cultural identities. It is related to cultural competence (the skills needed fo ...
Native American lands represents a loss of tanoak acorns as one of the most important traditional and ceremonial foods still used in Northern California such as among
Yurok people The Yurok people are an Algic-speaking Indigenous people of California that has existed along the or "Health-kick-wer-roy" (now known as the Klamath River) and on the Pacific coast, from Trinidad south of the Klamath’s mouth almost to Cresc ...
, Hupa,
Miwok The Miwok (also spelled Miwuk, Mi-Wuk, or Me-Wuk) are members of four linguistically related Native Americans in the United States, Native American groups indigenous to what is now Northern California, who traditionally spoke one of the Miwok lan ...
, and
Karuk The Karuk people ()Andrew Garrett, Susan Gehr, Erik Hans Maier, Line Mikkelsen, Crystal Richardson, and Clare Sandy. (November 2, 2021) ''Karuk; To appear in The Languages and Linguistics of Indigenous North America: A Comprehensive Guide (De G ...
peoples. Similar impact applies to the decline of other native plant species that are traditional food sources in tanoak and oak regimens infected by the pathogen. In forest ecology, the pathogen contributes to loss of environmental services provided by diversity of plant species and interdependent wildlife. The mortality caused by this emerging disease is expected to cause many indirect effects. Several predictions of long-term impacts have been discussed in the scientific literature. While such predictions are necessarily speculative, indirect impacts occurring on shorter time scales have been documented in a few cases. For instance, one study demonstrated that redwood trees (''
Sequoia sempervirens ''Sequoia sempervirens'' ()''Sunset Western Garden Book,'' 1995: 606–607 is the sole living species of the genus ''Sequoia (genus), Sequoia'' in the cypress family Cupressaceae (formerly treated in Taxodiaceae). Common names include coast ...
'') grew faster after neighboring tanoaks were killed by sudden oak death. Other studies have combined current observations and reconstruction/projection techniques to document short-term impacts while also inferring future conditions. One study used this approach to investigate the effects of SOD on the structural characteristics of redwood forests. Additional long-term impacts of SOD may be inferred from regeneration patterns in areas that have experienced severe mortality. These patterns may indicate which tree species will replace tanoak in diseased areas. Such transitions will be of particular importance in forest types that were relatively poor in tree species diversity before the introduction of SOD, e.g., redwood forest. , the only study to comprehensively examine regeneration in SOD-impacted redwood forests found no evidence that other broadleaf tree species are seeding in. Instead, redwood was colonizing most mortality gaps. However, they also found inadequate regeneration in some areas and concluded that regeneration is continuing. Since this study only considered one site in
Marin County, California Marin County ( ) is a County (United States), county located in the northwestern part of the San Francisco Bay Area of the U.S. state of California. As of the 2020 United States census, 2020 census, the population was 262,231. Its county seat a ...
, these results may not apply to other forests. Other impacts to the local ecology include, among others, the residual effects of spraying heavy pesticides (Agrifos) to treat SOD symptoms, and the heavy mortality of the native pollinator community that occurs as a result. Bee hives situated in areas of heavy Agrifos spraying have incurred significant losses of population in direct correlation to the application of these chemicals. Counties such as Napa and Sonoma may be doing significant damage to their native pollinator populations by virtue of adopting broad-based prophylactic pesticide policies. Such damage to the pollinator populations may have tertiary negative effects on the entire local plant community, compounding the loss of biodiversity, and thus environmental value, attributable to SOD.


Environmental and economic impact

Besides the quick and significant loss of symbiotic host species, since sudden oak death is classified as a stem-girdling disease, which is proven to cause a massive reduction in mycorrhizae soil biomass, the amount of phosphorus and micronutrients that mycorrhizae are able to absorb is greatly reduced in soils occupied by trees with SOD. Another significant environmental impact of ''P. ramorum'' is its tendency to result in large deposits of dry, woody debris in areas prone to forest fires, making them even more difficult to contain. Indeed, hotspots of SOD are "unmanageable" for fire crews, and there is increasing evidence to suggest that SOD plays a large role in a forest's susceptibility to fire. On the other side of the spectrum are the significant economic impacts of ''P. ramorum'', which are difficult to assess, but the most obvious of which is the reduction to property values of real estate containing oak trees, as oaks in particular tend to raise the property value of the plots they inhabit. Additionally, several U.S. industries have suffered due to the spread of SOD, including the ornamental plant, spice, and composting industries, especially in the state of California.


