Perkinsea
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Perkinsids are single-celled
protists A protist ( ) or protoctist is any Eukaryote, eukaryotic organism that is not an animal, Embryophyte, land plant, or fungus. Protists do not form a Clade, natural group, or clade, but are a Paraphyly, paraphyletic grouping of all descendants o ...
that live as intracellular parasites of a variety of other organisms. They are classified as the
class Class, Classes, or The Class may refer to: Common uses not otherwise categorized * Class (biology), a taxonomic rank * Class (knowledge representation), a collection of individuals or objects * Class (philosophy), an analytical concept used d ...
Perkinsea within the monotypic
phylum In biology, a phylum (; : phyla) is a level of classification, or taxonomic rank, that is below Kingdom (biology), kingdom and above Class (biology), class. Traditionally, in botany the term division (taxonomy), division has been used instead ...
Perkinsozoa. It is part of the
eukaryotic The eukaryotes ( ) constitute the Domain (biology), domain of Eukaryota or Eukarya, organisms whose Cell (biology), cells have a membrane-bound cell nucleus, nucleus. All animals, plants, Fungus, fungi, seaweeds, and many unicellular organisms ...
supergroup Alveolata, along with
dinoflagellate The Dinoflagellates (), also called Dinophytes, are a monophyletic group of single-celled eukaryotes constituting the phylum Dinoflagellata and are usually considered protists. Dinoflagellates are mostly marine plankton, but they are also commo ...
s, their closest relatives, and another parasitic group known as Apicomplexa. Perkinsids are found in aquatic environments, as parasites of dinoflagellates and various animals.


Description

All known Perkinsozoa are intracellular parasites of a range of organisms, particularly microalgae and animals. Species of Parviluciferaceae, Pararosariidae and '' Maranthos'' are parasites of dinoflagellates. '' Rastrimonas'' parasitize cryptophyte algae. Xcellidae, Perkinsidae and '' Acrocoelus'' are parasites of various animals:
fish A fish (: fish or fishes) is an aquatic animal, aquatic, Anamniotes, anamniotic, gill-bearing vertebrate animal with swimming fish fin, fins and craniate, a hard skull, but lacking limb (anatomy), limbs with digit (anatomy), digits. Fish can ...
, bivalve molluscs and acorn worms, respectively. Perkinsozoa are found in aquatic environments, both marine and freshwater.


Systematics


Taxonomic history

Perkinsids were first described by Norman D. Levine in 1978, as the class Perkinsea within Alveolata. Levine only included one
genus Genus (; : genera ) is a taxonomic rank above species and below family (taxonomy), family as used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In bino ...
, ''
Perkinsus ''Perkinsus'' is a genus of alveolates in the phylum Perkinsozoa. The genus was erected in 1978 to better treat its type species, '' Perkinsus marinus'', known formerly as ''Dermocystidium marinum''. These are parasitic protozoans that infect ...
'', described in the same publication. Later, the same author treated this group as class Perkinsasida within the phylum Apicomplexa, suggesting that ''Perkinsus'' is the most primitive apicomplexan. However, this placement was controversial, and was later disproven by
phylogenetic analyses In biology, phylogenetics () is the study of the evolutionary history of life using observable characteristics of organisms (or genes), which is known as Computational phylogenetics, phylogenetic inference. It infers the relationship among organ ...
that proved more evolutionary proximity to
dinoflagellate The Dinoflagellates (), also called Dinophytes, are a monophyletic group of single-celled eukaryotes constituting the phylum Dinoflagellata and are usually considered protists. Dinoflagellates are mostly marine plankton, but they are also commo ...
s than to apicomplexans. In 1999, with the discovery of '' Parvilucifera'', biologists Fredrik Norén and Øjvind Moestrup separated the class Perkinsea into a new phylum Perkinsozoa, within the Alveolata, to accommodate these two genera. In 2002 a third genus was described, '' Cryptophagus'' (now renamed '' Rastrimonas''), but it was never genetically sequenced, which makes its phylogenetic position uncertain. In 2014 a new class was added to the phylum, known as Squirmidea. However, phylogenetic analyses later demonstrated that squirmids are more closely related to the clade uniting Apicomplexa and Colpodellida than to dinoflagellates and perkinsids, and its status as a class of Perkinsozoa was rejected, making Perkinsea the only remaining class.


