The ''Caliciviridae'' are a family of "small round structured"
viruses
A virus is a submicroscopic infectious agent that replicates only inside the living cells of an organism. Viruses infect all life forms, from animals and plants to microorganisms, including bacteria and archaea. Viruses are found in almo ...
, members of Class IV of the
Baltimore scheme. Caliciviridae bear resemblance to enlarged picornavirus and was formerly a separate genus within the picornaviridae. They are
positive-sense, single-stranded
RNA
Ribonucleic acid (RNA) is a polymeric molecule that is essential for most biological functions, either by performing the function itself (non-coding RNA) or by forming a template for the production of proteins (messenger RNA). RNA and deoxyrib ...
which is not segmented. Thirteen species are placed in this family, divided among eleven genera.
Diseases associated with this family include feline calicivirus (respiratory disease), rabbit hemorrhagic disease virus (often fatal hepatitis), and Norwalk group of viruses (gastroenteritis).
Caliciviruses naturally infect vertebrate
Vertebrates () are animals with a vertebral column (backbone or spine), and a cranium, or skull. The vertebral column surrounds and protects the spinal cord, while the cranium protects the brain.
The vertebrates make up the subphylum Vertebra ...
s, and have been found in a number of organisms such as humans
Humans (''Homo sapiens'') or modern humans are the most common and widespread species of primate, and the last surviving species of the genus ''Homo''. They are Hominidae, great apes characterized by their Prehistory of nakedness and clothing ...
, cattle
Cattle (''Bos taurus'') are large, domesticated, bovid ungulates widely kept as livestock. They are prominent modern members of the subfamily Bovinae and the most widespread species of the genus '' Bos''. Mature female cattle are calle ...
, pigs, cats
The cat (''Felis catus''), also referred to as the domestic cat or house cat, is a small domesticated carnivorous mammal. It is the only domesticated species of the family Felidae. Advances in archaeology and genetics have shown that the ...
, chicken
The chicken (''Gallus gallus domesticus'') is a domesticated subspecies of the red junglefowl (''Gallus gallus''), originally native to Southeast Asia. It was first domesticated around 8,000 years ago and is now one of the most common and w ...
s, reptile
Reptiles, as commonly defined, are a group of tetrapods with an ectothermic metabolism and Amniotic egg, amniotic development. Living traditional reptiles comprise four Order (biology), orders: Testudines, Crocodilia, Squamata, and Rhynchocepha ...
s, dolphin
A dolphin is an aquatic mammal in the cetacean clade Odontoceti (toothed whale). Dolphins belong to the families Delphinidae (the oceanic dolphins), Platanistidae (the Indian river dolphins), Iniidae (the New World river dolphins), Pontopori ...
s and amphibian
Amphibians are ectothermic, anamniote, anamniotic, tetrapod, four-limbed vertebrate animals that constitute the class (biology), class Amphibia. In its broadest sense, it is a paraphyletic group encompassing all Tetrapod, tetrapods, but excl ...
s. The caliciviruses have a simple construction and are not enveloped. The capsid
A capsid is the protein shell of a virus, enclosing its genetic material. It consists of several oligomeric (repeating) structural subunits made of protein called protomers. The observable 3-dimensional morphological subunits, which may or m ...
appears hexagonal
In geometry, a hexagon (from Greek , , meaning "six", and , , meaning "corner, angle") is a six-sided polygon. The total of the internal angles of any simple (non-self-intersecting) hexagon is 720°.
Regular hexagon
A regular hexagon is d ...
/ spherical and has icosahedral symmetry (T=1 or T=3) with a diameter of 35–39 nm.
Caliciviruses are not very well studied because until 2010, they could not be grown in culture
Culture ( ) is a concept that encompasses the social behavior, institutions, and Social norm, norms found in human societies, as well as the knowledge, beliefs, arts, laws, Social norm, customs, capabilities, Attitude (psychology), attitudes ...
, and they have a very narrow host range and no suitable animal model. However, the application of modern genomic technologies has led to an increased understanding of the virus family. A 2013 isolate from rhesus monkey
The rhesus macaque (''Macaca mulatta''), colloquially rhesus monkey, is a species of Old World monkey. There are between six and nine recognised subspecies split between two groups, the Chinese-derived and the Indian-derived. Generally brown or g ...
s—Tulane virus
Tulane virus (''Recovirus tulani'') is a calicivirus isolated from the rhesus monkey
The rhesus macaque (''Macaca mulatta''), colloquially rhesus monkey, is a species of Old World monkey. There are between six and nine recognised subspecies s ...
—can be grown in culture, and this system promises to increase understanding of these viruses.[Yu G, Zhang D, Guo F, Tan M, Jiang X, Jiang W (2013). "Cryo-EM structure of a novel calicivirus, Tulane Virus". ''PLoS One'' 8(3):e59817. ]
Etymology
Calici- comes from the Latin word ''Calyx'' and the Greek word ''kalyx''. The words mean a cup or chalice, a Calix. This comes from the strains having visible cup-shaped depressions.