Control


Early detection

Early detection of ''P. ramorum'' is essential for its control. On an individual-tree basis, preventive treatments, which are more effective than therapeutic treatments,Garbelotto, M., D. J. Schmidt, and T. Y. Harnik. 2007. Phosphite Injections and Bark Application of Phosphite + Pentrabark Control Sudden Oak Death in Coast Live Oak. Arboriculture and Urban Forestry 33:8. depend on knowledge of the pathogen's movement through the landscape to know when it is nearing prized trees. On the landscape level, ''P. ramorum's'' fast and often undetectable movement means that any treatment hoping to slow its spread must happen very early in the development of an infestation. Since ''P. ramorum's'' discovery, researchers have been working on the development of early detection methods on scales ranging from diagnosis in individual infected plants to landscape-level detection efforts involving large numbers of people. Detecting the presence of ''Phytophthora'' species requires laboratory confirmation. The traditional method of culturing is on a growth medium selective against fungi (and, in some cases, against other oomycetes such as '' Pythium'' species). Host material is removed from the leading edge of a plant tissue canker caused by the pathogen; resulting growth is examined under a
microscope A microscope () is a laboratory equipment, laboratory instrument used to examine objects that are too small to be seen by the naked eye. Microscopy is the science of investigating small objects and structures using a microscope. Microscopic ...
to confirm the unique
morphology Morphology, from the Greek and meaning "study of shape", may refer to: Disciplines *Morphology (archaeology), study of the shapes or forms of artifacts *Morphology (astronomy), study of the shape of astronomical objects such as nebulae, galaxies, ...
of ''P. ramorum''. Successful isolation of the pathogen often depends on the type of host tissue and the time of year that detection is attempted.Kliejunas, J. T. 2007c. Chapter 2: Identification and Distribution. Sudden Oak Death and Phytophthora ramorum: A Summary of the Literature. California Oak Mortality Task Force. Because of these difficulties, researchers have developed some other approaches for identifying ''P. ramorum''. The
enzyme-linked immunosorbent assay The enzyme-linked immunosorbent assay (ELISA) (, ) is a commonly used analytical biochemistry assay, first described by Eva Engvall and Peter Perlmann in 1971. The assay is a solid-phase type of enzyme immunoassay (EIA) to detect the presence o ...
test can be the first step in nonculture methods of identifying ''P. ramorum'', but it can only be a first step, because it detects the presence of
proteins Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, re ...
that are produced by all ''Phytophthora'' species. In other words, it can identify to the genus level, but not to the species level. ELISA tests can process large numbers of samples at once, so researchers often use it to screen out likely positive samples from those that are not when the total number of samples is very large. Some manufacturers produce small-scale ELISA "field kits" that the homeowner can use to determine if plant tissue is infected by ''Phytophthora''. Researchers have also developed numerous molecular techniques for ''P. ramorum'' identification. These include amplifying
DNA Deoxyribonucleic acid (; DNA) is a polymer composed of two polynucleotide chains that coil around each other to form a double helix. The polymer carries genetic instructions for the development, functioning, growth and reproduction of al ...
sequences in the
internal transcribed spacer Internal transcribed spacer (ITS) is the spacer DNA situated between the small-subunit ribosomal RNA (rRNA) and large-subunit rRNA genes in the chromosome or the corresponding transcribed region in the polycistronic rRNA precursor transcript. ...
region of the ''P. ramorum''
genome A genome is all the genetic information of an organism. It consists of nucleotide sequences of DNA (or RNA in RNA viruses). The nuclear genome includes protein-coding genes and non-coding genes, other functional regions of the genome such as ...
(ITS
polymerase chain reaction The polymerase chain reaction (PCR) is a method widely used to make millions to billions of copies of a specific DNA sample rapidly, allowing scientists to amplify a very small sample of DNA (or a part of it) sufficiently to enable detailed st ...
, or ITS PCR); real-time PCR, in which DNA abundance is measured in real time during the PCR reaction, using dyes or probes such as SBYR-Green or TaqMan; multiplex PCR, which amplifies more than one region of DNA at the same time; and single strand conformation polymorphism (SSCP), which uses the ITS DNA sequence amplified by the PCR reaction to differentiate ''Phytophthora'' species according to their differential movement through a gel. Additionally, researchers have begun using features of the DNA sequence of ''P. ramorum'' to pinpoint the minuscule differences of separate ''P. ramorum'' isolates from each other. Two techniques for doing this are amplified fragment length polymorphism, which through comparing differences between various fragments in the sequence has enabled researchers to differentiate correctly between EU and U.S. isolates, and the examination of microsatellites, which are areas on the sequence featuring repeating base pairs. When ''P. ramorum'' propagules arrive in a new geographic location and establish colonies, these microsatellites begin to display
