Axel T. Brunger (born November 25, 1956) is a
German American
German Americans (german: Deutschamerikaner, ) are Americans who have full or partial German ancestry. With an estimated size of approximately 43 million in 2019, German Americans are the largest of the self-reported ancestry groups by the Unit ...
biophysicist
Biophysics is an interdisciplinary science that applies approaches and methods traditionally used in physics to study biological phenomena. Biophysics covers all scales of biological organization, from molecular to organismic and populations. B ...
. He is Professor of Molecular and Cellular Physiology at
Stanford University, and a
Howard Hughes Medical Institute
The Howard Hughes Medical Institute (HHMI) is an American non-profit medical research organization based in Chevy Chase, Maryland. It was founded in 1953 by Howard Hughes, an American business magnate, investor, record-setting pilot, engineer, f ...
Investigator.
He served as the Chair of the Department of Molecular and Cellular Physiology (2013–2017).
Early life
Brunger was born in
Leipzig, Germany
Leipzig ( , ; Upper Saxon: ) is the most populous city in the German state of Saxony. Leipzig's population of 605,407 inhabitants (1.1 million in the larger urban zone) as of 2021 places the city as Germany's eighth most populous, as wel ...
, on November 25, 1956. He graduated with a degree in Physics and Mathematics from the
University of Hamburg
The University of Hamburg (german: link=no, Universität Hamburg, also referred to as UHH) is a public research university in Hamburg, Germany. It was founded on 28 March 1919 by combining the previous General Lecture System ('' Allgemeines Vor ...
in 1977. He completed his Diplom in Physics from the
University of Hamburg
The University of Hamburg (german: link=no, Universität Hamburg, also referred to as UHH) is a public research university in Hamburg, Germany. It was founded on 28 March 1919 by combining the previous General Lecture System ('' Allgemeines Vor ...
in 1980. He completed his PhD in Biophysics from
Technical University of Munich
The Technical University of Munich (TUM or TU Munich; german: Technische Universität München) is a public research university in Munich, Germany. It specializes in engineering, technology, medicine, and applied and natural sciences.
Establis ...
in 1982, advised by
Klaus Schulten
Klaus Schulten (January 12, 1947 – October 31, 2016) was a German-American computational biophysicist and the Swanlund Professor of Physics at the University of Illinois at Urbana-Champaign. Schulten used supercomputing techniques to appl ...
.
Academic career
Brunger held a NATO postdoctoral fellowship to work with
Martin Karplus
Martin Karplus (born March 15, 1930) is an Austrian and American theoretical chemist. He is the Director of the Biophysical Chemistry Laboratory, a joint laboratory between the French National Center for Scientific Research and the University of ...
at
Harvard University
Harvard University is a private Ivy League research university in Cambridge, Massachusetts. Founded in 1636 as Harvard College and named for its first benefactor, the Puritan clergyman John Harvard, it is the oldest institution of high ...
, where he subsequently became a research associate in the Department of Chemistry after a brief return to Germany.
He joined the Molecular Biophysics and Biochemistry department at
Yale University
Yale University is a Private university, private research university in New Haven, Connecticut. Established in 1701 as the Collegiate School, it is the List of Colonial Colleges, third-oldest institution of higher education in the United Sta ...
in 1987 and moved to
Stanford University in 2000.
Brunger was elected to the
United States National Academy of Sciences
The National Academy of Sciences (NAS) is a United States nonprofit, non-governmental organization. NAS is part of the National Academies of Sciences, Engineering, and Medicine, along with the National Academy of Engineering (NAE) and the Nat ...
in 2005
and won the inaugural
DeLano Award for Computational Biosciences
The DeLano Award for Computational Biosciences is a prize in the field of computational biology. It is awarded annually for "the most accessible and innovative development or application of computer technology to enhance research in the life scienc ...
in 2011.
Research
Brunger is known for developing a computer program called
CNS used for solving structures based on
X-ray diffraction or
solution NMR data, which was first released in 1992. The program is a major extension of a 1987 program developed with
John Kuriyan
John Kuriyan is the Dean of Basic Sciences and a Professor of Biochemistry at Vanderbilt University School of Medicine. He was formerly the Chancellor's Professor at the University of California, Berkeley in the departments of Molecular and Cell B ...
and Karplus called
X-PLOR
X-PLOR is a computer software package for computational structural biology originally developed by Axel T. Brunger at Yale University. It was first published in 1987 as an offshoot of CHARMM - a similar program that ran on supercomputers made by C ...
, whose original inspiration was motivated by
Marius Clore's efforts in interpreting NMR data and which has been extended by Clore's continued development of
XPLOR-NIH Xplor-NIH is a highly sophisticated and flexible biomolecular structure determination program which includes an interface to the legacy X-PLOR program. The main developers are Charles Schwieters and Marius Clore of the National Institutes of Heal ...
.
These programs make use of a method called
simulated annealing
Simulated annealing (SA) is a probabilistic technique for approximating the global optimum of a given function. Specifically, it is a metaheuristic to approximate global optimization in a large search space for an optimization problem. ...
in conjunction with
molecular dynamics
Molecular dynamics (MD) is a computer simulation method for analyzing the physical movements of atoms and molecules. The atoms and molecules are allowed to interact for a fixed period of time, giving a view of the dynamic "evolution" of th ...
to refine protein structures. X-PLOR was the first time a modern optimization technique was applied to the problem of crystallographic refinement. Brunger also subsequently introduced the RFree technique to cross-validate the model given the observed data.
In the mid-1990s, his team extended X-PLOR into a complete system to solve structures, which then became the more full-featured tool
CNS, capable of performing a series of steps necessary for crystallography structure determination, such as obtaining phases from experimental data and
molecular replacement
Molecular replacement (or MR) is a method of solving the phase problem in X-ray crystallography. MR relies upon the existence of a previously solved protein structure which is similar to our unknown structure from which the diffraction data is de ...
phasing from known homologous structures.
Brunger's research group currently studies the molecular mechanism of
synaptic vesicle
In a neuron, synaptic vesicles (or neurotransmitter vesicles) store various neurotransmitters that are released at the synapse. The release is regulated by a voltage-dependent calcium channel. Vesicles are essential for propagating nerve impu ...
fusion in
neurotransmission
Neurotransmission (Latin: ''transmissio'' "passage, crossing" from ''transmittere'' "send, let through") is the process by which signaling molecules called neurotransmitters are released by the axon terminal of a neuron (the presynaptic neuron), ...
.
References
External links
Biography of Axel T. BrungerProfile of Axel T. BrungerPNAS Inaugural ProfileWebsite of Axel T. Brunger
{{DEFAULTSORT:Brunger, Axel T.
1956 births
21st-century American physicists
University of Hamburg alumni
Technical University of Munich alumni
German emigrants to the United States
Harvard University staff
Yale Department of Molecular Biophysics & Biochemistry faculty
Living people
Howard Hughes Medical Investigators
Crystallographers
Stanford University School of Medicine faculty
Members of the United States National Academy of Sciences