Taxonomy
The following genera are recognized:
* '' Bavovirus''
* ''Lagovirus
''Lagovirus'' is a genus of viruses, in the family ''Caliciviridae''. Lagomorphs serve as natural hosts. There are two species in this genus. Diseases associated with this genus include: necrotizing hepatitis leading to fatal hemorrhages.
Taxono ...
''
* '' Minovirus''
* '' Nacovirus''
* ''Nebovirus
''Nebovirus'' is a genus of viruses, in the family ''Caliciviridae
The ''Caliciviridae'' are a family of "small round structured" viruses, members of Class IV of the Baltimore scheme. Caliciviridae bear resemblance to enlarged picornavirus ...
''
* ''Norovirus
Norovirus, also known as Norwalk virus and sometimes referred to as the winter vomiting disease, is the most common cause of gastroenteritis. Infection is characterized by non-bloody diarrhea, vomiting, and stomach pain. Fever or headaches may ...
''
* '' Recovirus''
* '' Salovirus''
* ''Sapovirus
Sapovirus is a genetically diverse genus of single-stranded Positive sense RNA, positive-sense RNA, non-enveloped viruses within the family ''Caliciviridae''. Together with norovirus, sapoviruses are the most common cause of acute gastroenteriti ...
''
* '' Valovirus''
* ''Vesivirus
''Vesivirus'' is a genus of viruses, in the family ''Caliciviridae''. Swine, sea mammals, and felines serve as natural hosts. There are two species in this genus. Diseases associated with this genus include: respiratory disease, Feline calicivir ...
''
A number of other caliciviruses remain unclassified, including the chicken calicivirus.
Virology
Life cycle
Viral replication is cytoplasmic. Entry into the host cell is achieved by attachment to host receptors, which mediate endocytosis. Replication follows the positive-stranded RNA virus replication model. Positive-stranded RNA virus transcription is the method of transcription. Translation takes place by leaky scanning, and RNA termination-reinitiation. Vertebrates serve as the natural host. Transmission routes are fecal-oral.
Human disease
History
Establishing the viral etiology took many decades due to the difficulty of growing the virus in cell culture. In the 1940s and 1950s in the United States and Japan, caliciviridae could not be grown in culture, but as an experiment bacterial free filtrate of diarrhea was given to volunteers to check if viruses were present in volunteers' stool. These experiments demonstrated that nonbacterial, filterable agents had the capability of causing enteric disease in humans. In 1968, an outbreak at a Norwalk elementary school (e.g. Norwalk virus) in Ohio led to stool samples again being given to volunteers and serially passaged to other people. Finally, in 1972, Kapikian and his colleagues isolated the Norwalk virus from volunteers using immune electron microscopy, a process that involves looking directly at antibody-antigen complexes. The classification of this one Norwalk virus strain served as the prototype for other species and small round structured viruses later known as Norovirus
Norovirus, also known as Norwalk virus and sometimes referred to as the winter vomiting disease, is the most common cause of gastroenteritis. Infection is characterized by non-bloody diarrhea, vomiting, and stomach pain. Fever or headaches may ...
.
Animal viruses
Rabbit hemorrhagic disease virus is a pathogen of rabbits that causes major problems throughout the world where rabbits are reared for food and clothing, make a significant contribution to ecosystem ecology
Ecosystem ecology is the integrated study of living ( biotic) and non-living ( abiotic) components of ecosystems and their interactions within an ecosystem framework. This science examines how ecosystems work and relates this to their components ...
, and where they support valued wildlife as a food source.
Uses
Australia
Australia, officially the Commonwealth of Australia, is a country comprising mainland Australia, the mainland of the Australia (continent), Australian continent, the island of Tasmania and list of islands of Australia, numerous smaller isl ...
and New Zealand
New Zealand () is an island country in the southwestern Pacific Ocean. It consists of two main landmasses—the North Island () and the South Island ()—and List of islands of New Zealand, over 600 smaller islands. It is the List of isla ...
, in an effort to control their rabbit populations, have intentionally spread rabbit calicivirus.
References
External links
ICTV Report: ''Caliciviridae''
description page from the International Committee on Taxonomy of Viruses
The International Committee on Taxonomy of Viruses (ICTV) authorizes and organizes the taxonomic classification of and the nomenclature for viruses. The ICTV develops a universal taxonomic scheme for viruses, and thus has the means to appropri ...
site
MicrobiologyBytes: Caliciviruses
Virus Pathogen Database and Analysis Resource (ViPR): Caliciviridae
3D macromolecular structures of Caliciviridae from the EM Data Bank(EMDB)
ICTV
{{Taxonbar, from=Q1026758
Riboviria
Virus families