HT-29
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HT-29 is a human
colon cancer Colorectal cancer (CRC), also known as bowel cancer, colon cancer, or rectal cancer, is the development of cancer from the colon or rectum (parts of the large intestine). Signs and symptoms may include blood in the stool, a change in bowel ...
cell line An immortalised cell line is a population of cells from a multicellular organism that would normally not proliferate indefinitely but, due to mutation, have evaded normal cellular senescence and instead can keep undergoing division. The cells ...
used extensively in biological and cancer research.


Characteristics

The HT-29 cell line was established in 1964 from the tumor of a 44-year-old Caucasian female with colorectal adenocarcinoma by Dr. Jorgen Fogh at the
Memorial Sloan Kettering Cancer Center Memorial Sloan Kettering Cancer Center (MSK or MSKCC) is a cancer treatment and research institution in Manhattan in New York City. MSKCC is one of 72 National Cancer Institute– designated Comprehensive Cancer Centers. Its main campus is ...
. HT-29 cells grow in a tight monolayer and share similar features with small intestinal
enterocytes Enterocytes, or intestinal absorptive cells, are simple columnar epithelial cells which line the inner surface of the small and large intestines. A glycocalyx surface coat contains digestive enzymes. Microvilli on the apical surface increase i ...
. Under specific conditions, such as
glucose Glucose is a sugar with the Chemical formula#Molecular formula, molecular formula , which is often abbreviated as Glc. It is overall the most abundant monosaccharide, a subcategory of carbohydrates. It is mainly made by plants and most algae d ...
deprivation or exposure to differentiation-inducing agents like sodium butyrate, these cells develop epithelial cell morphology, characterized by
microvilli Microvilli (: microvillus) are microscopic cellular membrane protrusions that increase the surface area for diffusion and minimize any increase in volume, and are involved in a wide variety of functions, including absorption, secretion, cellula ...
and well-defined
tight junctions Tight junctions, also known as occluding junctions or ''zonulae occludentes'' (singular, ''zonula occludens''), are multiprotein junctional complexes between epithelial cells, sealing and preventing leakage of solutes and water. They also play a ...
.


Genetic characteristics and mutations

HT-29 cells carry several genetic alterations common in colorectal
carcinomas Carcinoma is a malignancy that develops from epithelial cells. Specifically, a carcinoma is a cancer that begins in a tissue that lines the inner or outer surfaces of the body, and that arises from cells originating in the endodermal, mesoderm ...
, most notably mutations in the tumor suppressor genes
TP53 p53, also known as tumor protein p53, cellular tumor antigen p53 (UniProt name), or transformation-related protein 53 (TRP53) is a regulatory transcription factor protein that is often mutated in human cancers. The p53 proteins (originally thou ...
and APC, and in the
oncogene An oncogene is a gene that has the potential to cause cancer. In tumor cells, these genes are often mutated, or expressed at high levels.
BRAF. Specifically, HT-29 cells overproduce the
p53 p53, also known as tumor protein p53, cellular tumor antigen p53 (UniProt name), or transformation-related protein 53 (TRP53) is a regulatory transcription factor protein that is often mutated in human cancers. The p53 proteins (originally thou ...
tumor antigen Tumor antigen is an antigenic substance produced in tumor cells, i.e., it triggers an immune response in the host. Tumor antigens are useful tumor markers in identifying tumor cells with diagnostic tests and are potential candidates for use in ...
, but have a mutation in the p53 gene at position 273, resulting in a
histidine Histidine (symbol His or H) is an essential amino acid that is used in the biosynthesis of proteins. It contains an Amine, α-amino group (which is in the protonated –NH3+ form under Physiological condition, biological conditions), a carboxylic ...
replacing an
arginine Arginine is the amino acid with the formula (H2N)(HN)CN(H)(CH2)3CH(NH2)CO2H. The molecule features a guanidinium, guanidino group appended to a standard amino acid framework. At physiological pH, the carboxylic acid is deprotonated (−CO2−) a ...
. This mutation is associated with altered tumor suppressor functions, increased cellular proliferation, and resistance to
apoptosis Apoptosis (from ) is a form of programmed cell death that occurs in multicellular organisms and in some eukaryotic, single-celled microorganisms such as yeast. Biochemistry, Biochemical events lead to characteristic cell changes (Morphology (biol ...
. HT-29 cells also exhibit deregulated expression of the ''
c-myc ''Myc'' is a family of regulator genes and proto-oncogenes that code for transcription factors. The ''Myc'' family consists of three related human genes: ''c-myc'' ( MYC), ''l-myc'' ( MYCL), and ''n-myc'' ( MYCN). ''c-myc'' (also sometimes ...
'' oncogene. Although deregulated, ''c-myc'' expression is closely linked with their responsiveness to
growth factors A growth factor is a naturally occurring substance capable of stimulating cell proliferation, wound healing, and occasionally cellular differentiation. Usually it is a secreted protein or a steroid hormone. Growth factors are important for regu ...
and nutrient availability, suggesting a connection between oncogenic signaling pathways and their proliferative capacity. The BRAF V600E mutation in these cells constantly activates the MAP kinase signaling pathway. This fruther contributes to cellular proliferation, survival, and resistance to various therapeutic agents. Overall, these characteristics make HT-29 cells a valuable model for studying colorectal cancer
pathogenesis In pathology, pathogenesis is the process by which a disease or disorder develops. It can include factors which contribute not only to the onset of the disease or disorder, but also to its progression and maintenance. The word comes . Descript ...
and treatment strategies.


