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Haplogroup S (Y-DNA)
Haplogroup S also known as S-B254 is a human human Y-chromosome DNA haplogroup, Y-DNA haplogroup, defined by the Single-nucleotide polymorphism, SNPs B254 and Z33355.International Society of Genetic Genealogy (ISOGG; 2017), ''Y-DNA Haplogroup Tree 2015''
(24 March 2017).
Until 2016, it was known as Haplogroup S1. S-M254 is the most common haplogroup among males in the New Guinea Highlands, Papua New Guinea Highlands. It is also relatively common in some parts of Oceania, Wallacea and among indigenous Australians. In a major correction to the phylogenetic tree during 2016, Haplogroup S-M230 was "demoted" from the position of basal (phylogenetics), basal clade S*, becoming S1a1b, while S-B254 was "promoted" in its place to the level of S*. It has two primary sub ...
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Oceania
Oceania ( , ) is a region, geographical region including Australasia, Melanesia, Micronesia, and Polynesia. Outside of the English-speaking world, Oceania is generally considered a continent, while Mainland Australia is regarded as its continental landmass. Spanning the Eastern Hemisphere, Eastern and Western Hemisphere, Western hemispheres, at the centre of the land and water hemispheres, water hemisphere, Oceania is estimated to have a land area of about and a population of around 46.3 million as of 2024. Oceania is the smallest continent in land area and the list of continents and continental subregions by population, second-least populated after Antarctica. Oceania has a diverse mix of economies from the developed country, highly developed and globally competitive market economy, financial markets of Australia, French Polynesia, Hawaii, New Caledonia, and New Zealand, which rank high in quality of life and Human Development Index, to the much least developed countries ...
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Haplogroup K2b1 (Y-DNA)
Haplogroup K2b1, known sometimes as haplogroup MS, is a human Y-DNA haplogroup, defined by SNPs P397 and P399. It has a complex, diverse and not-yet fully understood internal structure; its downstream descendants include the major haplogroups Haplogroup M (P256) and Haplogroup S (M230). It is not clear at present whether the basal paragroup K2b1* is carried by any living males. Individuals carrying subclades of K2b1 are found primarily among Papuan peoples, Micronesian peoples, indigenous Australians, and Polynesians. Structure K2b1 is a direct descendant of K2b – known previously as Haplogroup MPS. Its only primary branches are the major haplogroups S (B254), also known as K2b1a (and previously known as Haplogroup S1 or K2b1a4) and M (P256), also known as K2b1b (previously K2b1d). Distribution K2b1 is strongly associated with the indigenous peoples of Melanesia (especially the island of New Guinea) and Micronesia, and to a lesser extent Polynesia, where it is gen ...
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Haplogroup S1 (Y-DNA)
A haplotype is a group of alleles in an organism that are inherited together from a single parent, and a haplogroup (haploid from the , ''haploûs'', "onefold, simple" and ) is a group of similar haplotypes that share a common ancestor with a single-nucleotide polymorphism mutation. More specifically, a haplotype is a combination of alleles at different chromosomal regions that are closely linked and tend to be inherited together. As a haplogroup consists of similar haplotypes, it is usually possible to predict a haplogroup from haplotypes. Haplogroups pertain to a single line of descent. As such, membership of a haplogroup, by any individual, relies on a relatively small proportion of the genetic material possessed by that individual. Each haplogroup originates from, and remains part of, a preceding single haplogroup (or paragroup). As such, any related group of haplogroups may be precisely modelled as a nested hierarchy, in which each set (haplogroup) is also a subset of a sing ...
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Human Y-chromosome DNA Haplogroup
In human genetics, a human Y-chromosome DNA haplogroup is a haplogroup defined by specific mutations in the non-Genetic recombination, recombining portions of DNA on the male-specific Y chromosome (Y-DNA). Individuals within a haplogroup share similar numbers of short tandem repeats (STRs) and single-nucleotide polymorphisms (SNPs). The Y-chromosome accumulates approximately two mutations per generation, "one mutation in every 30 million base pairs" and Y-DNA haplogroups represent significant branches of the Y-chromosome phylogenetic tree, each characterized by hundreds or even thousands of unique mutations. The Y-chromosomal most recent common ancestor (Y-MRCA), often referred to as Y-chromosomal Adam, is the most recent common ancestor from whom all currently living humans are descended Patrilineality, patrilineally. Y-chromosomal Adam is estimated to have lived around 236,000 years ago in Africa. By examining other population bottlenecks, most Eurasian men trace their descent ...
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Single-nucleotide Polymorphism
In genetics and bioinformatics, a single-nucleotide polymorphism (SNP ; plural SNPs ) is a germline substitution of a single nucleotide at a specific position in the genome. Although certain definitions require the substitution to be present in a sufficiently large fraction of the population (e.g. 1% or more), many publications do not apply such a frequency threshold. For example, a Guanine, G nucleotide present at a specific location in a reference genome may be replaced by an Adenine, A in a minority of individuals. The two possible nucleotide variations of this SNP – G or A – are called alleles. SNPs can help explain differences in susceptibility to a wide range of diseases across a population. For example, a common SNP in the Factor H, CFH gene is associated with increased risk of age-related macular degeneration. Differences in the severity of an illness or response to treatments may also be manifestations of genetic variations caused by SNPs. For example, two ...