mutation In biology, a mutation is an alteration in the nucleic acid sequence of the genome of an organism, virus, or extrachromosomal DNA. Viral genomes contain either DNA or RNA. Mutations result from errors during DNA or viral replication, ...
in a relatively short time, and they mutate in a stepwise fashion. Based on this, researchers in California have been able to construct trees, based on microsatellite analyses of isolates collected from around the state, that trace the movement of ''P. ramorum'' from two likely initial points of establishment in Marin and Santa Cruz Counties and out to subsequent points. Early detection of ''P. ramorum'' on a landscape scale begins with the observation of symptoms on individual plants (and/or detecting ''P. ramorum'' propagules in watercourses; see below). Systematic ground-based monitoring has been difficult within the range of ''P. ramorum'' because most infected trees stand on a complex mosaic of lands with various ownerships. In some areas, targeted ground-based surveys have been conducted in areas of heavy recreation or visitor use such as parks, trailheads, and boat ramps. In California, when conducting ground-based detection, looking for symptoms on bay laurel is the most effective strategy, since ''P. ramorum'' infection of true oaks and tanoaks is almost always highly associated with bay laurel, the main epidemiological springboard for the pathogen. Moreover, on many sites in California (though not all), ''P. ramorum'' can typically be detected from infected bay laurel tissues via culturing techniques year-round; this is not the case for most other hosts, nor is it the case in Oregon, where tanoak is the most reliable host. As part of a nationwide USDA program, a ground-based detection survey was implemented from 2003 to 2006 in 39 U.S. states to determine whether the pathogen was established outside the West Coast areas already known to be infested. Sampling areas were stratified by environmental variables likely to be conducive to pathogen growth and by proximity to possible points of inoculum introduction such as nurseries. Samples were collected along transects established in potentially susceptible forests or outside the perimeters of nurseries. The only positive samples were collected in California, confirming that ''P. ramorum'' was not yet established in the environment outside the West Coast. Aerial surveying has proven useful for detection of ''P. ramorum'' infestations across large landscapes, although it is not as "early" a technique as some others because it depends on spotting dead tanoak crowns from fixed-wing aircraft. Sophisticated GPS and sketch-mapping technology enable spotters to mark the locations of dead trees so that ground crews can return to the area to sample from nearby vegetation. Detection of ''P. ramorum'' in watercourses has emerged as the earliest of early detection methods. This technique employs
pear Pears are fruits produced and consumed around the world, growing on a tree and harvested in late summer into mid-autumn. The pear tree and shrub are a species of genus ''Pyrus'' , in the Family (biology), family Rosaceae, bearing the Pome, po ...
or
rhododendron ''Rhododendron'' (; : ''rhododendra'') is a very large genus of about 1,024 species of woody plants in the Ericaceae, heath family (Ericaceae). They can be either evergreen or deciduous. Most species are native to eastern Asia and the Himalayan ...
baits suspended in the watercourse using ropes, buckets, mesh bags, or other similar devices. If plants in the watershed are infected with ''P. ramorum'', zoospores of the pathogen (as well as other ''Phytophthora'' spp.) are likely present in adjacent waterways. Under conducive weather conditions, the zoospores are attracted to the baits and infect them, causing lesions that can be isolated to culture the pathogen or analyzed via PCR assay. This method has detected ''P. ramorum'' at scales ranging from small, intermittent seasonal drainages to the Garcia, Chetco, and South Fork Eel Rivers in California and Oregon (144, 352, and 689 mi2 drainage areas, respectively). It can detect the existence of infected plants in watersheds before any mortality from the infections becomes evident. Of course, it cannot detect the exact locations of those infected plants: at the first sign of ''P. ramorum'' propagules in the stream, crews must scour the watershed using all available means to find symptomatic vegetation. A less technical means of detecting ''P. ramorum'' at the landscape level involves engaging local landowners across the landscape in the search. Many local county agriculture departments and University of California Cooperative Extension offices in California have been able to keep track of the distribution of the pathogen in their regions through reports and samples brought to them by the public. In 2008, the Garbelotto Laboratory at University of California, Berkeley, along with local collaborators, hosted a series of educational events, called "SOD Blitzes", designed to give local landowners basic information about ''P. ramorum'' and how to identify its symptoms; each participant was provided with a sampling kit, sampled a certain number of trees on his or her property, and returned the samples to the lab for analysis. This kind of
citizen science The term citizen science (synonymous to terms like community science, crowd science, crowd-sourced science, civic science, participatory monitoring, or volunteer monitoring) is research conducted with participation from the general public, or am ...
hopefully can help generate an improved map of ''P. ramorum'' distribution in the areas where the workshops are held.


