Clorpt

Soil formation, also known as pedogenesis, is the process of soil genesis as regulated by the effects of place, environment, and history. Biogeochemical processes act to both create and destroy order (anisotropy) within soils. These alterations lead to the development of layers, termed soil horizons, distinguished by differences in color, structure, texture, and chemistry. These features occur in patterns of soil type distribution, forming in response to differences in soil forming factors.

Pedogenesis is studied as a branch of pedology, the study of soil in its natural environment. Other branches of pedology are the study of soil morphology and soil classification. The study of pedogenesis is important to understanding soil distribution patterns in current (soil geography) and past (paleopedology) geologic periods.

Overview

Soil develops through a series of changes. The starting point is weathering of freshly accumulated parent material. A variety of soil microbes (bacteria, archaea, fungi) feed on simple compounds (nutrients) released by weathering and produce organic acids and specialized proteins which contribute in turn to mineral weathering. They also leave behind organic residues which contribute to humus formation. Plant roots with their symbiotic mycorrhizal fungi are also able to extract nutrients from rocks.

New soils increase in depth by a combination of weathering and further deposition. The soil production rate due to weathering is approximately 1/10 mm per year. New soils can also deepen from dust deposition. Gradually soil is able to support higher forms of plants and animals, starting with pioneer species and proceeding along ecological succession to more complex plant and animal communities. Topsoils deepen with the accumulation of humus originating from dead remains of higher plants and soil microbes. They also deepen through mixing of organic matter with weathered minerals. As soils mature, they develop soil horizons as organic matter accumulates and mineral weathering and leaching take place.

Factors

Soil formation is influenced by at least five classic factors that are intertwined in the evolution of a soil. They are: parent material, climate, topography (relief), organisms, and time. When reordered to climate, organisms, relief, parent material, and time, they form the acronym CLORPT.

Parent material

The mineral material from which a soil forms is called parent material. Rock, whether its origin is igneous, sedimentary, or metamorphic, is the source of all soil mineral materials and the origin of all plant nutrients with the exceptions of nitrogen, hydrogen and carbon. As the parent rock is chemically and physically weathered, transported, deposited and precipitated, it is transformed into a soil.

Typical soil parent mineral materials are:
* Quartz: SiO₂
* Calcite: CaCO₃
* Feldspar: KAlSi₃O₈
* Mica (biotite):

Parent materials are classified according to how they came to be deposited. Residual materials are mineral materials that have weathered in place from primary bedrock. Transported materials are those that have been deposited by water, wind, ice or gravity. Cumulose material is organic matter that has grown and accumulates in place.

Residual soils are soils that develop from their underlying parent rocks and have the same general chemistry as those rocks. The soils found on mesas, plateaux, and plains are residual soils. In the United States as little as three percent of the soils are residual.

Most soils derive from transported materials that have been moved many miles by wind, water, ice and gravity:
* Aeolian processes (movement by wind) are capable of moving silt and fine sand many hundreds of miles, forming loess soils (60–90 percent silt), common in the Midwestern United States and Canada, north-western Europe, Argentina and Central Asia. Clay is seldom moved by wind as it forms stable aggregates.
* Water-transported materials are classed as either alluvial, lacustrine, or marine. Alluvial materials are those moved and deposited by flowing water. Sedimentary deposits settled in lakes are called lacustrine. Lake Bonneville and many soils around the Great Lakes are examples. Marine deposits, such as soils along the Atlantic and Gulf Coasts and in the Imperial Valley of California are the beds of ancient seas that have been revealed as the land uplifted.
* Ice moves parent material and makes deposits in the form of terminal and lateral moraines in the case of stationary glaciers. Retreating glaciers leave smoother ground moraines, and in all cases outwash plains are left as alluvial deposits are moved downstream from the glacier.
* Parent material moved by gravity is obvious at the base of steep slopes as talus cones and is called colluvial material.

Cumulose parent material is not moved but originates from deposited organic material. This includes peat and muck soils and results from preservation of plant residues by the low oxygen content of a high water table. While peat may form sterile soils, muck soils may be very fertile.

Weathering

The weathering of parent material takes the form of physical weathering (disintegration), chemical weathering (decomposition) and chemical transformation. Weathering is usually confined to the top few meters of geologic material, because physical, chemical, and biological stresses and fluctuations generally decrease with depth. Physical disintegration begins as rocks that have solidified deep in the Earth are exposed to lower pressure near the surface and swell and become mechanically unstable. Chemical decomposition is a function of mineral solubility, the rate of which doubles with each 10 °C rise in temperature but is strongly dependent on water to effect chemical changes. Rocks that will decompose in a few years in tropical climates will remain unaltered for millennia in deserts. Structural changes are the result of hydration, oxidation, and reduction. Chemical weathering mainly results from the excretion of organic acids and chelating compounds by bacteria and fungi, thought to increase under greenhouse effect.
* ''Physical disintegration'' is the first stage in the transformation of parent material into soil. Temperature fluctuations cause expansion and contraction of the rock, splitting it along lines of weakness. Water may then enter the cracks and freeze and cause the physical splitting of material along a path toward the center of the rock, while temperature gradients within the rock can cause exfoliation of "shells". Cycles of wetting and drying cause soil particles to be abraded to a finer size, as does the physical rubbing of material as it is moved by wind, water, and gravity. Organisms may reduce parent material size and create crevices and pores through the mechanical action of plant roots and the digging activity of animals.
* ''Chemical decomposition'' and ''structural changes'' result when minerals are made soluble by water or are changed in structure. The first three of the following list are solubility changes, and the last three are structural changes.

