CIDNP
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CIDNP (chemically induced dynamic nuclear polarization), often pronounced like "kidnip", is a
nuclear magnetic resonance Nuclear magnetic resonance (NMR) is a physical phenomenon in which nuclei in a strong constant magnetic field are disturbed by a weak oscillating magnetic field (in the near field) and respond by producing an electromagnetic signal with a ...
(NMR) technique that is used to study chemical reactions that involve
radical Radical (from Latin: ', root) may refer to: Politics and ideology Politics *Classical radicalism, the Radical Movement that began in late 18th century Britain and spread to continental Europe and Latin America in the 19th century *Radical politics ...
s. It detects the non-Boltzmann (non-thermal)
nuclear spin Nuclear may refer to: Physics Relating to the nucleus of the atom: * Nuclear engineering * Nuclear physics * Nuclear power * Nuclear reactor * Nuclear weapon * Nuclear medicine *Radiation therapy *Nuclear warfare Mathematics * Nuclear space * ...
state distribution produced in these reactions as enhanced absorption or emission signals. CIDNP was discovered in 1967 by Bargon and Fischer, and, independently, by Ward and Lawler. Early theories were based on dynamic nuclear polarisation (hence the name) using the Overhauser effect. The subsequent experiments, however, have found that in many cases DNP fails to explain CIDNP polarization phase. In 1969 an alternative explanation which relies on the nuclear spins affecting the probability of a radical pair recombining or separating. It is related to chemically induced dynamic electron polarization (CIDEP) insofar as the radical-pair mechanism explains both phenomena.


Concept and experimental set-up

The effect is detected by
NMR spectroscopy Nuclear magnetic resonance spectroscopy, most commonly known as NMR spectroscopy or magnetic resonance spectroscopy (MRS), is a spectroscopic technique based on re-orientation of atomic nuclei with non-zero nuclear spins in an external magnetic f ...
, usually using 1H NMR spectrum, as enhanced
absorption Absorption may refer to: Chemistry and biology *Absorption (biology), digestion **Absorption (small intestine) *Absorption (chemistry), diffusion of particles of gas or liquid into liquid or solid materials *Absorption (skin), a route by which su ...
or
emission Emission may refer to: Chemical products * Emission of air pollutants, notably: ** Flue gas, gas exiting to the atmosphere via a flue ** Exhaust gas, flue gas generated by fuel combustion ** Emission of greenhouse gases, which absorb and emit rad ...
signals ("negative peaks"). The effect arises when unpaired
electrons The electron (, or in nuclear reactions) is a subatomic particle with a negative one elementary charge, elementary electric charge. It is a fundamental particle that comprises the ordinary matter that makes up the universe, along with up qua ...
(radicals) are generated during a chemical reaction involving heat or light within the
NMR tube An NMR tube is a thin glass walled tube used to contain samples in nuclear magnetic resonance spectroscopy. Typically NMR tubes come in 5 mm diameters but 10 mm and 3 mm samples are known. It is important that the tubes are uniforml ...
. The magnetic field in the
spectrometer A spectrometer () is a scientific instrument used to separate and measure Spectrum, spectral components of a physical phenomenon. Spectrometer is a broad term often used to describe instruments that measure a continuous variable of a phenomeno ...
interacts with the magnetic fields that are caused by the spins of the protons. The two spins of protons produce two slightly different energy levels. In normal conditions, slightly more nuclei, about 10 parts in a million are found in the lower energy level. In contrast, CIDNP produces greatly imbalanced populations, with far greater numbers of spins in upper energy level in some products of the reaction and greater numbers in the lower energy level in other products. The spectrometer uses
radio frequencies Radio frequency (RF) is the oscillation rate of an alternating electric current or voltage or of a magnetic, electric or electromagnetic field or mechanical system in the frequency range from around to around . This is roughly between the upper ...
to detect these differences.


Radical pair mechanism

The radical pair mechanism is currently accepted as the most common cause of CIDNP. This theory was proposed by Closs, and, independently, by Kaptein and Oosterhoff. There are, however, exceptions, and the DNP mechanism was found to be operational, for example, in many fluorine-containing radicals. The chemical bond is a pair of electrons with opposite spins.
Photochemical reactions Organic photochemistry encompasses organic reactions that are induced by the action of light. The absorption of ultraviolet light by organic molecules often leads to reactions. In the earliest days, sunlight was employed, while in more modern times ...
or heat can cause an electron in the bond to change its spin. The electrons are now unpaired, in what is known as a triplet state, and the bond is broken. The orientation of some of the nuclear spins will favour some unpaired electrons changing their spins and so revert to the normal pairs as chemical bonds. This quantum interaction is known as spin–orbit coupling. Other nuclear spins will exert a different influence on the triplet pairs, giving the radical pairs more time to separate and react with other molecules. Consequently, the products of recombination will have different distributions of nuclear spins from the products produced by separated radicals.