Management in agriculture

Since U.S. regulators in 2004 discovered that ''P. ramorum'' had spread nationwide to a number of hosts, proactive inspections of agricultural shipments have been shown to help reduce the risk of infestations of sudden oak death. Moreover, the USDA's APHIS specifically plans to stop the spread of SOD by continuing their public outreach program and by passing regulations on the transfer of agricultural products that might be a disease vector for ''P. ramorum''. Indeed, in Oregon and California, the USDA has successfully regulated the stock of potential host plants at nurseries to "starve" the disease of potential plant hosts. Furthermore, when managing it in nurseries, it is important to consider that nursery personnel are often required to visit sites in the field such as greenhouses, fields, and other nurseries. Therefore, a number of biosecurity measures must be taken to ensure that SOD is not unintentionally transferred to one's nursery, including driving vehicles only on paved, concrete, or gravel areas at inspection sites in order avoid contact with soil organic matter that could pose as a potential disease vector.


Wildland management

The course that ''P. ramorum'' management should take depends on a number of factors, including the scale of the landscape upon which one hopes to manage it. Management of ''P. ramorum'' has been undertaken at the landscape/ regional level in Oregon in the form of a campaign to completely eradicate the pathogen from the forests in which it has been found (mostly private, but also
USDA Forest Service The United States Forest Service (USFS) is an agency within the U.S. Department of Agriculture. It administers the nation's 154 national forests and 20 national grasslands covering of land. The major divisions of the agency are the Chief's ...
and USDI
Bureau of Land Management The Bureau of Land Management (BLM) is an agency within the United States Department of the Interior responsible for administering federal lands, U.S. federal lands. Headquartered in Washington, D.C., the BLM oversees more than of land, or one ...
ownership). The eradication campaign involves vigorous early detection by airplane and watercourse monitoring, a U.S. Department of Agriculture Animal and Plant Health Inspection Service (USDA APHIS) and Oregon Department of Agriculture-led
quarantine A quarantine is a restriction on the movement of people, animals, and goods which is intended to prevent the spread of disease or pests. It is often used in connection to disease and illness, preventing the movement of those who may have bee ...
to prevent movement of host materials out of the area where infected trees are found, and immediate removal of ''P. ramorum'' host vegetation, symptomatic or not, within a buffer around each infected tree. The Oregon eradication effort, which began near the town of Brookings in southwest Oregon in 2001, has adapted its management efforts over the years in response to new information about ''P. ramorum''. For example, after inoculation trials of various tree species more clearly delineated which hosts are susceptible, the Oregon cooperators began leaving nonhost species such as
Douglas fir The Douglas fir (''Pseudotsuga menziesii'') is an evergreen conifer species in the pine family, Pinaceae. It is the tallest tree in the Pinaceae family. It is native to western North America and is also known as Douglas-fir, Douglas spruce, Or ...
and red alder on site. In another example, after finding that a small percentage of tanoak stumps that were resprouting on the host removal sites were infected with the pathogen—whether these infections were systemic or reached the sprouts from the surrounding environment is unknown—the cooperators began pretreating trees with very small, targeted amounts of
herbicide Herbicides (, ), also commonly known as weed killers, are substances used to control undesired plants, also known as weeds.EPA. February 201Pesticides Industry. Sales and Usage 2006 and 2007: Market Estimates. Summary in press releasMain page f ...
to kill the root systems of infected tanoaks before cutting them down. The effort has been successful in that while it has not yet completely eradicated the pathogen from Oregon forests, the epidemic in Oregon has not taken the explosive course that it has in California forests. California, though, faces significant obstacles that preclude it from mounting the same kind of eradication effort. For one thing, the organism was too well established in forests in the Santa Cruz and
San Francisco Bay San Francisco Bay (Chochenyo language, Chochenyo: 'ommu) is a large tidal estuary in the United States, U.S. state of California, and gives its name to the San Francisco Bay Area. It is dominated by the cities of San Francisco, California, San ...
areas by the time the cause of sudden oak death was discovered to enable any eradication effort to succeed. Even in still relatively uninfested areas of the north coast and southern
Big Sur Big Sur () is a rugged and mountainous section of the Central Coast (California), Central Coast of the U.S. state of California, between Carmel Highlands and San Simeon, where the Santa Lucia Range, Santa Lucia Mountains rise abruptly from th ...
