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Xanthomonas Oryzae
''Xanthomonas oryzae'' is a species of bacteria. The major host of the bacterium is rice. The species contains two pathovars, neither of which is native to Europe: ''X. o.'' pv. ''oryzae'' and ''X. o.'' pv. ''oryzicola''. ''Xanthomonas oryzae'' epidemics can cause yield losses ranging from 2-74%, and the bacteria can be carried on rice seeds, causing further disease spread. The host resistance gene, '' Xa21'', from '' Oryza longistaminata'', is integrated into the genome of ''Oryza sativa ''Oryza sativa'', having the common name Asian cultivated rice, is the much more common of the two rice species cultivated as a cereal, the other species being ''Oryza glaberrima, O. glaberrima'', African rice. It was History of rice cultivation ...'' for its broad-range resistance to rice leaf blight caused by ''X. o.'' pv. ''oryzae''. References External links Xanthomonas Genomics Resource web-based database and communication forum to facilitate genomic approaches to the study of xa ...
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Xanthomonas Oryzae Pv
''Xanthomonas'' (from greek: ''xanthos'' – "yellow"; ''monas'' – "entity") is a genus of bacteria, many of which cause plant diseases. There are at least 27 plant associated ''Xanthomonas spp.'', that all together infect at least 400 plant species. Different species typically have specific host and/or tissue range and colonization strategies. Taxonomy The genus ''Xanthomonas'' has been subject of numerous taxonomic and phylogenetic studies and was first described as ''Bacterium vesicatorium'' as a pathogen of pepper and tomato in 1921. Dowson later reclassified the bacterium as ''Xanthomonas campestris'' and proposed the genus ''Xanthomonas''.''Xanthomonas'' was first described as a monotypic genus and further research resulted in the division into two groups, A and B. Later work using DNA:DNA hybridization has served as a framework for the general ''Xanthomonas'' species classification. Other tools, including multilocus sequence analysis and amplified fragment-length polymor ...
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Bacteria
Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of Prokaryote, prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit the air, soil, water, Hot spring, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria play a vital role in many stages of the nutrient cycle by recycling nutrients and the nitrogen fixation, fixation of nitrogen from the Earth's atmosphere, atmosphere. The nutrient cycle includes the decomposition of cadaver, dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, suc ...
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Rice
Rice is a cereal grain and in its Domestication, domesticated form is the staple food of over half of the world's population, particularly in Asia and Africa. Rice is the seed of the grass species ''Oryza sativa'' (Asian rice)—or, much less commonly, ''Oryza glaberrima'' (African rice). Asian rice was domesticated in China some 13,500 to 8,200 years ago; African rice was domesticated in Africa about 3,000 years ago. Rice has become commonplace in many cultures worldwide; in 2023, 800 million tons were produced, placing it third after sugarcane and maize. Only some 8% of rice is traded internationally. China, India, and Indonesia are the largest consumers of rice. A substantial amount of the rice produced in developing nations is lost after harvest through factors such as poor transport and storage. Rice yields can be reduced by pests including insects, rodents, and birds, as well as by weeds, and by List of rice diseases, diseases such as rice blast. Traditional rice polyc ...
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Pathovar
A pathovar is a bacterial strain or set of strains with the same or similar characteristics, that is differentiated at infrasubspecific level from other strains of the same species or subspecies on the basis of distinctive pathogenicity to one or more plant hosts. Pathovars are named as a ternary or quaternary addition to the species binomial name, for example the bacterium that causes citrus canker ''Xanthomonas axonopodis'', has several pathovars with different host ranges, Xanthomonas axonopodis pv. citri, ''X. axonopodis'' pv. ''citri'' is one of them; the abbreviation 'pv.' means pathovar. The type (biology), type strains of pathovars are pathotypes, which are distinguished from the types (holotype, neotype, etc.) of the species to which the pathovar belongs. See also * Infraspecific names in botany * Phytopathology * Trinomen, infraspecific names in zoology (subspecies only) References

Biological classification Bacterial plant pathogens and diseases Microbio ...
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Plant Disease Resistance
Plant disease resistance protects plants from pathogens in two ways: by pre-formed structures and chemicals, and by infection-induced responses of the immune system. Relative to a susceptible plant, disease resistance is the reduction of pathogen growth on or in the plant (and hence a reduction of disease), while the term disease tolerance describes plants that exhibit little disease damage despite substantial pathogen levels. Disease outcome is determined by the three-way interaction of the pathogen, the plant, and the environmental conditions (an interaction known as the disease triangle). Defense-activating compounds can move cell-to-cell and systematically through the plant's vascular system. However, plants do not have circulating immune cells, so most cell types exhibit a broad suite of antimicrobial defenses. Although obvious ''qualitative'' differences in disease resistance can be observed when multiple specimens are compared (allowing classification as "resistant" or "su ...
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Xa21
Pamela Christine Ronald (born January 29, 1961) is an American plant pathologist and geneticist. She is a professor in the Department of Plant Pathology and conducts research at the Genome Center at the University of California, Davis and a member of the Innovative Genomics Institute at the University of California, Berkeley. She also serves as Director of Grass Genetics at the Joint BioEnergy Institute in Emeryville, California. In 2018 she served as a visiting professor at Stanford University in the Stanford University centers and institutes#Freeman Spogli Institute for International Studies, Center on Food Security and the Environment. Her laboratory has genetically engineered rice for resistance to diseases and tolerance to flooding, which are serious problems of rice crops in Asia and Africa. Ronald's research has been published in ''Science'', ''Nature'' and other leading peer-reviewed scientific journals, and has also been featured in ''The New York Times'', ''Organic Gard ...