Culturing


Growth requirements

HT-29 cells are relatively easy to culture and maintain, which is why they are widely used as an ''in vitro'' colorectal cancer model. They grow as adherent monolayers with an epithelial-like morphology and require specific conditions for optimal growth, cell viability, and reproducibility of experimental outcomes. Though HT-29 cells can proliferate in cell culture lacking growth factors with a doubling time of around 4 days, the doubling time can be reduced to one day with added fetal bovine serum. The cells have high glucose consumption, and in standard medium containing 25 mM glucose and 10% serum, remain undifferentiated.


Media and environment

HT-29 cells are typically cultured in DMEM, a medium supplemented with 10% fetal bovine serum and antibiotics such as penicillin-streptomycin to prevent contamination. Standard DMEM with a glucose concentration of around 4.5 g/L supports the cells' high metabolic activity. Typically, cells are maintained at 37°C in a humidified incubator with 5% CO₂, at a pH of about 7.4. In these conditions, HT-29 cells have a doubling time of approximately 20-30 hours.


Passaging

HT-29 cells are generally passaged every 2-3 days at about 70-80%
confluency In cell culture biology, confluence refers to the percentage of the surface of a culture dish that is covered by adherent cells. For example, 50 percent confluence means roughly half of the surface is covered, while 100 percent confluence means ...
to maintain optimal growth.
Passaging In biology, a subculture is either a new cell culture or a microbiological culture made by transferring some or all cell (biology), cells from a previous culture to fresh growth medium. This action is called subculturing or passaging the cells. Su ...
involved washing cells with phosphate-buffered saline (PBS), briefly detaching them using 0.25%
trypsin Trypsin is an enzyme in the first section of the small intestine that starts the digestion of protein molecules by cutting long chains of amino acids into smaller pieces. It is a serine protease from the PA clan superfamily, found in the dig ...
solution. The trypsin is neutralized with serum-containing medium, and the cells are re-plated at suitable split ratios, typically between 1:3 to 1:6. If cells are treated with too much trypsin, the prolonged exposure may negatively impact cell viability.


