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Fidelibacterota
Fidelibacterota is a phylum of ''incertae sedis'' bacteria, previously known as "''Candidatus'' Marinimicrobia". The only species classified therein is ''Fidelibacter multiformis''. They have been found mainly at great depths such as the Challenger Deep, the Mariana Trench, and the Puerto Rico Trench. This phylum has a low representation in shallow pelagic samples and high abundance in deep samples. Although these bacteria are often associated with low dissolved oxygen environments, very little is known about their ecology and metabolic functions.Tarn, J., Peoples, L. M., Hardy, K., Cameron, J., & Bartlett, D. H. (2016)Identification of Free-Living and Particle-Associated Microbial Communities Present in Hadal Regions of the Mariana Trench Frontiers in microbiology, 7. Fidelibacterota is one of the two valid bacterial phyla that does not belong to any kingdom, the other being Vulcanimicrobiota Vulcanimicrobiota is a monotypic phylum of ''incertae sedis'' bacteria. It has one va ...
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Vulcanimicrobiota
Vulcanimicrobiota is a monotypic phylum of ''incertae sedis'' bacteria. It has one valid class Class, Classes, or The Class may refer to: Common uses not otherwise categorized * Class (biology), a taxonomic rank * Class (knowledge representation), a collection of individuals or objects * Class (philosophy), an analytical concept used d ... Vulcanimicrobiia. Vulcanimicrobiota is one of the two valid bacterial phyla that does not belong to any kingdom, the other being Fidelibacterota.Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. (2020)List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ ''International Journal of Systematic and Evolutionary Microbiology'', 70, 5607-5612; DOI: 10.1099/ijsem.0.004332 References Monotypic bacteria taxa Bacteria phyla Bacteria stubs {{Bacteria-stub ...
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Bacteria
Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of Prokaryote, prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit the air, soil, water, Hot spring, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria play a vital role in many stages of the nutrient cycle by recycling nutrients and the nitrogen fixation, fixation of nitrogen from the Earth's atmosphere, atmosphere. The nutrient cycle includes the decomposition of cadaver, dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, suc ...
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Bacteria Phyla
Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit the air, soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria play a vital role in many stages of the nutrient cycle by recycling nutrients and the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in mutualistic, commensal and para ...
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Phylum
In biology, a phylum (; : phyla) is a level of classification, or taxonomic rank, that is below Kingdom (biology), kingdom and above Class (biology), class. Traditionally, in botany the term division (taxonomy), division has been used instead of phylum, although the International Code of Nomenclature for algae, fungi, and plants accepts the terms as equivalent. Depending on definitions, the animal kingdom Animalia contains about 31 phyla, the plant kingdom Plantae contains about 14 phyla, and the fungus kingdom Fungi contains about eight phyla. Current research in phylogenetics is uncovering the relationships among phyla within larger clades like Ecdysozoa and Embryophyta. General description The term phylum was coined in 1866 by Ernst Haeckel from the Greek (, "race, stock"), related to (, "tribe, clan"). Haeckel noted that species constantly evolved into new species that seemed to retain few consistent features among themselves and therefore few features that distinguishe ...
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Incertae Sedis
or is a term used for a taxonomy (biology), taxonomic group where its broader relationships are unknown or undefined. Alternatively, such groups are frequently referred to as "enigmatic taxa". In the system of open nomenclature, uncertainty at specific taxonomic levels is indicated by (of uncertain family), (of uncertain suborder), (of uncertain order) and similar terms. Examples * The fossil plant ''Paradinandra, Paradinandra suecica'' could not be assigned to any family, but was placed ''incertae sedis'' within the order Ericales when described in 2001. * The fossil ''Gluteus minimus (fossil), Gluteus minimus'', described in 1975, could not be assigned to any known animal phylum. The genus is therefore ''incertae sedis'' within the kingdom Animalia. * While it was unclear to which order the New World vultures (family Cathartidae) should be assigned, they were placed in Aves ''incertae sedis''. It was later agreed to place them in a separate order, Cathartiformes. * Boc ...
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Species
A species () is often defined as the largest group of organisms in which any two individuals of the appropriate sexes or mating types can produce fertile offspring, typically by sexual reproduction. It is the basic unit of Taxonomy (biology), classification and a taxonomic rank of an organism, as well as a unit of biodiversity. Other ways of defining species include their karyotype, DNA sequence, morphology (biology), morphology, behaviour, or ecological niche. In addition, palaeontologists use the concept of the chronospecies since fossil reproduction cannot be examined. The most recent rigorous estimate for the total number of species of eukaryotes is between 8 and 8.7 million. About 14% of these had been described by 2011. All species (except viruses) are given a binomial nomenclature, two-part name, a "binomen". The first part of a binomen is the name of a genus to which the species belongs. The second part is called the specific name (zoology), specific name or the specific ...
