Bacillus Pumilus
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''Bacillus pumilus'' is a
Gram-positive In bacteriology, gram-positive bacteria are bacteria that give a positive result in the Gram stain test, which is traditionally used to quickly classify bacteria into two broad categories according to their type of cell wall. The Gram stain is ...
,
aerobic Aerobic means "requiring air," in which "air" usually means oxygen. Aerobic may also refer to * Aerobic exercise, prolonged exercise of moderate intensity * Aerobics, a form of aerobic exercise * Aerobic respiration, the aerobic process of cellu ...
,
spore In biology, a spore is a unit of sexual reproduction, sexual (in fungi) or asexual reproduction that may be adapted for biological dispersal, dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores fo ...
-forming
bacillus ''Bacillus'', from Latin "bacillus", meaning "little staff, wand", is a genus of Gram-positive, rod-shaped bacteria, a member of the phylum ''Bacillota'', with 266 named species. The term is also used to describe the shape (rod) of other so-sh ...
commonly found in soil. ''Bacillus pumilus'' spores—with the exception of mutant strain ATCC 7061—generally show high resistance to environmental stresses, including
UV light Ultraviolet radiation, also known as simply UV, is electromagnetic radiation of wavelengths of 10–400 nanometers, shorter than that of visible light, but longer than X-rays. UV radiation is present in sunlight and constitutes about 10% of t ...
exposure,
desiccation Desiccation is the state of extreme dryness, or the process of extreme drying. A desiccant is a hygroscopic (attracts and holds water) substance that induces or sustains such a state in its local vicinity in a moderately sealed container. The ...
, and the presence of
oxidizer An oxidizing agent (also known as an oxidant, oxidizer, electron recipient, or electron acceptor) is a substance in a redox chemical reaction that gains or " accepts"/"receives" an electron from a (called the , , or ''electron donor''). In ot ...
s such as hydrogen peroxide. Strains of ''B. pumilus'' found at the
NASA The National Aeronautics and Space Administration (NASA ) is an independent agencies of the United States government, independent agency of the federal government of the United States, US federal government responsible for the United States ...
Jet Propulsion Laboratory The Jet Propulsion Laboratory (JPL) is a Federally funded research and development centers, federally funded research and development center (FFRDC) in La Cañada Flintridge, California, Crescenta Valley, United States. Founded in 1936 by Cali ...
were found to be particularly resistant to
hydrogen peroxide Hydrogen peroxide is a chemical compound with the formula . In its pure form, it is a very pale blue liquid that is slightly more viscosity, viscous than Properties of water, water. It is used as an oxidizer, bleaching agent, and antiseptic, usua ...
. A strain of ''B. pumilus'' isolated from black tiger shrimp (''
Penaeus monodon ''Penaeus monodon'', commonly known as the giant tiger prawn, Asian tiger shrimp, black tiger shrimp, and other names, is a marine crustacean that is widely reared for food. Taxonomy ''Penaeus monodon'' was species description, first described ...
'') was found to have high salt tolerance and to inhibit the growth of marine pathogens, including ''
Vibrio alginolyticus ''Vibrio alginolyticus'' is a Gram-negative marine bacterium. It is medically important since it causes otitis and wound infection. It is also present in the bodies of animals such as pufferfish, where it is responsible for the production of th ...
'', when cultured together.


Genome and cell structure

''Bacillus pumilus'' contains one circular chromosome including about 4000 genes and 3600-3900 proteins with varying length in the range of 3.7 to 3.8 Mbp. 41% of the DNA base pairs in ''B. pumilus'' are G-C. The cellular structure of ''B. pumilus'' is similar to other ''Bacillus'' species such as ''B. subtilis'', ''B. megaterium'', and ''B. cereus'', the outer layer of the peptidoglycan cross-links in ''B. pumilus'' is covered by teichoic and lipoteichoic acids same as the most other Gram positive bacteria. These acids contain polyglycosyl phosphates with mono- and disaccharides as their monomers that can play a role in adhesion to different surfaces like the host cells. On the other hand, these phosphate groups on the surface of ''B. pumilus'' can provide net negative charge on the cell surface that allowing to capture some essential cations such as Ca2+ and Mg2+ that are necessary for cell life.