Typical photochemical reaction

The generation of CIDNP in a typical photochemical system (target +
photosensitizer Photosensitizers are light absorbers that alter the course of a photochemical reaction. They usually are catalysts. They can function by many mechanisms; sometimes they abstract an electron from the substrate, and sometimes they abstract a hydro ...
, flavin in this example) is a cyclic
photochemical Photochemistry is the branch of chemistry concerned with the chemical effects of light. Generally, this term is used to describe a chemical reaction caused by absorption of ultraviolet (wavelength from 100 to 400  nm), visible (400–750&nb ...
process shown schematically in Figure 1. The chain of reactions is initiated by a blue light
photon A photon () is an elementary particle that is a quantum of the electromagnetic field, including electromagnetic radiation such as light and radio waves, and the force carrier for the electromagnetic force. Photons are massless particles that can ...
, which excites the
flavin mononucleotide Flavin mononucleotide (FMN), or riboflavin-5′-phosphate, is a biomolecule produced from riboflavin (vitamin B2) by the enzyme riboflavin kinase and functions as the prosthetic group of various oxidoreductases, including NADH dehydrogenase, as ...
(FMN) photosensitizer to the singlet excited state. The
fluorescence Fluorescence is one of two kinds of photoluminescence, the emission of light by a substance that has absorbed light or other electromagnetic radiation. When exposed to ultraviolet radiation, many substances will glow (fluoresce) with colore ...
quantum yield In particle physics, the quantum yield (denoted ) of a radiation-induced process is the number of times a specific event occurs per photon absorbed by the system. \Phi(\lambda)=\frac Applications Fluorescence spectroscopy The fluorescence ...
of this state is rather low, and approximately half of the molecules undergo
intersystem crossing Intersystem crossing (ISC) is an isoenergetic radiationless process involving a transition between the two electronic states with different spin multiplicity. Excited singlet and triplet states When an electron in a molecule with a singlet grou ...
into the long-lived
triplet state In quantum mechanics, a triplet state, or spin triplet, is the quantum state of an object such as an electron, atom, or molecule, having a quantum spin ''S'' = 1. It has three allowed values of the spin's projection along a given axis ''m''S = ...
. Triplet FMN has a remarkable
electron affinity The electron affinity (''E''ea) of an atom or molecule is defined as the amount of energy released when an electron attaches to a neutral atom or molecule in the gaseous state to form an anion. ::X(g) + e− → X−(g) + energy This differs by si ...
. If a molecule with a low
ionization potential In physics and chemistry, ionization energy (IE) is the minimum energy required to remove the most loosely bound electron of an isolated gaseous atom, positive ion, or molecule. The first ionization energy is quantitatively expressed as :X(g) ...
(e.g.
phenol Phenol (also known as carbolic acid, phenolic acid, or benzenol) is an aromatic organic compound with the molecular formula . It is a white crystalline solid that is volatile and can catch fire. The molecule consists of a phenyl group () ...
s, polyaromatics) is present in the system, the diffusion-limited
electron transfer reaction Electron transfer (ET) occurs when an electron relocates from an atom, ion, or molecule, to another such chemical entity. ET describes the mechanism by which electrons are transferred in redox reactions. Electrochemical processes are ET reaction ...
forms a spin-correlated triplet electron transfer state – a radical pair. The
kinetics Kinetics (, ''movement'' or ''to move'') may refer to: Science and medicine * Kinetics (physics), the study of motion and its causes ** Rigid body kinetics, the study of the motion of rigid bodies * Chemical kinetics, the study of chemical ...
are complicated and may involve multiple protonations and
deprotonation Deprotonation (or dehydronation) is the removal (transfer) of a proton (or hydron, or hydrogen cation), (H+) from a Brønsted–Lowry acid in an acid–base reaction.Henry Jakubowski, Biochemistry Online Chapter 2A3, https://employees.csbsju.ed ...
s, and hence exhibit pH dependence. The radical pair may either cross over to a singlet electron state and then recombine, or separate and perish in side reactions. The relative probability of these two pathways for a given radical pair depends on the nuclear spin state and leads to the nuclear spin state sorting and observable nuclear
polarization Polarization or polarisation may refer to: Mathematics *Polarization of an Abelian variety, in the mathematics of complex manifolds *Polarization of an algebraic form, a technique for expressing a homogeneous polynomial in a simpler fashion by ...
.