, regionally coordinated efforts to manage the pathogen face huge challenges of leadership, coordination, and funding. Nevertheless, land managers are still working to coordinate efforts between states, counties, and agencies to provide ''P. ramorum'' management in a more comprehensive manner. Several options exist for landowners who want to limit the impacts of SOD death on their properties. None of these options is foolproof, guaranteed to eradicate ''P. ramorum'', or guaranteed to prevent a tree from becoming infected. Some are still in the initial stage of testing. Nevertheless, when used thoughtfully and thoroughly, some of the treatments do improve the likelihood of either slowing the spread of the pathogen or of limiting its impacts on trees or stands of trees. Assuming that the landowner has correctly identified the host tree(s) and symptom(s), has submitted a sample to a local authority to send to an approved laboratory for testing, and has received confirmation that the tree(s) are indeed infected with ''P. ramorum''—or, alternatively, assuming that the landowner knows that ''P. ramorum''-infected trees are nearby and wants to protect the resources on his or her property—he or she can attempt control by cultural (individual-tree), chemical, or silvicultural (stand-level) means. The best evidence that cultural techniques might help protect trees against ''P. ramorum'' comes from research that has established a correlation between disease risk in coast live oak trees and the trees' proximity to bay laurel. In particular, this research found that bay laurel trees growing within 5 m of the trunk of an oak tree were the best predictors of disease risk. This implies that strategic removal of bay laurel trees near coast live oaks might decrease the risk of oak infection. Wholesale removal of bay laurel trees would not be warranted, since the bay laurels close to the oak trees appear to provide the greatest risk factor. Whether the same pattern is true for other oaks or tanoaks has yet to be established. Research on this subject has been started for tanoak, but any eventual cultural recommendations will be more complicated, because tanoak twigs also serve as sources of ''P. ramorum'' inoculum. An initially promising treatment for preventing infection of individual oak and tanoak trees—not for curing an already established infection—is a
phosphonate In organic chemistry, phosphonates or phosphonic acids are organophosphorus compounds containing Functional group, groups, where R is an organic group (alkyl, aryl). If R is hydrogen then the compound is a Phosphite_ester#Chemistry_of_HP(O)(OR ...
fungicide Fungicides are pesticides used to kill parasitic fungi or their spores. Fungi can cause serious damage in agriculture, resulting in losses of yield and quality. Fungicides are used both in agriculture and to fight fungal infections in animals, ...
marketed under the trade name Agri-fos. Phosphonate is a neutralized form of phosphorous acid that works not by direct antagonism of ''Phytophthora'', but by stimulating various kinds of immune responses on the part of the tree. It is mostly environmentally benign if not applied to nontarget plants and can be applied either as an injection into the tree stem or as a spray to the bole. When applying Agri-fos as a spray, it must be combined with an organosilicate
surfactant Surfactants are chemical compounds that decrease the surface tension or interfacial tension between two liquids, a liquid and a gas, or a liquid and a solid. The word ''surfactant'' is a Blend word, blend of "surface-active agent", coined in ...
, Pentra-bark, to enable the product to adhere to the tree trunk long enough to be absorbed by the tree. Agri-fos has been very effective in preventing tree infections, but it must be applied when visible symptoms of ''P. ramorum'' on other trees in the immediate neighborhood are still relatively distant; otherwise, the tree to be treated likely is already infected, but visible symptoms have not yet developed (especially true for tanoak). However, later extensive field trials showed that phosphonate (also called phosphite) had little if any beneficial effect. Trials of silvicultural methods for treating ''P. ramorum'' began in Humboldt County in northwest coastal California in 2006. The trials have taken place on a variety of infested properties both private and public and have generally focused on varying levels and kinds of host removal. The largest () and most replicated trials have involved removal of tanoak and bay laurel by
chainsaw A chainsaw (or chain saw) is a portable handheld power saw, power saw that cuts with a set of teeth attached to a rotating chain driven along a guide bar. Modern chainsaws are typically gasoline or electric and are used in activities such as t ...
throughout the infested stand, both with and without subsequent underburning designed to eliminate small seedlings and infested leaf litter. Other treatments included host removal in a modified "shaded fuelbreak" design in which all bay laurel is removed, but not all tanoaks; bay and tanoak removal using herbicides; and removal of bay laurel alone. The results of these treatments are still being monitored, but repeated sampling has so far detected only very small amounts of ''P. ramorum'' in the soil or on vegetation in the treated sites.