# The ''solution'' of salts in water results from the action of bipolar water molecules on ionic salt compounds producing a solution of ions and water, removing those minerals and reducing the rock's integrity, at a rate depending on water flow and pore channels.
# ''Hydrolysis'' is the transformation of minerals into polar molecules by the splitting of intervening water. This results in soluble acid-base pairs. For example, the hydrolysis of orthoclase-feldspar transforms it to acid silicate clay and basic potassium hydroxide, both of which are more soluble.
# In ''carbonation'', the solution of carbon dioxide in water forms carbonic acid. Carbonic acid will transform calcite into more soluble calcium bicarbonate.
# ''Hydration'' is the inclusion of water in a mineral structure, causing it to swell and leaving it stressed and easily decomposed.
# ''Oxidation'' of a mineral compound is the inclusion of oxygen in a mineral, causing it to increase its oxidation number and swell due to the relatively large size of oxygen, leaving it stressed and more easily attacked by water (hydrolysis) or carbonic acid (carbonation).
# '' Reduction'', the opposite of oxidation, means the removal of oxygen, hence the oxidation number of some part of the mineral is reduced, which occurs when oxygen is scarce. The reduction of minerals leaves them electrically unstable, more soluble and internally stressed and easily decomposed. It mainly occurs in waterlogged conditions.

Of the above, hydrolysis and carbonation are the most effective, in particular in regions of high rainfall, temperature and physical erosion. Chemical weathering becomes more effective as the surface area of the rock increases, thus is favoured by physical disintegration. This stems in latitudinal and altitudinal climate gradients in regolith formation.

Saprolite is a particular example of a residual soil formed from the transformation of granite, metamorphic and other types of bedrock into clay minerals. Often called weathered granite, saprolite is the result of weathering processes that include: hydrolysis, chelation from organic compounds, hydration and physical processes that include freezing and thawing. The mineralogical and chemical composition of the primary bedrock material, its physical features (including grain size and degree of consolidation), and the rate and type of weathering transforms the parent material into a different mineral. The texture, pH and mineral constituents of saprolite are inherited from its parent material. This process is also called ''arenization'', resulting in the formation of sandy soils, thanks to the much higher resistance of quartz compared to other mineral components of granite (e.g., mica, amphibole, feldspar).

Climate

The principal climatic variables influencing soil formation are effective precipitation (i.e., precipitation minus evapotranspiration) and temperature, both of which affect the rates of chemical, physical, and biological processes. Temperature and moisture both influence the organic matter content of soil through their effects on the balance between primary production and decomposition: the colder or drier the climate the lesser atmospheric carbon is fixed as organic matter while the lesser organic matter is decomposed. Climate also indirectly influences soil formation through the effects of vegetation cover and biological activity, which modify the rates of chemical reactions in the soil.

Climate is the dominant factor in soil formation, and soils show the distinctive characteristics of the climate zones in which they form, with a feedback to climate through transfer of carbon stocked in soil horizons back to the atmosphere. If warm temperatures and abundant water are present in the profile at the same time, the processes of weathering, leaching, and plant growth will be maximized. According to the climatic determination of biomes, humid climates favor the growth of trees. In contrast, grasses are the dominant native vegetation in subhumid and semiarid regions, while shrubs and brush of various kinds dominate in arid areas.

Water is essential for all the major chemical weathering reactions. To be effective in soil formation, water must penetrate the regolith. The seasonal rainfall distribution, evaporative losses, site topography, and soil permeability interact to determine how effectively precipitation can influence soil formation. The greater the depth of water penetration, the greater the depth of weathering of the soil and its development. Surplus water percolating through the soil profile transports soluble and suspended materials from the upper layers (eluviation) to the lower layers (illuviation), including clay particles and dissolved organic matter. It may also carry away soluble materials in the surface drainage waters. Thus, percolating water stimulates weathering reactions and helps differentiate soil horizons.

Likewise, a deficiency of water is a major factor in determining the characteristics of soils of dry regions. Soluble salts are not leached from these soils, and in some cases they build up to levels that curtail plant and microbial growth. Soil profiles in arid and semi-arid regions are also apt to accumulate carbonates and certain types of expansive clays (calcrete or caliche horizons). In tropical soils, when the soil has been deprived of vegetation (e.g. by deforestation) and thereby is submitted to intense evaporation, the upward capillary movement of water, which has dissolved iron and aluminum salts, is responsible for the formation of a superficial hard pan of laterite or bauxite, respectively, which is improper for cultivation, a known case of irreversible soil degradation.