Phylogeny

Perkinsids are a
monophyletic In biological cladistics for the classification of organisms, monophyly is the condition of a taxonomic grouping being a clade – that is, a grouping of organisms which meets these criteria: # the grouping contains its own most recent co ...
group (or
clade In biology, a clade (), also known as a Monophyly, monophyletic group or natural group, is a group of organisms that is composed of a common ancestor and all of its descendants. Clades are the fundamental unit of cladistics, a modern approach t ...
) of Alveolata, a large group of ecologically diverse protists such as dinoflagellates,
ciliate The ciliates are a group of alveolates characterized by the presence of hair-like organelles called cilia, which are identical in structure to flagellum, eukaryotic flagella, but are in general shorter and present in much larger numbers, with a ...
s, apicomplexans and chrompodellids, all characterized by the presence of cortical alveoli below their
cell membrane The cell membrane (also known as the plasma membrane or cytoplasmic membrane, and historically referred to as the plasmalemma) is a biological membrane that separates and protects the interior of a cell from the outside environment (the extr ...
. In particular, perkinsids are the
sister group In phylogenetics, a sister group or sister taxon, also called an adelphotaxon, comprises the closest relative(s) of another given unit in an evolutionary tree. Definition The expression is most easily illustrated by a cladogram: Taxon A and ...
of dinoflagellates, together forming a clade known as Dinozoa. Both groups, along with apicomplexans and their closest relatives, compose a clade known as Myzozoa.


Classification

As of 2023, the order-level classification of perkinsids remains ambiguous, and orders are very sparsely used. The families Pararosariidae and Parviluciferaceae have no assigned parent order, although one author, Thomas Cavalier-Smith, previously placed '' Parvilucifera'' within the order Rastrimonadida, along with '' Rastrimonas''. This has not been supported by any other author, and both Rastrimonadida and ''Rastrimonas'' are omitted from current classifications for lacking molecular data. Similarly, the genus '' Acrocoelus'', assigned directly to the order Acrocoelida without a family, is also excluded due to the absence of molecular data. The genus '' Maranthos'', although genetically sequenced, is not assigned to any family or order. The remaining groups, Perkinsidae and Xcellidae, are only sometimes assigned to order Perkinsida, while in other instances their parent taxon is directly Perkinsea. Taxonomic ranks (i.e. families, orders, classes...) are mostly omitted in favour of using only
clade In biology, a clade (), also known as a Monophyly, monophyletic group or natural group, is a group of organisms that is composed of a common ancestor and all of its descendants. Clades are the fundamental unit of cladistics, a modern approach t ...
s. Shown below is the commonly accepted scheme, omitting order-level taxa: * '' Maranthos'' * Family Pararosariidae ** '' Pararosarium'' * Family Parviluciferaceae ** '' Dinovorax'' ** '' Parvilucifera'' ** '' Snorkelia'' ** '' Tuberlatum'' * Family Perkinsidae ** ''
Perkinsus ''Perkinsus'' is a genus of alveolates in the phylum Perkinsozoa. The genus was erected in 1978 to better treat its type species, '' Perkinsus marinus'', known formerly as ''Dermocystidium marinum''. These are parasitic protozoans that infect ...
'' * Family Xcellidae ** '' Cryoxcellia'' ** '' Gadixcellia'' ** '' Notoxcellia'' ** '' Salmoxcellia'' ** '' Xcellia'' As mentioned above, two genera have uncertain placement because they have never been genetically sequenced, but they have been assigned to Perkinsea on the basis of their morphology: * '' Rastrimonas'' * '' Acrocoelus''


References

{{Taxonbar, from1=Q7169069, from2=Q15156941 Perkinsozoa Alveolata classes Veterinary protozoology Taxa described in 1978