Nursery management

Research and development in managing ''P. ramorum'' in nursery settings extends from ''P. ramorum'' in the individual plant, to ''P. ramorum'' in the nursery environment, to the pathogen's movement across state and national borders in infected plants. An array of studies have tested the curative and protective effects of various chemical compounds against ''P. ramorum'' in plants valued as ornamentals or Christmas trees. Many studies have focused on the four main ornamental hosts of ''P. ramorum'' (''
Rhododendron ''Rhododendron'' (; : ''rhododendra'') is a very large genus of about 1,024 species of woody plants in the Ericaceae, heath family (Ericaceae). They can be either evergreen or deciduous. Most species are native to eastern Asia and the Himalayan ...
'', ''
Camellia ''Camellia'' (pronounced or ) is a genus of flowering plants in the family Theaceae. They are found in tropical and subtropical areas in East Asia, eastern and South Asia, southern Asia, from the Himalayas east to Japan and Indonesia. There are ...
'', ''
Viburnum ''Viburnum'' is a genus of about 150–175 species of flowering plants in the moschatel family, Adoxaceae. Its current classification is based on molecular phylogeny. It was previously included in the honeysuckle family Caprifoliaceae. The memb ...
'', and '' Pieris''). Several effective compounds have been found; some of the most effective include mefenoxam, metalaxyl, dimethomorph, and fenamidone. Many of these studies have converged upon the following conclusions: chemical compounds are, in general, more effective as preventives than as curatives; when used preventively, chemical compounds must be reapplied at various intervals; and chemical compounds can mask the symptoms of ''P. ramorum'' infection in the host plant, potentially interfering with inspections for quarantine efforts. In general, these compounds suppress but do not eradicate the pathogen, and some researchers are concerned that with repeated use the pathogen may become resistant to them. These studies and conclusions are summarized by Kliejunas. Another area of research and evolving practice deals with eliminating ''P. ramorum'' from nursery environments in which it is established to prevent human-mediated pathogen movement within the ornamental plant trade. One way of approaching this is through a robust quarantine and inspection program, which the various federal and state regulatory agencies have implemented. Under the federal ''P. ramorum'' quarantine program implemented by USDA
APHIS ''Aphis'' is a genus of insects in the family Aphididae containing at least 600 species of aphids. It includes many notorious Pest (organism), agricultural pests, such as the soybean aphid ''Aphis glycines''. Many species of ''Aphis'', such as ' ...
, nurseries in California, Oregon, and Washington are regulated and must participate in an annual inspection regimen; nurseries in the 14 infested counties in coastal California, plus the limited infested area in Curry County, Oregon, must participate in a more stringent inspection schedule when shipping out of this area. Much of the research into disinfesting nurseries has focused on the voluntary best management practices (BMPs) that nurseries can implement to prevent ''P. ramorum's'' introduction into the nursery and movement from plant to plant. In 2008, a group of nursery industry organizations issued a list of BMPs that includes subsections on pest prevention/management, training, internal/external monitoring/audits, records/traceability, and documentation. The document includes such specific recommendations as "Avoid overhead