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New Guinea Highlands
The New Guinea Highlands, also known as the Central Range or Central Cordillera, is a long chain of mountain ranges on the island of New Guinea, including the island's highest peak, Puncak Jaya, Indonesia, , the highest mountain in Oceania. The range is home to many intermountain river valleys, many of which support thriving agricultural communities. The highlands run generally east-west the length of the island, which is divided politically between Indonesia in the west and Papua New Guinea in the east. These mountains stretch from the Weyland Mountains starting in Wondama Bay Regency in the west to the Milne Bay Province in the east. Geography The Central Cordillera, some peaks of which are capped with ice, consists of (from east to west): the Central Highlands and Eastern Highlands of Papua New Guinea including the Owen Stanley Range in the southeast, whose highest peak is Mount Victoria at 4,038 metres (13,248 feet), the Albert Victor Mountains, the Sir Arthur Gordon Rang ...
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Wallacea
Wallacea is a biogeography, biogeographical designation for a group of mainly list of islands of Indonesia, Indonesian islands separated by deep-water straits from the Asian and Australia (continent), Australian continental shelf, continental shelves. Wallacea includes Sulawesi, the largest island in the group, as well as Lombok, Sumbawa, Flores, Sumba, Timor, Halmahera, Buru, Seram Island, Seram, and many smaller islands. The islands of Wallacea lie between the Sunda Shelf (the Malay Peninsula, Sumatra, Borneo, Java (island), Java, and Bali) to the west, and the Sahul Shelf including Australia and New Guinea to the south and east. The total land area of Wallacea is . Geography Wallacea is defined as the series of islands stretching between the two continental shelves of Sunda Shelf, Sunda and Sahul Shelf, Sahul, but excluding the Philippines. Its eastern border (separating Wallacea from Sahul) is represented by a zoogeography, zoogeographical boundary known as Richard Lydekker ...
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Indigenous Australians
Indigenous Australians are people with familial heritage from, or recognised membership of, the various ethnic groups living within the territory of contemporary Australia prior to History of Australia (1788–1850), British colonisation. They consist of two distinct groups, which include many ethnic groups: the Aboriginal Australians of the mainland and many islands, including Aboriginal Tasmanians, Tasmania, and the Torres Strait Islanders of the seas between Queensland and Papua New Guinea, located in Melanesia. 812,728 people Aboriginality, self-identified as being of Aboriginal and/or Torres Strait Islander origin in the 2021 Australian Census, representing 3.2% of the total population of Australia. Of these Indigenous Australians, 91.4% identified as Aboriginal, 4.2% identified as Torres Strait Islander, and 4.4% identified with both groups. The term Aboriginal and Torres Strait Islander peoples or the person's specific cultural group, is often preferred, though the term ...
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Haplogroup S-M230
Haplogroup S-M230, also known as S1a1b (and previously as S* or K2b1a4), is a Y-chromosome DNA haplogroup. It is by far the most numerically significant subclade of Haplogroup S1a (and its sole primary subclade, Haplogroup S-P405). S-M230 is commonly found among populations of the highlands of Papua New Guinea . It is also found at lower frequencies in adjacent parts of Indonesia and Melanesia. ( ) Origin Haplogroup S-M230 is thought to have evolved somewhere between 28,000-41,000 years ago. Portions of Northern Melanesia were settled by modern humans at least 42,000 years before present; early populations of Melanesia were hunter-gatherers and introduction of plants from New Zealand suggests outside contact. Distribution One study has reported finding haplogroup S-M230 in: 52% (16/31) of a sample from the Papua New Guinea (PNG) Highlands; 21% (7/34) of a sample from the Moluccas; 16% (5/31) of a sample from the Papua New Guinea coast; 12.5% (2/16) of a sample of Tolai from ...
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Basal (phylogenetics)
In phylogenetics, basal is the direction of the ''base'' (or root) of a phylogenetic tree#Rooted tree, rooted phylogenetic tree or cladogram. The term may be more strictly applied only to nodes adjacent to the root, or more loosely applied to nodes regarded as being close to the root. Note that extant taxa that lie on branches connecting directly to the root are not more closely related to the root than any other extant taxa. While there must always be two or more equally "basal" clades sprouting from the root of every cladogram, those clades may differ widely in taxonomic rank, Phylogenetic diversity, species diversity, or both. If ''C'' is a basal clade within ''D'' that has the lowest rank of all basal clades within ''D'', ''C'' may be described as ''the'' basal taxon of that rank within ''D''. The concept of a 'key innovation' implies some degree of correlation between evolutionary innovation and cladogenesis, diversification. However, such a correlation does not make a given ca ...
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