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Xanthobacter Agilis
''Xanthobacter'' is a genus of Gram-negative bacteria from the family Xanthobacteraceae. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN). The phylogeny is based on whole-genome analysis. References

Hyphomicrobiales Bacteria genera {{Hyphomicrobiales-stub ...
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Bacteria
Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of Prokaryote, prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit the air, soil, water, Hot spring, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria play a vital role in many stages of the nutrient cycle by recycling nutrients and the nitrogen fixation, fixation of nitrogen from the Earth's atmosphere, atmosphere. The nutrient cycle includes the decomposition of cadaver, dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, suc ...
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Xanthobacter Flavus
''Xanthobacter flavus'' is a Gram-negative, nitrogen-fixing and facultatively autotrophic bacteria from the family of Xanthobacteraceae which has been isolated from turf podsol soil in Russia.Deutsche Sammlung von Mikroorganismen und Zellkulturenbr>/ref> ''Xanthobacter flavus'' has the ability to degrade phenol, oxalate and 1,4-dichlorobenzene 1,4-Dichlorobenzene (1,4-DCB, ''p''-DCB, or ''para''-dichlorobenzene, sometimes abbreviated as PDCB or para) is an aryl chloride and isomer of dichlorobenzene with the formula C6H4Cl2. This colorless solid has a strong odor. The molecule consist .... References Further reading * * * * * External linksType strain of ''Xanthobacter flavus'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Hyphomicrobiales Bacteria described in 1979 {{Hyphomicrobiales-stub ...
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Outgroup (cladistics)
In cladistics or phylogenetics, an outgroup is a more distantly related group of organisms that serves as a reference group when determining the evolutionary relationships of the ingroup, the set of organisms under study, and is distinct from sociological outgroups. Character states present in the ingroup but absent in the outgroup are (often) synapomorphies that provide empirical support for the inferred monophyly of the ingroup; character states that are present in the outgroup and some members of the ingroup are symplesiomorphies, and their complementary synapomorphies shared among some members of the ingroup provide hypotheses of relationship within the ingroup clade. The outgroup is used as a point of comparison for the ingroup and specifically allows for the phylogeny to be rooted. Because the polarity (direction) of character change can be determined only on a rooted phylogeny, the choice of outgroup is essential for understanding the evolution of traits along a phylogeny. ...
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List Of Prokaryotic Names With Standing In Nomenclature
List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclature of Prokaryotes. The database was curated from 1997 to June 2013 by Jean P. Euzéby. From July 2013 to January 2020, LPSN was curated by Aidan C. Parte. In February 2020, a new version of LPSN was published as a service of the Leibniz Institute DSMZ, thereby also integrating the Prokaryotic Nomenclature Up-to-date service and since 2022 LPSN is interconnected with the Type (Strain) Genome Server (TYGS), DSMZ's high-throughput platform for accurate genome-based taxonomy. See also * Code of Nomenclature of Prokaryotes Described from Sequence Data References External links List of Prokaryotic names with Standing in Nomenclature
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Bacteria
Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of Prokaryote, prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit the air, soil, water, Hot spring, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria play a vital role in many stages of the nutrient cycle by recycling nutrients and the nitrogen fixation, fixation of nitrogen from the Earth's atmosphere, atmosphere. The nutrient cycle includes the decomposition of cadaver, dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, suc ...
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Gram-negative
Gram-negative bacteria are bacteria that, unlike gram-positive bacteria, do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. Their defining characteristic is that their cell envelope consists of a thin peptidoglycan cell wall sandwiched between an inner ( cytoplasmic) membrane and an outer membrane. These bacteria are found in all environments that support life on Earth. Within this category, notable species include the model organism '' Escherichia coli'', along with various pathogenic bacteria, such as '' Pseudomonas aeruginosa'', '' Chlamydia trachomatis'', and '' Yersinia pestis''. They pose significant challenges in the medical field due to their outer membrane, which acts as a protective barrier against numerous antibiotics (including penicillin), detergents that would normally damage the inner cell membrane, and the antimicrobial enzyme lysozyme produced by animals as part of their innate immune system. Furthe ...
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Xanthobacter Viscosus
''Xanthobacter viscosus'' is a bacterium from the family of Xanthobacteraceae which has been isolated from activated sludge in Russia.Deutsche Sammlung von Mikroorganismen und Zellkulturen The Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures GmbH (German: ''Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH''), located in Braunschweig, is a research infrastructure in the ...br>/ref> References Further reading * External linksType strain of ''Xanthobacter viscosus'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Hyphomicrobiales Bacteria described in 2003 {{Hyphomicrobiales-stub ...
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Xanthobacter Tagetidis
''Xanthobacter tagetidis'' is a bacterium from the family of Xanthobacteraceae which has been isolated from soil from Root balls around the plant Tagetes patula in the United Kingdom.Deutsche Sammlung von Mikroorganismen und Zellkulturenbr>/ref> ''Xanthobacter tagetidis'' has the ability to grow on substituted thiophenes Thiophene is a heterocyclic compound with the formula C4H4S. Consisting of a planar five-membered ring, it is aromaticity, aromatic as indicated by its extensive substitution reactions. It is a colorless liquid with a benzene-like odor. In most .... References Further reading * * * External linksType strain of ''Xanthobacter tagetidis'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Hyphomicrobiales Bacteria described in 1997 {{Hyphomicrobiales-stub ...
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Xanthobacter Oligotrophicus
''Xanthobacter'' is a genus of Gram-negative bacteria from the family Xanthobacteraceae. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclatu ... (LPSN). The phylogeny is based on whole-genome analysis. References Hyphomicrobiales Bacteria genera {{Hyphomicrobiales-stub ...
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Pseudomonadota
Pseudomonadota (synonym "Proteobacteria") is a major phylum of gram-negative bacteria. Currently, they are considered the predominant phylum within the domain of bacteria. They are naturally found as pathogenic and free-living (non- parasitic) genera. The phylum comprises six classes ''Acidithiobacillia, Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria, Hydrogenophilia'', and '' Zetaproteobacteria.'' The Pseudomonadota are widely diverse, with differences in morphology, metabolic processes, relevance to humans, and ecological influence. Classification American microbiologist Carl Woese established this grouping in 1987, calling it informally the "purple bacteria and their relatives". The group was later formally named the 'Proteobacteria' after the Greek god Proteus, who was known to assume many forms. In 2021 the International Committee on Systematics of Prokaryotes designated the synonym Pseudomonadota, and renamed many other prokaryotic phyla as well. Th ...
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Xanthobacter Autotrophicus
''Xanthobacter autotrophicus'' is a Gram-negative, aerobic, pleomorphic and nitrogen-fixing bacterium from the family of Xanthobacteraceae which has been isolated from black pool sludge in Germany.Deutsche Sammlung von Mikroorganismen und Zellkulturenbr>/ref> ''Xanthobacter autotrophicus'' can utilize 1,2-dichloroethane, methanol and propane Propane () is a three-carbon chain alkane with the molecular formula . It is a gas at standard temperature and pressure, but becomes liquid when compressed for transportation and storage. A by-product of natural gas processing and petroleum ref .... Further reading * * * * * * * * * * * * References External linksType strain of ''Xanthobacter autotrophicus'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Hyphomicrobiales Bacteria described in 1978 {{Hyphomicrobiales-stub ...
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