irrigation Irrigation (also referred to as watering of plants) is the practice of applying controlled amounts of water to land to help grow crops, landscape plants, and lawns. Irrigation has been a key aspect of agriculture for over 5,000 years and has bee ...
of high-risk plants"; "After every
crop rotation Crop rotation is the practice of growing a series of different types of crops in the same area across a sequence of growing seasons. This practice reduces the reliance of crops on one set of nutrients, pest and weed pressure, along with the pro ...
, disinfect propagation mist beds, sorting area, cutting benches, machines and tools to minimize the spread or introduction of pathogens"; and "Nursery personnel should attend one or more ''P. ramorum ''trainings conducted by qualified personnel or document self-training". Research on control of ''P. ramorum'' in nurseries has also focused on disinfesting irrigation water containing ''P. ramorum'' inoculum. Irrigation water can become infested from bay trees in the forest (if the irrigation source is a stream), from bay trees overhanging irrigation ponds, from runoff from infested forests, or from recirculated irrigation water. Experiments in Germany with three types of filters— slow sand filters, lava filters, and constructed wetlands—showed that the first two removed ''P. ramorum'' from the irrigation water completely, while 37% of the post-treatment water samples from the constructed wetland still contained ''P. ramorum''. Along with proper irrigation practices, ground cover can be an effective management practice for ornamental plants in nursery settings. Covering the ground with a 5 to 7 cm layer of gravel can prevent splash dispersal of propagules onto ornamental plants that are grown in containers. This practice can also significantly suppress the disease. Since ''P. ramorum'' can persist for an undetermined period of time within the soil profile, management programs in nurseries should also deal with delineating the pathogen's distribution in nursery soil and eliminating it from infested areas. A variety of chemical options has been tested for soil disinfestation, including such chemicals as
chloropicrin Chloropicrin, also known as PS (from Port Sunlight) and nitrochloroform, is a chemical compound currently used as a broad-spectrum antimicrobial, fungicide, herbicide, insecticide, and nematicide. It was used as a poison gas in World War I and the ...
, metham sodium, iodomethane, and dazomet. Lab tests indicated that all of these chemicals were effective when applied to infested soil in glass jars. Additionally, tests on volunteer nurseries with infested soil demonstrated that dazomet (trade name Basamid) fumigation followed by a 14-day tarping period successfully removed ''P. ramorum'' from the soil profile. Other soil disinfestation practices under investigation, or in which interest has been expressed, include steam sterilization, solarization, and paving of infested areas.


