Argininosuccinate synthase or synthetase (ASS; ) is an
enzyme
Enzymes () are proteins that act as biological catalysts by accelerating chemical reactions. The molecules upon which enzymes may act are called substrate (chemistry), substrates, and the enzyme converts the substrates into different molecule ...
that catalyzes the synthesis of
argininosuccinate from
citrulline
The organic compound citrulline is an α-amino acid. Its name is derived from '' citrullus'', the Latin word for watermelon. Although named and described by gastroenterologists since the late 19th century, it was first isolated from watermelon in 1 ...
and
aspartate. In humans, argininosuccinate synthase is encoded by the ''
ASS gene'' located on
chromosome 9.
ASS is responsible for the third step of the
urea cycle
The urea cycle (also known as the ornithine cycle) is a cycle of biochemical reactions that produces urea (NH2)2CO from ammonia (NH3). Animals that use this cycle, mainly amphibians and mammals, are called ureotelic.
The urea cycle converts hi ...
and one of the reactions of the
citrulline-NO cycle.
Expression
The expressed ASS gene is at least 65 kb in length, including at least 12
introns.
In humans, ''ASS'' is expressed mostly in the cells of the
liver
The liver is a major organ only found in vertebrates which performs many essential biological functions such as detoxification of the organism, and the synthesis of proteins and biochemicals necessary for digestion and growth. In humans, it ...
and
kidney
The kidneys are two reddish-brown bean-shaped organs found in vertebrates. They are located on the left and right in the retroperitoneal space, and in adult humans are about in length. They receive blood from the paired renal arteries; bloo ...
.
Mechanism
In the first step of the catalyzed reaction,
citrulline
The organic compound citrulline is an α-amino acid. Its name is derived from '' citrullus'', the Latin word for watermelon. Although named and described by gastroenterologists since the late 19th century, it was first isolated from watermelon in 1 ...
attacks the α-phosphate of
ATP
ATP may refer to:
Companies and organizations
* Association of Tennis Professionals, men's professional tennis governing body
* American Technical Publishers, employee-owned publishing company
* ', a Danish pension
* Armenia Tree Project, non ...
to form citrulline adenylate, a reactive intermediate. The attachment of
AMP to the ureido (urea-like) group on citrulline activates the carbonyl center for subsequent
nucleophilic attack. This activation facilitates the second step, in which the α-amino group of
aspartate attacks the ureido group. Attack by aspartate is the
rate-limiting step of the reaction. This step produces free AMP and L-
argininosuccinate.
Thermodynamically, adenylation of the citrulline ureido group is more favorable than the analogous
phosphorylation
In chemistry, phosphorylation is the attachment of a phosphate group to a molecule or an ion. This process and its inverse, dephosphorylation, are common in biology and could be driven by natural selection. Text was copied from this source, ...
. Additionally, attack by citrulline at the α-phosphate of ATP produces an equivalent of
pyrophosphate
In chemistry, pyrophosphates are phosphorus oxyanions that contain two phosphorus atoms in a P–O–P linkage. A number of pyrophosphate salts exist, such as disodium pyrophosphate (Na2H2P2O7) and tetrasodium pyrophosphate (Na4P2O7), among o ...
, which can be hydrolyzed in a thermodynamically favorable reaction to provide additional energy to drive the adenylation.
Structure
Quaternary
Argininosuccinate synthetase is a homotetramer, with each subunit consisting of 412 residues.
The interfaces between subunits contain a number of
salt bridges and
hydrogen bonds, and the C-terminus of each subunit is involved in oligomerization by interacting with the C-termini and nucleotide-binding domains of the other subunits.
Active site
X-ray crystal structures have been generated for argininosuccinate synthetase from ''
Thermus thermophilus
''Thermus thermophilus'' is a Gram-negative bacterium used in a range of biotechnological applications, including as a model organism for genetic manipulation, structural genomics, and systems biology. The bacterium is extremely thermophilic ...
