Astacins are a family of multidomain
metalloendopeptidases which are either secreted or membrane-anchored.
These metallopeptidases belong to the
MEROPS
MEROPS is an online database for peptidases (also known as proteases, proteinases and proteolytic enzymes) and their inhibitors. The classification scheme for peptidases was published by Rawlings & Barrett in 1993, and that for protein inhibi ...
peptidase family M12, subfamily M12A (astacin family, clan MA(M)). The protein
fold
Fold, folding or foldable may refer to:
Arts, entertainment, and media
* ''Fold'' (album), the debut release by Australian rock band Epicure
*Fold (poker), in the game of poker, to discard one's hand and forfeit interest in the current pot
*Above ...
of the peptidase domain for members of this family resembles that of
thermolysin, the type example for clan MA and the predicted
active site residues for members of this family and thermolysin occur in the motif HEXXH.
The astacin family of metalloendopeptidases (EC 3.4.24.21) encompasses a range of proteins found in hydra to humans, in mature and developmental systems.
Their functions include
activation
Activation, in chemistry and biology, is the process whereby something is prepared or excited for a subsequent reaction.
Chemistry
In chemistry, "activation" refers to the reversible transition of a molecule into a nearly identical chemical ...
of
growth factors, degradation of
polypeptides, and processing of
extracellular protein
Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, respon ...
s.
The
proteins are synthesised with N-terminal signal and pro-enzyme sequences, and many contain multiple domains C-terminal to the
protease
A protease (also called a peptidase, proteinase, or proteolytic enzyme) is an enzyme that catalyzes (increases reaction rate or "speeds up") proteolysis, breaking down proteins into smaller polypeptides or single amino acids, and spurring the form ...
domain. They are either
secreted from cells, or are associated with the
plasma membrane
The cell membrane (also known as the plasma membrane (PM) or cytoplasmic membrane, and historically referred to as the plasmalemma) is a biological membrane that separates and protects the interior of all cells from the outside environment (t ...
.
The astacin molecule adopts a kidney shape, with a deep active-site cleft between its N- and C-terminal
domains.
The
zinc
Zinc is a chemical element with the symbol Zn and atomic number 30. Zinc is a slightly brittle metal at room temperature and has a shiny-greyish appearance when oxidation is removed. It is the first element in group 12 (IIB) of the periodic t ...
ion, which lies at the bottom of the cleft, exhibits a unique penta-coordinated mode of binding, involving 3
histidine
Histidine (symbol His or H) is an essential amino acid that is used in the biosynthesis of proteins. It contains an α-amino group (which is in the protonated –NH3+ form under biological conditions), a carboxylic acid group (which is in the ...
residues, a
tyrosine
-Tyrosine or tyrosine (symbol Tyr or Y) or 4-hydroxyphenylalanine is one of the 20 standard amino acids that are used by cells to synthesize proteins. It is a non-essential amino acid with a polar side group. The word "tyrosine" is from the Gr ...
and a water molecule (which is also bound to the
carboxylate side chain of Glu93).
The N-terminal domain comprises 2
alpha-helices and a 5-stranded
beta-sheet. The overall topology of this domain is shared by the
archetypal zinc-endopeptidase thermolysin. Astacin protease
domains also share common features with
serralysins,
matrix metalloendopeptidases, and
snake
Snakes are elongated, limbless, carnivorous reptiles of the suborder Serpentes . Like all other squamates, snakes are ectothermic, amniote vertebrates covered in overlapping scales. Many species of snakes have skulls with several more j ...
venom
Venom or zootoxin is a type of toxin produced by an animal that is actively delivered through a wound by means of a bite, sting, or similar action. The toxin is delivered through a specially evolved ''venom apparatus'', such as fangs or a ...
proteases; they cleave
peptide bond
In organic chemistry, a peptide bond is an amide type of covalent chemical bond linking two consecutive alpha-amino acids from C1 (carbon number one) of one alpha-amino acid and N2 ( nitrogen number two) of another, along a peptide or protein c ...
s in
polypeptides such as
insulin
Insulin (, from Latin ''insula'', 'island') is a peptide hormone produced by beta cells of the pancreatic islets encoded in humans by the ''INS'' gene. It is considered to be the main anabolic hormone of the body. It regulates the metabol ...
B
chain
A chain is a wikt:series#Noun, serial assembly of connected pieces, called links, typically made of metal, with an overall character similar to that of a rope in that it is flexible and curved in compression (physics), compression but line (g ...
and
bradykinin, and in proteins such as
casein
Casein ( , from Latin ''caseus'' "cheese") is a family of related phosphoproteins ( αS1, aS2, β, κ) that are commonly found in mammalian milk, comprising about 80% of the proteins in cow's milk and between 20% and 60% of the proteins in human ...
and
gelatin
Gelatin or gelatine (from la, gelatus meaning "stiff" or "frozen") is a translucent, colorless, flavorless food ingredient, commonly derived from collagen taken from animal body parts. It is brittle when dry and rubbery when moist. It may also ...
; and they have arylamidase activity.
History
In 1965 R. Zwilling observed during his doctorate work that the ''oncosphaere'' of the mouse tapeworm ''Hymenolepis diminuta'' easily hatched ''in vitro'' in the presence of the digestive fluid of its intermediate host ''Tenebrio molitor'' (Meal beetle). After the digestion of its protein shell the ''oncosphaere'' started its typical hook movements. The same effect could not be achieved with bovine trypsin which raised the question, by what different proteases invertebrate animals might digest their protein diet. This was unknown at that time.
From the small ''Tenebrio beetles'' sufficient digestive fluid for extended studies could not be obtained. But from large crayfish cultures ''(Astacus astacus)'' it was possible to gather up to 100-200 ml gastric juice from the living animals by introducing a glass capillary through the ''proboscis'' into the ''cardia'' (stomach). From the resulting darkbrown fluid the proteolytic fractions were purified by gel-filtration, anion exchange chromatography and affinity chromatography to a high degree. The freeze-dried material obtained in this way has remained the basis for all further studies on crayfish astacin, including the elucidation of the amino acid sequence, genomic organization and spatial configuration.
On the basis of its primary structure one proteolytic fraction from ''Astacus'' obviously represented an unknown protein and was named ''Astacin''.
In addition to astacin the crayfish possesses an invertebrate trypsin, but no pepsin.
Soon afterwards Wozney et al.
have shown that the astacin sequence is inserted into the human bone morphogenetic protein (BMP) with significant homology.
Astacin family members
Proteins containing the astacin domain include:
*
Astacin-like metallo-endopeptidase (ASTL)
*
Bone morphogenetic protein 1
Bone morphogenetic protein 1, also known as BMP1, is a protein which in humans is encoded by the ''BMP1'' gene. There are seven isoforms of the protein created by alternate splicing.
Function
BMP1 belongs to the peptidase M12A family of bone mor ...
(BMP1)
*
Meprin A subunit alpha (MEP1A)
*
Meprin A subunit beta (MEP1B)
*
Tolloid-like protein 1 (TLL1)
*
Tolloid-like protein 2 (TLL2)
References
Further reading
*
External links
MEROPS family M12
{{Portal bar, Biology, border=no
Protein domains
EC 3.4.24
Protein families