The direct influences of climate include:
* A shallow accumulation of lime in low rainfall areas as caliche
* Formation of acid soils in humid areas
* Erosion of soils on steep hillsides
* Deposition of eroded materials downstream
* Very intense chemical weathering, leaching, and erosion in warm and humid regions where soil does not freeze

Climate directly affects the rate of weathering and leaching. Wind moves sand and smaller particles (dust), especially in arid regions where there is little plant cover, depositing it close to or far from the entrainment source. The type and amount of precipitation influence soil formation by affecting the movement of ions and particles through the soil, and aid in the development of different soil profiles. Soil profiles are more distinct in wet and cool climates, where organic materials may accumulate, than in wet and warm climates, where organic materials are rapidly consumed. The effectiveness of water in weathering parent rock material depends on seasonal and daily temperature fluctuations, which favour tensile stresses in rock minerals, and thus their mechanical disaggregation, a process called thermal fatigue. By the same process freeze-thaw cycles are an effective mechanism which breaks up rocks and other consolidated materials.

Topography

The topography, or relief, is characterized by the inclination (slope), elevation, and orientation of the terrain ( aspect). Topography determines the rate of precipitation or runoff and the rate of formation or erosion of the surface soil profile. The topographical setting may either hasten or retard the work of climatic forces.

Steep slopes encourage rapid soil loss by erosion and allow less rainfall to enter the soil before running off and hence, little mineral deposition in lower profiles (illuviation). In semiarid regions, the lower effective rainfall on steeper slopes also results in less complete vegetative cover, so there is less plant contribution to soil formation. For all of these reasons, steep slopes prevent the formation of soil from getting very far ahead of soil destruction. Therefore, soils on steep terrain tend to have rather shallow, poorly developed profiles in comparison to soils on nearby, more level sites.

Topography determines exposure to weather, fire, and other forces of man and nature. Mineral accumulations, plant nutrients, type of vegetation, vegetation growth, erosion, and water drainage are dependent on topographic relief. Soils at the bottom of a hill will get more water than soils on the slopes, and soils on the slopes that face the sun's path will be drier than soils on slopes that do not.

In swales and depressions where runoff water tends to concentrate, the regolith is usually more deeply weathered, and soil profile development is more advanced. However, in the lowest landscape positions, water may saturate the regolith to such a degree that drainage and aeration are restricted. Here, the weathering of some minerals and the decomposition of organic matter are retarded, while the loss of iron and manganese is accelerated. In such low-lying topography, special profile features characteristic of wetland soils may develop. Depressions allow the accumulation of water, minerals and organic matter, and in the extreme, the resulting soils will be saline marshes or peat bogs.

Recurring patterns of topography result in toposequences or soil catenas. These patterns emerge from topographic differences in erosion, deposition, fertility, soil moisture, plant cover, soil biology, fire history, and exposure to the elements. Gravity transports water downslope, together with mineral and organic solutes and colloids, increasing particulate and base content at the foot of hills and mountains. However, many other factors like drainage and erosion interact with slope position, blurring its expected influence on crop yield.

Organisms

Each soil has a unique combination of microbial, plant, animal and human influences acting upon it. Microorganisms are particularly influential in the mineral transformations critical to the soil forming process. Additionally, some bacteria can fix atmospheric nitrogen, and some fungi are efficient at extracting deep soil phosphorus and increasing soil carbon levels in the form of glomalin. Plants hold soil against erosion, and accumulated plant material build soil humus levels. Plant root exudation supports microbial activity. Animals serve to decompose plant materials and mix soil through bioturbation.

Soil is the most speciose (species-rich) ecosystem on Earth, but the vast majority of organisms in soil are microbes, a great many of which have not been described. There may be a microbial population limit of around one billion cells per gram of soil, but estimates of the number of species vary widely from 50,000 per gram to over a million per gram of soil. The number of organisms and species can vary widely according to soil type, location, and depth.

Plants, animals, fungi, bacteria and humans affect soil formation (see soil biomantle and stonelayer). Soil animals, including soil macrofauna (e.g. earthworms, termites, tenebrionids, gophers, moles) and soil mesofauna (e.g. enchytraeids, springtails, mites), mix soils as they form burrows and pores, allowing moisture and gases to move about, a process called bioturbation. In the same way, plant roots penetrate soil horizons and open channels upon decomposition. Plants with deep taproots can penetrate many metres through the different soil layers to bring up nutrients from deeper in the profile. Plants have fine roots that excrete organic compounds (sugars, organic acids, mucilage), slough off cells (in particular at their tip), and are easily decomposed, adding organic matter to soil, a process called ''rhizodeposition''.

Microorganisms, including fungi and bacteria, effect chemical exchanges between roots and soil and act as a reserve of nutrients in a soil biological hotspot called rhizosphere. The growth of roots through the soil stimulates microbial populations, stimulating in turn the activity of their predators (notably amoeba), thereby increasing the mineralization rate, and in last turn root growth, a positive feedback called the soil microbial loop. Out of root influence, in the bulk soil most bacteria are in a quiescent stage, forming micro- aggregates, i.e. mucilaginous colonies to which clay particles are glued, offering them a protection against desiccation and predation by soil microfauna

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