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Challenger Deep
The Challenger Deep is the List of submarine topographical features#List of oceanic trenches, deepest known point of the seabed of Earth, located in the western Pacific Ocean at the southern end of the Mariana Trench, in the ocean territory of the Federated States of Micronesia. The General Bathymetric Chart of the Oceans, GEBCO Gazetteer of Undersea Feature Names indicates that the feature is situated at and has an approximated maximum depth of below sea level. A subsequent study revised the value to at a 95% confidence interval. However, both the precise geographic location and depth remain ambiguous, with contemporary measurements ranging from . The depression is named after the British Royal Navy survey ships , whose Challenger expedition, expedition of 1872–1876 first located it, and HMS Challenger (1931), HMS ''Challenger II'', whose expedition of 1950–1952 established its record-setting depth. The first descent by any vehicle was conducted by the United States N ...
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Mariana Trench
The Mariana Trench is an oceanic trench located in the western Pacific Ocean, about east of the Mariana Islands; it is the deep sea, deepest oceanic trench on Earth. It is crescent-shaped and measures about in length and in width. The maximum known depth is at the southern end of a small slot-shaped valley in its floor known as the Challenger Deep. The deepest point of the trench is more than farther from sea level than the peak of Mount Everest. At the bottom of the trench, the water column above exerts a pressure of , more than 1,071 times the standard atmospheric pressure at sea level. At this pressure, the density of water is increased by 4.96%. The temperature at the bottom is . In 2009, the Mariana Trench was established as a National monument (United States), US National Monument, Mariana Trench Marine National Monument. One-celled organisms called monothalamea have been found in the trench at a record depth of below the sea surface by researchers from the Scrip ...
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Puerto Rico Trench
The Puerto Rico Trench is located on the boundary between the North Atlantic Ocean and Caribbean Sea, parallel to and north of Puerto Rico, where the oceanic trench reaches the deepest points in the Atlantic Ocean. The trench is associated with a complex transition from the Lesser Antilles frontal subduction zone between the South American plate and Caribbean plate to the oblique subduction zone and the strike-slip transform fault zone between the North American plate and Caribbean plate, which extends from the Puerto Rico Trench at the Puerto Rico–Virgin Islands microplate through the Cayman Trough at the Gonâve microplate to the Middle America Trench at the Cocos plate. Constituting the deepest points in the Atlantic Ocean, the trench is long and has a maximum documented depth between and . The deepest point is commonly referred to as the Milwaukee Deep, with the Brownson Deep naming the seabed surrounding it. However, more recently, the latter term has also ...
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Oxygen
Oxygen is a chemical element; it has chemical symbol, symbol O and atomic number 8. It is a member of the chalcogen group (periodic table), group in the periodic table, a highly reactivity (chemistry), reactive nonmetal (chemistry), nonmetal, and a potent oxidizing agent that readily forms oxides with most elements as well as with other chemical compound, compounds. Oxygen is abundance of elements in Earth's crust, the most abundant element in Earth's crust, making up almost half of the Earth's crust in the form of various oxides such as water, carbon dioxide, iron oxides and silicates.Atkins, P.; Jones, L.; Laverman, L. (2016).''Chemical Principles'', 7th edition. Freeman. It is abundance of chemical elements, the third-most abundant element in the universe after hydrogen and helium. At standard temperature and pressure, two oxygen atoms will chemical bond, bind covalent bond, covalently to form dioxygen, a colorless and odorless diatomic gas with the chemical formula ...
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Ecology
Ecology () is the natural science of the relationships among living organisms and their Natural environment, environment. Ecology considers organisms at the individual, population, community (ecology), community, ecosystem, and biosphere levels. Ecology overlaps with the closely related sciences of biogeography, evolutionary biology, genetics, ethology, and natural history. Ecology is a branch of biology, and is the study of abundance (ecology), abundance, biomass (ecology), biomass, and distribution of organisms in the context of the environment. It encompasses life processes, interactions, and adaptations; movement of materials and energy through living communities; ecological succession, successional development of ecosystems; cooperation, competition, and predation within and between species; and patterns of biodiversity and its effect on ecosystem processes. Ecology has practical applications in fields such as conservation biology, wetland management, natural resource m ...
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Kingdom (biology)
In biology, a kingdom is the second highest taxonomic rank, just below domain. Kingdoms are divided into smaller groups called phyla (singular phylum). Traditionally, textbooks from Canada and the United States have used a system of six kingdoms (Animalia, Plantae, Fungi, Protista, Archaea/Archaebacteria, and Bacteria or Eubacteria), while textbooks in other parts of the world, such as Bangladesh, Brazil, Greece, India, Pakistan, Spain, and the United Kingdom have used five kingdoms (Animalia, Plantae, Fungi, Protista and Monera). Some recent classifications based on modern cladistics have explicitly abandoned the term ''kingdom'', noting that some traditional kingdoms are not monophyletic, meaning that they do not consist of all the descendants of a common ancestor. The terms ''flora'' (for plants), ''fauna'' (for animals), and, in the 21st century, '' funga'' (for fungi) are also used for life present in a particular region or time. Definition and associated terms Whe ...
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