Differentiation

HT-29 cells do not spontaneously differentiate under standard culture conditions. However, their differentiation into enterocyte-like cells can be induced through specific culture modifications or chemical treatments, allowing them to better replicate intestinal epithelial physiology. Common approaches to induce HT-29 differentiation include: *Glucose deprivation: Culturing in glucose-limited medium (~1 g/L glucose) prompts HT-29 cells to differentiate into polarized enterocyte-like cells. Under these conditions, cells exhibit tighter junctions, an apical
brush border A brush border (striated border or brush border membrane) is the microvillus-covered surface of simple cuboidal and simple columnar epithelium found in different parts of the body. Microvilli are approximately 100 nanometers in diameter and th ...
with microvilli, and express typical intestinal enzymes. *Sodium Butyrate Treatment: Treatment with sodium butyrate (2-5 mM) stimulates differentiation that causes increased expression of intestinal brush-border enzymes, polarization, and microvilli formation. This model mimics the differentiated features of mature colonic epithelial cells. *Methotrexate (MTX) Selection: Treatment with
methotrexate Methotrexate, formerly known as amethopterin, is a chemotherapy agent and immunosuppressive drug, immune-system suppressant. It is used to treat cancer, autoimmune diseases, and ectopic pregnancy, ectopic pregnancies. Types of cancers it is u ...
selects a mucus-secreting subpopulation known as HT29-MTX. These cells differentiate into
columnar Epithelium or epithelial tissue is a thin, continuous, protective layer of cells with little extracellular matrix. An example is the epidermis, the outermost layer of the skin. Epithelial ( mesothelial) tissues line the outer surfaces of many ...
, mucus-producing epithelial cells. This subpopulation can be a valuable model for studying intestinal barrier functions, mucosal biology, and interactions with
microbiota Microbiota are the range of microorganisms that may be commensal, mutualistic, or pathogenic found in and on all multicellular organisms, including plants. Microbiota include bacteria, archaea, protists, fungi, and viruses, and have been found ...
. These differentiation methods allow researchers to adapt HT-29 cells to study gastrointestinal physiology, pharmaceutical research, and microbiomes.


Cryopreservation

Proper
cryopreservation Cryopreservation or cryoconservation is a process where biological material - cells, tissues, or organs - are frozen to preserve the material for an extended period of time. At low temperatures (typically or using liquid nitrogen) any cell ...
allows for the long-term storage of HT-29 cells, ensuring their availability and genetic stability for ongoing research. It is important to optimize cryopreservation to maximize cell viability upon thawing. HT-29 cells are cryopreserved using a freezing medium consisting of 90% fetal bovine serum and 10% dimethyl sulfoxide (
DMSO Dimethyl sulfoxide (DMSO) is an organosulfur compound with the formula . This colorless liquid is the sulfoxide most widely used commercially. It is an important polar aprotic solvent that dissolves both polar and nonpolar compounds and is ...
). DMSO is a cryoprotectant to minimize ice crystal formation and cellular damage during freezing. Cells should be slowly frozen at a controlled rate (~1°C per minute), typically using a controlled-rate freezing apparatus or an isopropanol-based container. One frozen, cells are stored in
liquid nitrogen Liquid nitrogen (LN2) is nitrogen in a liquid state at cryogenics, low temperature. Liquid nitrogen has a boiling point of about . It is produced industrially by fractional distillation of liquid air. It is a colorless, mobile liquid whose vis ...
at -196°C.


Applications


In vitro research

In preclinical research, HT-29 cells are valued for their ability to mimic colon tissue ''in vitro'' through induced differentiation. HT-29 cells terminally differentiate into enterocytes with the replacement of glucose by
galactose Galactose (, ''wikt:galacto-, galacto-'' + ''wikt:-ose#Suffix 2, -ose'', ), sometimes abbreviated Gal, is a monosaccharide sugar that is about as sweetness, sweet as glucose, and about 65% as sweet as sucrose. It is an aldohexose and a C-4 epime ...
in cell culture. When treated with
butyrate The conjugate acids are in :Carboxylic acids. {{Commons category, Carboxylate ions, Carboxylate anions Carbon compounds Anions ...
or acids, the differentiation pathways can be closely studied along with their dependence on surrounding conditions. Studies of HT-29 cells have also demonstrated induced differentiation in response to
forskolin Forskolin (coleonol) is a labdane diterpene produced by the plant '' Coleus barbatus'' (blue spur flower). Other names include pashanabhedi, Indian coleus, makandi, HL-362, mao hou qiao rui hua. As with other members of the large diterpene class o ...
,
Colchicine Colchicine is a medication used to prevent and treat gout, to treat familial Mediterranean fever and Behçet's disease, and to reduce the risk of myocardial infarction. The American College of Rheumatology recommends colchicine, nonstero ...
,
nocodazole Nocodazole is an antineoplastic agent which exerts its effect in cells by interfering with the polymerization of microtubules. Microtubules are one type of fibre which constitutes the cytoskeleton, and the dynamic microtubule network has se ...
, and
taxol Paclitaxel, sold under the brand name Taxol among others, is a chemotherapy medication used to treat ovarian cancer, esophageal cancer, breast cancer, lung cancer, Kaposi's sarcoma, cervical cancer, and pancreatic cancer. It is administered by ...
, with galactose-mediated differentiation also strengthening
adherens junctions In cell biology, adherens junctions (or zonula adherens, intermediate junction, or "belt desmosome") are protein complexes that occur at cell–cell junctions and cell–matrix junctions in epithelial and endothelial tissues, usually more basal ...
.