Industrial use

''Bacillus pumilus'' strain GB34 is used as an active ingredient in agricultural fungicides. Growth of the bacterium on plant roots prevents ''
Rhizoctonia ''Rhizoctonia'' is a genus of fungi in the family Ceratobasidiaceae. Species form thin, effused, corticioid basidiocarps (fruit bodies), but are most frequently found in their sterile, anamorph state. ''Rhizoctonia'' species are saprotrophic, ...
'' and ''
Fusarium ''Fusarium'' (; ) is a large genus of filamentous fungi, part of a group often referred to as hyphomycetes, widely distributed in soil and associated with plants. Most species are harmless saprobes, and are relatively abundant members of the s ...
'' spores from germinating. ''Bacillus pumilus'' (ATCC 27142) may be utilized (as a
biological indicator A bioindicator is any species (an indicator species) or group of species whose function, population, or status can reveal the qualitative status of the environment. The most common indicator species are animals. For example, copepods and other sma ...
or 'BI' for short) to monitor Gamma, Electron Beam (E-beam), or X-ray radiation sterilization processes. However, the relevance of this practice has dwindled rapidly in the last 30 years due to the discovery of wild-type organisms, like ''
Deinococcus radiodurans ''Deinococcus radiodurans'' is a bacterium, an extremophile and one of the most radiation-resistant organisms known. It can survive cold, dehydration, vacuum, and acid, and therefore is known as a polyextremophile. ''The Guinness Book Of World ...
'', that have proven to have higher D-values and have unseated ''B. pumilus'' as recognized worst-case radiation challenge organism. As such, the International Standards Organization (ISO) no longer recognizes ''B. pumilus'' as a BI method of validation or routine monitoring of a terminal radiation sterilization process for medical devices labeled as 'sterile'. Instead, parametric means are recognized, using dosimetry to monitor delivered radiation dose. The dose is established using information about the number and types of viable microbes in/on the product and/or its sterile barrier system packaging. The industry term for these microbes as they relate to a sterile medical device is ''
bioburden Bioburden is normally defined as the number of bacteria living on a surface that has not been sterilized. The term is most often used in the context of bioburden testing, also known as microbial limit testing, which is performed on pharmaceutical ...
''. Bioburden information coupled with dosimetry and subsequent tests of sterility are collectively used to perform verification dose experiments, which validate the terminal radiation sterilization dose. This dose supports the sterility assurance level (SAL) claim made by the product and its manufacturer. Most medical devices possess an SAL claim of 10E-6, that is one-in-one-million probability of
t least T, or t, is the twentieth letter of the Latin alphabet, used in the modern English alphabet, the alphabets of other western European languages and others worldwide. Its name in English is ''tee'' (pronounced ), plural ''tees''. It is d ...
one microbe making it through the sterilization process. The unit of measure for radiation dose for this purpose is kilogray, and a common radiation sterilization dose is 25 kilogray (kGy); however less or more dose is also quite common, as backed by validation data.


See also

*''
Bacillus marinus ''Jeotgalibacillus marinus'' is a bacterium used as a soil inoculant in agriculture and horticulture Horticulture (from ) is the art and science of growing fruits, vegetables, flowers, trees, shrubs and ornamental plants. Horticulture is com ...
'' *''
Bacillus lentimorbus ''Bacillus lentimorbus'' is a Gram-positive bacterium used as a soil or plant inoculant in agriculture and horticulture. It is the causative agent of Milky disease in some scarab beetle larvae.Karen E. Rippere, Monique T. Tran, Allan A. Youste ...
'' *''
Bacillus oleronius ''Bacillus oleronius'' is a Gram-negative bacterium belonging to the genus ''Bacillus''. However, ''Bacillus oleronius'' has Gram-positive cell wall components shared among all bacillus species (Lacey N, 2007). It was first described in 1995 an ...
''


References


Further reading


External links


Type strain of ''Bacillus pumilus'' at Bac''Dive'' - the Bacterial Diversity Metadatabase
{{Taxonbar, from=Q4838979 pumilus Food microbiology Fungicides Extremophiles