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Oryza Longistaminata
''Oryza longistaminata'' is a perennial species of grass from the same genus as cultivated rice (''O. sativa''). It is native to most of sub-Saharan Africa and Madagascar. It has been introduced into the United States, where it is often regarded as a noxious weed A noxious weed, harmful weed or injurious weed is a weed that has been designated by an agricultural or other governing authority as a plant that is harmful to agricultural or horticultural crops, natural habitats or ecosystems, or humans or lives .... Its common names are longstamen rice and red rice. The host resistance gene, ''Xa21'', from ''O. longistaminata'', has been integrated into the genome of '' O. sativa'' as it confers broad resistance to rice blight disease caused by ''Xanthomonas oryzae'' pv. ''oryzae''. Distribution ''O. longistaminata'' is native throughout Africa. References External links longistaminata Grasses of Africa Plants described in 1914 Weeds Taxa named by Auguste Chevalier
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Oryza Sativa
''Oryza sativa'', having the common name Asian cultivated rice, is the much more common of the two rice species cultivated as a cereal, the other species being ''Oryza glaberrima, O. glaberrima'', African rice. It was History of rice cultivation, first domesticated in the Yangtze River basin in China 13,500 to 8,200 years ago. ''Oryza sativa'' belongs to the genus ''Oryza'' and the BOP clade in the grass family Poaceae. With a genome consisting of 430megabase, Mbp across 12 chromosomes, it is renowned for being easy to Genetically modified rice, genetically modify and is a model organism for the study of the biology of cereals and Monocotyledon, monocots. Description ''O. sativa'' has an erect stalk stem that grows tall, with a smooth surface. The leaf is lanceolate, long, and grows from a ligule long. Image:Kerbau Jawa.jpg, Domestic buffalo, Water buffalo ploughing a rice paddyfield, Java File:Jumli Marshi Oryza sativa Rice.jpg, Jumli Marshi, brown rice from Nepal File: ...
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Proceedings Of The National Academy Of Sciences
''Proceedings of the National Academy of Sciences of the United States of America'' (often abbreviated ''PNAS'' or ''PNAS USA'') is a peer-reviewed multidisciplinary scientific journal. It is the official journal of the National Academy of Sciences, published since 1915, and publishes original research, scientific reviews, commentaries, and letters. According to ''Journal Citation Reports'', the journal has a 2022 impact factor of 9.4. ''PNAS'' is the second most cited scientific journal, with more than 1.9 million cumulative citations from 2008 to 2018. In the past, ''PNAS'' has been described variously as "prestigious", "sedate", "renowned" and "high impact". ''PNAS'' is a delayed open-access journal, with an embargo period of six months that can be bypassed for an author fee ( hybrid open access). Since September 2017, open access articles are published under a Creative Commons license. Since January 2019, ''PNAS'' has been online-only, although print issues are available ...
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Xanthomonas
''Xanthomonas'' (from greek: ''xanthos'' – "yellow"; ''monas'' – "entity") is a genus of bacteria, many of which cause plant pathology, plant diseases. There are at least 27 plant associated ''Xanthomonas spp.'', that all together infect at least 400 plant species. Different species typically have specific host and/or tissue range and colonization strategies. Taxonomy The genus ''Xanthomonas'' has been subject of numerous taxonomic and phylogenetic studies and was first described as ''Bacterium vesicatorium'' as a pathogen of pepper and tomato in 1921. Dowson later reclassified the bacterium as ''Xanthomonas campestris'' and proposed the genus ''Xanthomonas''.''Xanthomonas'' was first described as a monotypic genus and further research resulted in the division into two groups, A and B. Later work using DNA:DNA hybridization has served as a framework for the general ''Xanthomonas'' species classification. Other tools, including multilocus sequence analysis and amplified fragmen ...
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Bacterial Plant Pathogens And Diseases
Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit the air, soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria play a vital role in many stages of the nutrient cycle by recycling nutrients and the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in mutualistic, commensal and pa ...
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Rice Diseases
This article is a list of diseases of rice (''Oryza sativa''). Diseases have historically been one of the major causes of rice shortages. Bacterial diseases Fungal diseases Viruses *'' Rice black-streaked dwarf virus'' *'' Rice bunchy stunt virus'' *'' Rice dwarf virus'' *'' Rice gall dwarf virus'' *'' Rice giallume virus'' *'' Rice grassy stunt virus'' *'' Rice hoja blanca tenuivirus'' *'' Rice necrosis mosaic virus'' *'' Rice ragged stunt virus'' *'' Rice stripe necrosis virus'' *'' Rice stripe tenuivirus'' *'' Rice transitory yellowing virus'' *''Rice tungro bacilliform virus'' - see Tungro below *''Rice tungro spherical virus'' - see Tungro below *''Rice yellow mottle virus'' Miscellaneous diseases and disorders See also * :Insect pests of rice * List of rice varieties References {{reflist, 30em, refs= {{cite web , title=bacterial leaf blight of rice, ''Xanthomonas oryzae'' pv. ''oryzae'' Xanthomonadales: Xanthomonadaceae , website= Invasive.Org ...
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