General sanitation in infested areas

One of the most important aspects of ''P. ramorum'' control involves interrupting the human-mediated movement of the pathogen by ensuring that infested materials do not move from location to location. While enforceable quarantines perform part of this function, basic cleanliness when working or recreating in infested areas is also important. In most cases, cleanliness practices involve ridding potentially infested surfaces—such as shoes, vehicles, and pets—of foliage and mud before leaving the infested area. The demands of implementing these practices become more complex when large numbers of people are working in infested areas, as in construction, timber harvesting, or
wildfire suppression Wildfire suppression is a range of firefighting tactics used to suppress wildfires. Firefighting efforts depend on many factors such as the available fuel, the local atmospheric conditions, the features of the terrain, and the size of the wildfir ...
. The
California Department of Forestry and Fire Protection The California Department of Forestry and Fire Protection, colloquially known as CAL FIRE, is the fire department of the California Natural Resources Agency in the U.S. state of California. It is responsible for fire protection in various area ...
and USDA Forest Service have implemented guidelines and mitigation requirements for the latter two situations; basic information about cleanliness in ''P. ramorum''-infested areas can be found at the California Oak Mortality Task Force web site
www.suddenoakdeath.org
under the "Treatment and Management" section (subsection "Sanitation and Reducing Spread").


Government agency involvement

In
England England is a Countries of the United Kingdom, country that is part of the United Kingdom. It is located on the island of Great Britain, of which it covers about 62%, and List of islands of England, more than 100 smaller adjacent islands. It ...
in 2009, the
Forestry Commission The Forestry Commission is a non-ministerial government department responsible for the management of publicly owned forests and the regulation of both public and private forestry in England. The Forestry Commission was previously also respons ...
, DEFRA, the Food and Environment Research Agency, Cornwall County Council, and
Natural England Natural England is a non-departmental public body in the United Kingdom sponsored by the Department for Environment, Food and Rural Affairs. It is responsible for ensuring that England's natural environment, including its land, flora and fauna, ...
are working together to record the locations and deal with this disease. Natural England is offering grant funding through its
Environmental Stewardship Environmental stewardship (or planetary stewardship) refers to the responsible use and protection of the natural environment through active participation in conservation efforts and sustainable practices by individuals, small groups, nonprofit org ...
, Countryside Stewardship, and Environmentally Sensitive Area schemes to clear rhododendron. In 2011, the
Forestry Commission The Forestry Commission is a non-ministerial government department responsible for the management of publicly owned forests and the regulation of both public and private forestry in England. The Forestry Commission was previously also respons ...
started felling of
larch Larches are deciduous conifers in the genus ''Larix'', of the family Pinaceae (subfamily Laricoideae). Growing from tall, they are native to the cooler regions of the northern hemisphere, where they are found in lowland forests in the high la ...
forest in the south-west of England, as an attempt to halt the spread of the disease. In 2023 the Forestry Commission issued a Statutory Plant Health Notice to Sheffield and Rotherham Wildlife Trust ordering it to remove over 1,000 trees at their nature reserve at Wyming Brook. In Northern Ireland at the end of 2011, the Department of Agriculture and Rural Development's Forest Service began felling 14 hectares of affected Larch woodland at Moneyscalp, on the edge of Tollymore Forest Park in County Down.


See also

*
Acute oak decline Acute oak decline (AOD) is a disease that infects oak trees originally described in the UK. It mainly affects mature oak trees of over 50 years old of both Britain's native oak species: the pedunculate oak (''Quercus robur'') and the sessile oak ...
*
Forest pathology Forest pathology is the research of both biotic and abiotic maladies affecting the health of a forest ecosystem, primarily fungal pathogens and their insect vectors. It is a subfield of forestry and plant pathology. Forest pathology is part ...
* Forest disturbance of invasive insects and diseases in the United States


References


External links


California Oak Mortality Task Force

Ramorum disease
United Kingdom Forestry Commission
Sudden Oak Death
Center for Invasive Species Research
Species Profile- Sudden Oak Death (''Phytophthora ramorum'')
National Invasive Species Information Center,
United States National Agricultural Library The United States National Agricultural Library (NAL) is one of the world's largest agricultural research libraries, and serves as a national library of the United States and as the library of the United States Department of Agriculture. Locate ...
. General information and resources for Sudden Oak Death.
Gallery of Pests — Sudden Oak Death Syndrome
Don't Move Firewood {{DEFAULTSORT:Phytophthora ramorum ramorum Tree diseases Water mould plant pathogens and diseases Biota of California Natural history of the California chaparral and woodlands Quercus Protists described in 1995