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Sibernetic
Sibernetic is a fluid mechanics simulator developed for simulations of ''C. elegans'' in the OpenWorm OpenWorm is an international open science project for the purpose of simulating the roundworm ''Caenorhabditis elegans'' at the cellular level. Although the long-term goal is to model all 959 cells of the ''C. elegans'', the first stage is to mod ... project developed for the OpenWorm project by Andrey Palyanov, Sergey Khayrulin and Mike Vella as part of the OpenWorm team. Sibernetic provides an implementation of the PCISPH contractile matter algorithm for simulating muscle tissue and is applied to C. elegans locomotion. External links https://github.com/openworm/sibernetic Programming languages {{prog-lang-stub ...
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OpenWorm
OpenWorm is an international open science project for the purpose of simulating the roundworm ''Caenorhabditis elegans'' at the cellular level. Although the long-term goal is to model all 959 cells of the ''C. elegans'', the first stage is to model the worm's locomotion by simulating the 302 neurons and 95 muscle cells. This bottom up simulation is being pursued by the OpenWorm community. As of 2014, a physics engine called Sibernetic has been built for the project and models of the neural connectome and a muscle cell have been created in NeuroML format. A 3D model of the worm anatomy can be accessed through the web via the OpenWorm browser. The OpenWorm project is also contributing to develop Geppetto, a web-based multi-algorithm, multi-scale simulation platform engineered to support the simulation of the whole organism. __TOC__ Background: ''C. elegans'' The roundworm ''Caenorhabditis elegans'' is a free-living, transparent nematode, about 1 mm in length, that live ...
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