Diarthonis
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''Diarthonis'' is a fungal
genus Genus (; : genera ) is a taxonomic rank above species and below family (taxonomy), family as used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In bino ...
in the family
Graphidaceae The Graphidaceae are a family of lichen-forming fungi in the order Graphidales. The family contains nearly a hundred genera and more than 2000 species. Although the family has a cosmopolitan distribution, most Graphidaceae species occur in tropic ...
. Originally created in 1909 but long unused, the genus was revived in 2020 to accommodate ''D. spadicea'' when
molecular A molecule is a group of two or more atoms that are held together by attractive forces known as chemical bonds; depending on context, the term may or may not include ions that satisfy this criterion. In quantum physics, organic chemistry, ...
studies showed this species fell outside the main ''
Arthonia ''Arthonia'' is a genus of lichens in the family Arthoniaceae. It was circumscribed by Swedish botanist Erik Acharius in 1806. It is a genus of thin crustose lichen of widely varying forms, commonly called comma lichens.Field Guide to California ...
'' clade. The species grows as a thin, greyish to greenish crust beneath tree bark, producing small black disc-like reproductive structures (
apothecia An ascocarp, or ascoma (: ascomata), is the fruiting body ( sporocarp) of an ascomycete phylum fungus. It consists of very tightly interwoven hyphae and millions of embedded asci, each of which typically contains four to eight ascospores. As ...
) that resemble drops of tar. It is considered an
indicator Indicator may refer to: Biology * Environmental indicator of environmental health (pressures, conditions and responses) * Ecological indicator of ecosystem health (ecological processes) * Health indicator, which is used to describe the health o ...
of ecological continuity in
old-growth An old-growth forest or primary forest is a forest that has developed over a long period of time without Disturbance (ecology), disturbance. Due to this, old-growth forests exhibit unique ecological features. The Food and Agriculture Organizati ...
broadleaved forests, particularly those dominated by
English oak ''Quercus robur'', the pedunculate oak, is a species of flowering plant in the beech and oak family, Fagaceae. It is a large tree, native to most of Europe and western Asia, and is widely cultivated in other temperate regions. It grows on soil ...
, and is listed as
near-threatened A near-threatened species is a species which has been categorized as "Near Threatened" (NT) by the International Union for Conservation of Nature (IUCN) as that may be vulnerable to endangerment in the near future, but it does not currently qu ...
in some regions.


Taxonomy

The genus ''Diarthonis'' was established by
Frederic Clements Frederic Edward Clements (September 16, 1874 – July 26, 1945) was an American plant ecologist and pioneer in the study of both plant ecology and vegetation succession. Biography Born in Lincoln, Nebraska, he studied botany at the University o ...
in 1909, with a minimal but nomenclaturally valid . The
type species In International_Code_of_Zoological_Nomenclature, zoological nomenclature, a type species (''species typica'') is the species name with which the name of a genus or subgenus is considered to be permanently taxonomically associated, i.e., the spe ...
, ''D. lurida'' (a
rejected name A conserved name or ''nomen conservandum'' (plural ''nomina conservanda'', abbreviated as ''nom. cons.'') is a scientific name that has specific nomenclatural protection. That is, the name is retained, even though it violates one or more rules wh ...
), was based on ''Arthonia lurida'' Ach. (1803). After its establishment, the genus name remained essentially unused for over a century. In 1981, ''D. lurida'' was formally rejected following a nomenclatural proposal by David Hawksworth and Martha Sherwood to protect the later name ''Arthonia spadicea'' Leight. (1854). The genus name ''Diarthonis'' itself remained available for use despite its type species being rejected. This became relevant when
phylogenetic In biology, phylogenetics () is the study of the evolutionary history of life using observable characteristics of organisms (or genes), which is known as phylogenetic inference. It infers the relationship among organisms based on empirical dat ...
studies by Frisch and colleagues (2014) demonstrated that ''Arthonia spadicea'' fell outside the main ''Arthonia''
clade In biology, a clade (), also known as a Monophyly, monophyletic group or natural group, is a group of organisms that is composed of a common ancestor and all of its descendants. Clades are the fundamental unit of cladistics, a modern approach t ...
, forming a
sister A sister is a woman or a girl who shares parents or a parent with another individual; a female sibling. The male counterpart is a brother. Although the term typically refers to a familial relationship, it is sometimes used endearingly to ref ...
group with the Arthoniaceae along with ''Arthothelium norvegicum''. This clade was later referred to as the "Coniangium clade" by Thiyagaraja and colleagues (2020), though this name was inappropriate as the type species of ''Coniangium'' (''C. vulgare'' Fr., a synonym of ''Arthonia vinosa'') belongs within the Arthoniaceae ''
sensu stricto ''Sensu'' is a Latin word meaning "in the sense of". It is used in a number of fields including biology, geology, linguistics, semiotics, and law. Commonly it refers to how strictly or loosely an expression is used in describing any particular c ...
''. While the generic name ''Diarthonis'' was established using a rejected name (''A. lurida'') as its type, the nomenclatural rules permits the use of generic names in such cases. This allowed for the formal transfer of ''A. spadicea'' to ''Diarthonis'' as ''D. spadicea'' (Leight.) Frisch, Ertz, Coppins & P.F. Cannon in 2020. DNA analysis has suggested that ''Arthothelium norvegicum'' may also belong in ''Diarthonis'', though further research is needed to confirm this relationship due to long phylogenetic branch lengths.