'', ''
E. coli'', ''Thermotoga maritime'', and ''
Homo sapiens
Humans (''Homo sapiens'') are the most abundant and widespread species of primate, characterized by bipedalism and exceptional cognitive skills due to a large and complex brain. This has enabled the development of advanced tools, culture, ...
''. In ASS from ''T. thermophilus'', ''E. coli'', and ''H. sapiens'', citrulline and aspartate are tightly bound in the
active site by interactions with
serine and
arginine
Arginine is the amino acid with the formula (H2N)(HN)CN(H)(CH2)3CH(NH2)CO2H. The molecule features a guanidino group appended to a standard amino acid framework. At physiological pH, the carboxylic acid is deprotonated (−CO2−) and both the a ...
residues; interactions of the substrates with other residues in the active site vary by species. In ''T. thermophilus'', the ureido group of citrulline appears to be repositioned during nucleophilic attack to attain sufficient proximity to the α-phosphate of ATP.
In ''E. coli'', it is suggested that binding of ATP causes a conformational shift that brings together the nucleotide-binding domain and the synthetase domain.
An argininosuccinate synthetase structure with a bound ATP in the active site has not been attained, although modeling suggests that the distance between ATP and the ureido group of citrulline is smaller in human argininosuccinate synthetase than in the ''E. coli'' variety, so it is likely that a much smaller conformational change is necessary for catalysis.
The ATP binding domain of argininosuccinate synthetase is similar to that of other N-type ATP
pyrophosphatases
Pyrophosphatases, also known as diphosphatases, are acid anhydride hydrolases that act upon diphosphate bonds.
Examples include:
* Inorganic pyrophosphatase, which acts upon the free pyrophosphate ion
* Tobacco acid pyrophosphatase, which cataly ...
.
Function
Argininosuccinate synthetase is involved in the synthesis of
creatine, polyamines,
arginine
Arginine is the amino acid with the formula (H2N)(HN)CN(H)(CH2)3CH(NH2)CO2H. The molecule features a guanidino group appended to a standard amino acid framework. At physiological pH, the carboxylic acid is deprotonated (−CO2−) and both the a ...
,
urea, and
nitric oxide
Nitric oxide (nitrogen oxide or nitrogen monoxide) is a colorless gas with the formula . It is one of the principal oxides of nitrogen. Nitric oxide is a free radical: it has an unpaired electron, which is sometimes denoted by a dot in its ...
.
Arginine synthesis
The transformation of citrulline into argininosuccinate is the rate-limiting step in arginine synthesis. The activity of argininosuccinate synthetase in arginine synthesis occurs largely in at the outer
mitochondrial
A mitochondrion (; ) is an organelle found in the cells of most Eukaryotes, such as animals, plants and fungi. Mitochondria have a double membrane structure and use aerobic respiration to generate adenosine triphosphate (ATP), which is us ...
membrane of periportal
liver
The liver is a major organ only found in vertebrates which performs many essential biological functions such as detoxification of the organism, and the synthesis of proteins and biochemicals necessary for digestion and growth. In humans, it ...
cells as part of the urea cycle, with some activity occurring in cortical
kidney
The kidneys are two reddish-brown bean-shaped organs found in vertebrates. They are located on the left and right in the retroperitoneal space, and in adult humans are about in length. They receive blood from the paired renal arteries; bloo ...
cells.
{
Genetic defects that cause incorrect localization of argininosuccinate synthetase to the outer mitochondrial membrane cause type II citrullinemia.
In
fetuses
A fetus or foetus (; plural fetuses, feti, foetuses, or foeti) is the unborn offspring that develops from an animal embryo. Following embryonic development the fetal stage of development takes place. In human prenatal development, fetal devel ...
and infants, arginine is also produced via argininosuccinate synthetase activity in intestinal cells, presumably to supplement the low level of arginine found in mother's milk. Expression of argininosuccinate synthetase in the intestines ceases after two to three years of life.