Xenograft models

HT-29 cells can also be tested ''in vivo'' via
xenografts Xenotransplantation (''xenos-'' from the Greek meaning "foreign" or strange), or heterologous transplant, is the transplantation of living cells, tissues or organs from one species to another.immunodeficient Immunodeficiency, also known as immunocompromise, is a state in which the immune system's ability to fight infectious diseases and cancer is compromised or entirely absent. Most cases are acquired ("secondary") due to extrinsic factors that affec ...
rodents. These models are useful for investigating tumor growth, epithelial function, and pharmacokinetics in a controlled and biologically relevant environment.


Cancer research

HT-29 cells serve as a fundamental research model in colorectal cancer biology due to their close representation of the genetic and molecular characteristics typical of colorectal adenocarcinomas. The critical mutations carried by these cells, such as the TP53 mutation, APC mutation, and unregulated ''c-myc'' expression contribute significantly to colorectal cancer development and progression. Due to their ability to form tumors when xenografted into rodents, HT-29 cells facilitate ''in vivo'' studies of tumor growth dynamics, tumor
angiogenesis Angiogenesis is the physiological process through which new blood vessels form from pre-existing vessels, formed in the earlier stage of vasculogenesis. Angiogenesis continues the growth of the vasculature mainly by processes of sprouting and ...
,
metastatic Metastasis is a pathogenic agent's spreading from an initial or primary site to a different or secondary site within the host's body; the term is typically used when referring to metastasis by a cancerous tumor. The newly pathological sites, ...
behavior, and tumor-host interactions. Recent studies have utilized HT-29 cells in xenograft models to examine colorectal tumor evasion strategies, showing that these tumors promote immunosuppressive microenvironments characterized by recruitment and activation of
regulatory T cells The regulatory T cells (Tregs or Treg cells), formerly known as suppressor T cells, are a subpopulation of T cells that modulate the immune system, maintain immune tolerance, tolerance to self-antigens, and prevent autoimmune disease. Treg  ...
, myeloid-derived suppressor cells (MDSCs), and modulation of
immune checkpoint Immune checkpoints are regulators of the immune system. These pathways are crucial for self-tolerance, which prevents the immune system from attacking cells indiscriminately. However, some cancers can protect themselves from attack by stimulat ...
pathways. HT-29 cell response to pro-inflammatory
cytokines Cytokines () are a broad and loose category of small proteins (~5–25 kDa) important in cell signaling. Cytokines are produced by a broad range of cells, including immune cells like macrophages, B cell, B lymphocytes, T cell, T lymphocytes ...
and
chemokines Chemokines (), or chemotactic cytokines, are a family of small cytokines or signaling proteins secreted by cells that induce directional movement of leukocytes, as well as other cell types, including endothelial and epithelial cells. In addit ...
significantly contributes to tumor progression and immune escape, so they are instrumental in studying colorectal tumor inflammation. These insights have implications for the development of novel anti-inflammatory or immunomodulatory cancer therapies targeting colorectal tumors.


References

{{reflist


External links


Cellosaurus entry for HT-29
Human cell lines Colorectal cancer