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Limnobacter Thiooxidans
''Limnobacter thiooxidans'' is a Gram-negative, thiosulfate-oxidizing bacterium with a single polar flagellum, from the genus ''Limnobacter'' and family Burkholderiaceae, isolated from sediment of the littoral zone from the Chiemsee Chiemsee () is a freshwater lake in Bavaria, Germany, near Rosenheim. It is often called "the Bavarian Sea". The rivers Tiroler Achen and Prien flow into the lake from the south, and the river Alz flows out towards the north. The Alz flows in ... in Germany.EzBioCloud http://eztaxon-e.ezbiocloud.net/ezt_hierarchy?m=nomen_view&nid=Limnobacter+thiooxidans References External linksType strain of ''Limnobacter thiooxidans'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Burkholderiaceae {{betaproteobacteria-stub ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic re ...
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Pseudomonadota
Pseudomonadota (synonym Proteobacteria) is a major phylum of Gram-negative bacteria. The renaming of phyla in 2021 remains controversial among microbiologists, many of whom continue to use the earlier names of long standing in the literature. The phylum Proteobacteria includes a wide variety of pathogenic genera, such as '' Escherichia'', '' Salmonella'', '' Vibrio'', '' Yersinia'', '' Legionella'', and many others.Slonczewski JL, Foster JW, Foster E. Microbiology: An Evolving Science 5th Ed. WW Norton & Company; 2020. Others are free-living (non parasitic) and include many of the bacteria responsible for nitrogen fixation. Carl Woese established this grouping in 1987, calling it informally the "purple bacteria and their relatives". Because of the great diversity of forms found in this group, it was later informally named Proteobacteria, after Proteus, a Greek god of the sea capable of assuming many different shapes (not after the Proteobacteria genus ''Proteus''). In 2021 the In ...
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Betaproteobacteria
Betaproteobacteria are a class of Gram-negative bacteria, and one of the eight classes of the phylum Pseudomonadota (synonym Proteobacteria). The ''Betaproteobacteria'' are a class comprising over 75 genera and 400 species of bacteria. Together, the ''Betaproteobacteria'' represent a broad variety of metabolic strategies and occupy diverse environments from obligate pathogens living within host organisms to oligotrophic groundwater ecosystems. Whilst most members of the ''Betaproteobacteria'' are heterotrophic, deriving both their carbon and electrons from organocarbon sources, some are photoheterotrophic, deriving energy from light and carbon from organocarbon sources. Other genera are autotrophic, deriving their carbon from bicarbonate or carbon dioxide and their electrons from reduced inorganic ions such as nitrite, ammonium, thiosulfate or sulfide — many of these chemolithoautotrophic. ''Betaproteobacteria'' are economically important, with roles in maintaining soil pH a ...
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Burkholderiales
The Burkholderiales are an order of Pseudomonadota.George M. Garrity: ''Bergey's Manual of Systematic Bacteriology''. 2. Auflage. Springer, New York, 2005, Vol. 2: ''The Proteobacteria Part C: The Alpha-, Beta-, Delta-, and Epsilonproteabacteria'' Like all Pseudomonadota, they are Gram-negative. They include several pathogenic bacteria, including species of ''Burkholderia'', '' Bordetella'', and ''Ralstonia''. They also include ''Oxalobacter'' and related genera, which are unusual in using oxalic acid as their source of carbon. Other well-studied genera include '' Alcaligenes'', ''Cupriavidus'', '' Achromobacter'', '' Comamonas'', ''Delftia'', '' Massilia'', ''Duganella'', ''Janthinobacterium'', '' Polynucleobacter'' (important freshwater bacterioplankton), non-pathogenic '' Paraburkholderia'', '' Caballeronia'', '' Polaromonas'', '' Thiomonas'', '' Collimonas'', '' Hydrogenophaga'', '' Sphaerotilus'', ''Variovorax'', ''Acidovorax'', '' Rubrivivax'' and '' Rhodoferax'' (both membe ...
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Burkholderiaceae
The Burkholderiaceae are a family of bacteria included in the order Burkholderiales.Garrity, George M.; Brenner, Don J.; Krieg, Noel R.; Staley, James T. (eds.) (2005). Bergey's Manual of Systematic Bacteriology, Volume Two: The Proteobacteria, Part C: The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. New York, New York: Springer. . It includes some pathogenic species, such as '' Burkholderia mallei'' ( glanders) and ''Burkholderia pseudomallei'' (melioidosis Melioidosis is an infectious disease caused by a gram-negative bacterium called '' Burkholderia pseudomallei''. Most people exposed to ''B. pseudomallei'' experience no symptoms; however, those who do experience symptoms have signs and symptoms ...). References External links J.P. Euzéby: List of Prokaryotic names with Standing in Nomenclature Burkholderiales Bacteria families {{betaproteobacteria-stub ...