It is thought that regulation of argininosuccinate synthetase activity in arginine synthesis occurs primarily at the
transcriptional level in response to
glucocorticoids,
cAMP,
glucagon, and
insulin
Insulin (, from Latin ''insula'', 'island') is a peptide hormone produced by beta cells of the pancreatic islets encoded in humans by the ''INS'' gene. It is considered to be the main anabolic hormone of the body. It regulates the metabol ...
.
It has also been demonstrated ''in vitro'' that arginine down-regulates argininosuccinate synthetase expression, while citrulline up-regulates it.
Citrulline-NO cycle
The enzyme
endothelial nitric oxide synthase produces
nitric oxide
Nitric oxide (nitrogen oxide or nitrogen monoxide) is a colorless gas with the formula . It is one of the principal oxides of nitrogen. Nitric oxide is a free radical: it has an unpaired electron, which is sometimes denoted by a dot in its ...
from arginine in
endothelial cells.
Argininosuccinate synthetase and
argininosuccinate lyase recycle citrulline, a byproduct of nitric oxide production, into arginine. Since nitric oxide is an important signaling molecule, this role of ASS is important to vascular physiology. In this role, argininosuccinate synthetase activity is regulated largely by inflammatory cellular signal molecules such as
cytokines.
In endothelial cells, it has been shown that ASS expression is increased by laminar
shear stress due to pulsative blood flow.
Emerging evidence suggests that ASS may also be subject to regulation by phosphorylation at the Ser-328 residue by
protein kinase C-α
and by
nitrosylation at the Cys-132 residue by nitric oxide synthase.
Role in disease
Citrullinemia
Citrullinemia is an inherited autosomal recessive disease.
At least 50
mutation
In biology, a mutation is an alteration in the nucleic acid sequence of the genome of an organism, virus, or extrachromosomal DNA. Viral genomes contain either DNA or RNA. Mutations result from errors during DNA or viral replication, m ...
s that cause type I citrullinemia have been identified in the ASS gene. Most of these mutations substitute one amino acid for another in ASS. These mutations likely affect the structure of the enzyme and its ability to bind to citrulline, aspartate, and other molecules. A few mutations lead to the production of an abnormally short enzyme that cannot effectively play its role in the urea cycle.
Defects in ASS disrupt the third step of the urea cycle, preventing the liver from processing excess nitrogen into urea. As a result, nitrogen (in the form of
ammonia
Ammonia is an inorganic compound of nitrogen and hydrogen with the formula . A stable binary hydride, and the simplest pnictogen hydride, ammonia is a colourless gas with a distinct pungent smell. Biologically, it is a common nitrogeno ...
) and other byproducts of the urea cycle (such as citrulline) build up in the bloodstream. Ammonia is toxic, particularly to the
nervous system
In Biology, biology, the nervous system is the Complex system, highly complex part of an animal that coordinates its Behavior, actions and Sense, sensory information by transmitting action potential, signals to and from different parts of its ...
. An accumulation of ammonia during the first few days of life leads to poor feeding,
vomiting
Vomiting (also known as emesis and throwing up) is the involuntary, forceful expulsion of the contents of one's stomach through the mouth and sometimes the nose.
Vomiting can be the result of ailments like food poisoning, gastroenteri ...
,
seizure
An epileptic seizure, informally known as a seizure, is a period of symptoms due to abnormally excessive or synchronous neuronal activity in the brain. Outward effects vary from uncontrolled shaking movements involving much of the body with l ...
s, and the other signs and symptoms of type I citrullinemia.
Treatment for this defect includes a low-protein diet and dietary supplementation with
arginine
Arginine is the amino acid with the formula (H2N)(HN)CN(H)(CH2)3CH(NH2)CO2H. The molecule features a guanidino group appended to a standard amino acid framework. At physiological pH, the carboxylic acid is deprotonated (−CO2−) and both the a ...
and
phenylacetate Phenylacetate may refer to:
* Phenyl acetate, the ester of phenol and acetic acid
* The conjugate base of phenylacetic acid
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