Description

''Diarthonis'' is characterised by its thin, greyish to grey-green body (
thallus Thallus (: thalli), from Latinized Greek (), meaning "a green shoot" or "twig", is the vegetative tissue of some organisms in diverse groups such as algae, fungi, some liverworts, lichens, and the Myxogastria. A thallus usually names the entir ...
) that typically grows beneath the surface of tree bark, though occasionally appears on the surface. Its most distinctive features are the small, rounded reproductive structures (
apothecia An ascocarp, or ascoma (: ascomata), is the fruiting body ( sporocarp) of an ascomycete phylum fungus. It consists of very tightly interwoven hyphae and millions of embedded asci, each of which typically contains four to eight ascospores. As ...
) that resemble drops of tar on the bark. These apothecia are reddish-brown to nearly black, often with a slight shine, and measure between 0.2 and 1.5 mm across. When viewed under a microscope, the apothecia show a uniform orange-brown colour that turns dull purple when treated with
potassium hydroxide Potassium hydroxide is an inorganic compound with the formula K OH, and is commonly called caustic potash. Along with sodium hydroxide (NaOH), KOH is a prototypical strong base. It has many industrial and niche applications, most of which utili ...
solution ( K). The
spore In biology, a spore is a unit of sexual reproduction, sexual (in fungi) or asexual reproduction that may be adapted for biological dispersal, dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores fo ...
s produced in these structures are colourless, divided into two cells by a single wall (
septum In biology, a septum (Latin language, Latin for ''something that encloses''; septa) is a wall, dividing a Body cavity, cavity or structure into smaller ones. A cavity or structure divided in this way may be referred to as septate. Examples Hum ...
), and roughly slipper-shaped, measuring 7–11 by 3–4 
μm The micrometre (Commonwealth English as used by the International Bureau of Weights and Measures; SI symbol: μm) or micrometer (American English), also commonly known by the non-SI term micron, is a unit of length in the International System ...
. The genus also produces smaller reproductive structures called
pycnidia A pycnidium (plural pycnidia) is an asexual fruiting body produced by mitosporic fungi, for instance in the order Sphaeropsidales ( Deuteromycota, Coelomycetes) or order Pleosporales (Ascomycota, Dothideomycetes). It is often spherical or inve ...
, which are brown with orange to reddish-brown walls that also turn pale purple with potassium hydroxide. These contain tiny, rod-shaped to narrowly elliptical spores (
conidia A conidium ( ; : conidia), sometimes termed an asexual chlamydospore or chlamydoconidium (: chlamydoconidia), is an asexual, non- motile spore of a fungus. The word ''conidium'' comes from the Ancient Greek word for dust, ('). They are also ...
). Chemical analysis has not detected any
lichen product Lichen products, also known as lichen substances, are organic compounds produced by a lichen. Specifically, they are secondary metabolites. Lichen products are represented in several different chemical classes, including terpenoids, orcinol deri ...
s in the species.


Habitat, distribution, and ecology

''Diarthonis spadicea'' is considered an indicator species of good habitat quality and ecological continuity in broadleaved woodlands dominated by ''
Quercus robur ''Quercus robur'', the pedunculate oak, is a species of flowering plant in the beech and oak family, Fagaceae. It is a large tree, native plant, native to most of Europe and western Asia, and is widely cultivated in other temperate regions. It ...
''. Some authors consider it an
old-growth An old-growth forest or primary forest is a forest that has developed over a long period of time without Disturbance (ecology), disturbance. Due to this, old-growth forests exhibit unique ecological features. The Food and Agriculture Organizati ...
indicator species. The species typically occurs in moist old forests that are well-lit but protected from direct sunlight. While it is often reported as being limited to the lowermost parts of tree boles or even roots, it has been found growing up to 2.5 metres high on trunks in some locations. In Italy, ''D. spadicea'' is listed as a
near-threatened species A near-threatened species is a species which has been categorized as "Near Threatened" (NT) by the International Union for Conservation of Nature (IUCN) as that may be vulnerable to endangerment in the near future, but it does not currently qu ...
in the national
Red List The International Union for Conservation of Nature (IUCN) Red List of Threatened Species, also known as the IUCN Red List or Red Data Book, founded in 1964, is an inventory of the global conservation status and extinction risk of biological sp ...
of lichens. In
Lombardy The Lombardy Region (; ) is an administrative regions of Italy, region of Italy that covers ; it is located in northern Italy and has a population of about 10 million people, constituting more than one-sixth of Italy's population. Lombardy is ...
, there was only a single historical record from the mid-19th century in the hills around
Como Como (, ; , or ; ) is a city and (municipality) in Lombardy, Italy. It is the administrative capital of the Province of Como. Nestled at the southwestern branch of the picturesque Lake Como, the city is a renowned tourist destination, ce ...
until recent surveys discovered new populations. In contrast, ''D. spadicea'' was listed as a
least-concern species A least-concern species is a species that has been evaluated and categorized by the International Union for Conservation of Nature (IUCN) as not being a focus of wildlife conservation because the specific species is still plentiful in the wil ...
in the first Red List of Latvian lichen in 2024.


References

{{Taxonbar , from1=Q108782359 , from2=Q10505244 , from3=Q107584913 , from4=Q107585271 , from5=Q108122308 Graphidaceae Graphidales genera Lichen genera Taxa described in 1909 Taxa named by Frederic Clements