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Limnobacter
Limnobacter is a genus of Gram-negative, non-spore-forming, aerobic, oxidase- and catalase-positive, motile bacteria with a single polar flagellum, of the family Burkholderiaceae and class Betaproteobacteria. ''Limnobacter'' species have the ability to oxidize thiosulfate Thiosulfate ( IUPAC-recommended spelling; sometimes thiosulphate in British English) is an oxyanion of sulfur with the chemical formula . Thiosulfate also refers to the compounds containing this anion, which are the salts of thiosulfuric acid, ....International Journal of Systematic and Evolutionary Microbiology http://ijs.sgmjournals.org/content/61/2/404.full#ref-16 References Burkholderiaceae Bacteria genera {{Betaproteobacteria-stub ...
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Gram-negative
Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. They are characterized by their cell envelopes, which are composed of a thin peptidoglycan cell wall sandwiched between an inner cytoplasmic cell membrane and a bacterial outer membrane. Gram-negative bacteria are found in virtually all environments on Earth that support life. The gram-negative bacteria include the model organism ''Escherichia coli'', as well as many pathogenic bacteria, such as '' Pseudomonas aeruginosa'', '' Chlamydia trachomatis'', and '' Yersinia pestis''. They are a significant medical challenge as their outer membrane protects them from many antibiotics (including penicillin), detergents that would normally damage the inner cell membrane, and lysozyme, an antimicrobial enzyme produced by animals that forms part of the innate immune system. Additionally, the outer leaflet of this membrane comprises a complex ...
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Thiosulfate
Thiosulfate ( IUPAC-recommended spelling; sometimes thiosulphate in British English) is an oxyanion of sulfur with the chemical formula . Thiosulfate also refers to the compounds containing this anion, which are the salts of thiosulfuric acid, e.g. sodium thiosulfate . Thiosulfate also refers to the esters of thiosulfuric acid, e.g. ''O'',''S''-dimethyl thiosulfate . The prefix thio- indicates that the thiosulfate is a sulfate with one oxygen replaced by sulfur. Thiosulfate is tetrahedral at the central S atom. Thiosulfate salts occur naturally. Thiosulfate ion has C3v symmetry, and is produced by certain biochemical processes. It rapidly dechlorinates water and is notable for its use to halt bleaching in the paper-making industry. Thiosulfate salts are mainly used in dying in textiles and the bleaching of natural substances. Sodium thiosulfate, commonly called ''hypo'' (from "hyposulfite"), was widely used in photography to fix black and white negatives and prints after the ...
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Bacterium
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic r ...
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Flagellum
A flagellum (; ) is a hairlike appendage that protrudes from certain plant and animal sperm cells, and from a wide range of microorganisms to provide motility. Many protists with flagella are termed as flagellates. A microorganism may have from one to many flagella. A gram-negative bacterium ''Helicobacter pylori'' for example uses its multiple flagella to propel itself through the mucus lining to reach the stomach epithelium, where it may cause a gastric ulcer to develop. In some bacteria the flagellum can also function as a sensory organelle, being sensitive to wetness outside the cell. Across the three domains of Bacteria, Archaea, and Eukaryota the flagellum has a different structure, protein composition, and mechanism of propulsion but shares the same function of providing motility. The Latin word means "whip" to describe its lash-like swimming motion. The flagellum in archaea is called the archaellum to note its difference from the bacterial flagellum. Eukary ...
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Littoral Zone
The littoral zone or nearshore is the part of a sea, lake, or river that is close to the shore. In coastal ecology, the littoral zone includes the intertidal zone extending from the high water mark (which is rarely inundated), to coastal areas that are permanently submerged — known as the ''foreshore'' — and the terms are often used interchangeably. However, the geographical meaning of ''littoral zone'' extends well beyond the intertidal zone to include all neritic waters within the bounds of continental shelves. Etymology The word ''littoral'' may be used both as a noun and as an adjective. It derives from the Latin noun ''litus, litoris'', meaning "shore". (The doubled ''t'' is a late-medieval innovation, and the word is sometimes seen in the more classical-looking spelling ''litoral''.) Description The term has no single definition. What is regarded as the full extent of the littoral zone, and the way the littoral zone is divided into subregions, varies in dif ...
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Chiemsee
Chiemsee () is a freshwater lake in Bavaria, Germany, near Rosenheim. It is often called "the Bavarian Sea". The rivers Tiroler Achen and Prien flow into the lake from the south, and the river Alz flows out towards the north. The Alz flows into the Inn which then merges with the Danube. The Chiemsee is divided into the bigger, north section, in the northeast, called , and the , in the southwest. The Chiemgau, the region surrounding the Chiemsee, is a popular recreation area. Origin The Chiemsee was formed, like many other pre-alpine lakes, at the end of the last ice age about 10,000 years ago from a hollow carved out by a glacier (a ). Originally the lake covered an area of almost , which is about three times its present area. Within 10,000 years its area had shrunk to around . Before 1904 the water level was lowered by about a metre. As a result, large areas of dry land were reclaimed. Islands There are three main islands on the lake: Herreninsel ("gentlemen's island ...
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