Applications

Detected as enhanced absorptive or emissive signals in the
NMR Nuclear magnetic resonance (NMR) is a physical phenomenon in which atomic nucleus, nuclei in a strong constant magnetic field are disturbed by a weak oscillating magnetic field (in the near and far field, near field) and respond by producing ...
spectra of the reaction products, CIDNP has been exploited for the last 30 years to characterise transient free radicals and their
reaction mechanism In chemistry, a reaction mechanism is the step by step sequence of elementary reactions by which overall chemical reaction occurs. A chemical mechanism is a theoretical conjecture that tries to describe in detail what takes place at each stage ...
s. In certain cases, CIDNP also offers the possibility of large improvements in
NMR Nuclear magnetic resonance (NMR) is a physical phenomenon in which atomic nucleus, nuclei in a strong constant magnetic field are disturbed by a weak oscillating magnetic field (in the near and far field, near field) and respond by producing ...
sensitivity. The principal application of this photo-CIDNP technique, as devised by Kaptein in 1978, has been to
protein Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residue (biochemistry), residues. Proteins perform a vast array of functions within organisms, including Enzyme catalysis, catalysing metab ...
s in which the aromatic amino acid residues
histidine Histidine (symbol His or H) is an essential amino acid that is used in the biosynthesis of proteins. It contains an Amine, α-amino group (which is in the protonated –NH3+ form under Physiological condition, biological conditions), a carboxylic ...
,
tryptophan Tryptophan (symbol Trp or W) is an α-amino acid that is used in the biosynthesis of proteins. Tryptophan contains an α-amino group, an α-carboxylic acid group, and a side chain indole, making it a polar molecule with a non-polar aromat ...
and
tyrosine -Tyrosine or tyrosine (symbol Tyr or Y) or 4-hydroxyphenylalanine is one of the 20 standard amino acids that are used by cells to synthesize proteins. It is a conditionally essential amino acid with a polar side group. The word "tyrosine" is ...
can be polarized using
flavins Flavins (from Latin ''flavus'', "yellow") refers generally to the class of organic compounds containing the tricyclic heterocycle isoalloxazine or its isomer alloxazine, and derivatives thereof. The biochemical source of flavin is the yellow B ...
or other
aza- The prefix aza- is used in organic chemistry to form names of organic compounds where a carbon atom is replaced by a nitrogen atom. The related term "deaza-" refers to when a nitrogen is removed and, usually, a carbon atom is put in its place. Som ...
aromatics as photosensitisers. The key feature of the method is that only
solvent A solvent (from the Latin language, Latin ''wikt:solvo#Latin, solvō'', "loosen, untie, solve") is a substance that dissolves a solute, resulting in a Solution (chemistry), solution. A solvent is usually a liquid but can also be a solid, a gas ...
accessible
histidine Histidine (symbol His or H) is an essential amino acid that is used in the biosynthesis of proteins. It contains an Amine, α-amino group (which is in the protonated –NH3+ form under Physiological condition, biological conditions), a carboxylic ...
,
tryptophan Tryptophan (symbol Trp or W) is an α-amino acid that is used in the biosynthesis of proteins. Tryptophan contains an α-amino group, an α-carboxylic acid group, and a side chain indole, making it a polar molecule with a non-polar aromat ...
and
tyrosine -Tyrosine or tyrosine (symbol Tyr or Y) or 4-hydroxyphenylalanine is one of the 20 standard amino acids that are used by cells to synthesize proteins. It is a conditionally essential amino acid with a polar side group. The word "tyrosine" is ...
residues can undergo the radical pair reactions that result in nuclear polarization. Photo-CIDNP has thus been used to probe the surface structure of
protein Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residue (biochemistry), residues. Proteins perform a vast array of functions within organisms, including Enzyme catalysis, catalysing metab ...
s, both in native and partially folded states, and their interactions with molecules that modify the accessibility of the reactive side chains. Although usually observed in liquids, the photo-CIDNP effect has also been detected in solid state, for example on 13C and 15N nuclei in photosynthetic reaction centres, where significant nuclear polarization can accumulate as a result of spin selection processes in the electron transfer reactions.


See also

*
Dynamic nuclear polarisation Dynamic nuclear polarization (DNP) is one of several Hyperpolarization (physics), hyperpolarization methods developed to enhance the sensitivity of nuclear magnetic resonance (NMR) spectroscopy. While an essential analytical tool with application ...
*
Electron paramagnetic resonance Electron paramagnetic resonance (EPR) or electron spin resonance (ESR) spectroscopy is a method for studying materials that have unpaired electrons. The basic concepts of EPR are analogous to those of nuclear magnetic resonance (NMR), but the spin ...
*
Magnetoreception Magnetoreception is a sense which allows an organism to detect the Earth's magnetic field. Animals with this sense include some arthropods, molluscs, and vertebrates (fish, amphibians, reptiles, birds, and mammals). The sense is mainly used ...
– a sense in birds that appears to rely on a radical pair mechanism


References


Further reading

# # # # # # # {{Authority control Physical chemistry Nuclear magnetic resonance