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Duganella Sacchari
''Duganella sacchari'' is a bacterium of the genus ''Duganella'' in the Oxalobacteraceae family which was isolated with '' Duganella radicis'' from the rhizosphere of field-grown sugarcane Sugarcane or sugar cane is a species of (often hybrid) tall, Perennial plant, perennial grass (in the genus ''Saccharum'', tribe Andropogoneae) that is used for sugar Sugar industry, production. The plants are 2–6 m (6–20 ft) tall with .... References External linksType strain of ''Duganella sacchari'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Burkholderiales {{Betaproteobacteria-stub ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic re ...
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Pseudomonadota
Pseudomonadota (synonym Proteobacteria) is a major phylum of Gram-negative bacteria. The renaming of phyla in 2021 remains controversial among microbiologists, many of whom continue to use the earlier names of long standing in the literature. The phylum Proteobacteria includes a wide variety of pathogenic genera, such as '' Escherichia'', '' Salmonella'', '' Vibrio'', '' Yersinia'', '' Legionella'', and many others.Slonczewski JL, Foster JW, Foster E. Microbiology: An Evolving Science 5th Ed. WW Norton & Company; 2020. Others are free-living (non parasitic) and include many of the bacteria responsible for nitrogen fixation. Carl Woese established this grouping in 1987, calling it informally the "purple bacteria and their relatives". Because of the great diversity of forms found in this group, it was later informally named Proteobacteria, after Proteus, a Greek god of the sea capable of assuming many different shapes (not after the Proteobacteria genus ''Proteus''). In 2021 the In ...
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Betaproteobacteria
Betaproteobacteria are a class of Gram-negative bacteria, and one of the eight classes of the phylum Pseudomonadota (synonym Proteobacteria). The ''Betaproteobacteria'' are a class comprising over 75 genera and 400 species of bacteria. Together, the ''Betaproteobacteria'' represent a broad variety of metabolic strategies and occupy diverse environments from obligate pathogens living within host organisms to oligotrophic groundwater ecosystems. Whilst most members of the ''Betaproteobacteria'' are heterotrophic, deriving both their carbon and electrons from organocarbon sources, some are photoheterotrophic, deriving energy from light and carbon from organocarbon sources. Other genera are autotrophic, deriving their carbon from bicarbonate or carbon dioxide and their electrons from reduced inorganic ions such as nitrite, ammonium, thiosulfate or sulfide — many of these chemolithoautotrophic. ''Betaproteobacteria'' are economically important, with roles in maintaining soil pH a ...
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Burkholderiales
The Burkholderiales are an order of Pseudomonadota.George M. Garrity: ''Bergey's Manual of Systematic Bacteriology''. 2. Auflage. Springer, New York, 2005, Vol. 2: ''The Proteobacteria Part C: The Alpha-, Beta-, Delta-, and Epsilonproteabacteria'' Like all Pseudomonadota, they are Gram-negative. They include several pathogenic bacteria, including species of ''Burkholderia'', '' Bordetella'', and ''Ralstonia''. They also include ''Oxalobacter'' and related genera, which are unusual in using oxalic acid as their source of carbon. Other well-studied genera include '' Alcaligenes'', ''Cupriavidus'', '' Achromobacter'', '' Comamonas'', ''Delftia'', '' Massilia'', ''Duganella'', ''Janthinobacterium'', '' Polynucleobacter'' (important freshwater bacterioplankton), non-pathogenic '' Paraburkholderia'', '' Caballeronia'', '' Polaromonas'', '' Thiomonas'', '' Collimonas'', '' Hydrogenophaga'', '' Sphaerotilus'', ''Variovorax'', ''Acidovorax'', '' Rubrivivax'' and '' Rhodoferax'' (both membe ...
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Oxalobacteraceae
The Oxalobacteraceae are a family of bacteria, included in the order Burkholderiales. Like all Pseudomonadota, Oxalobacteraceae are Gram-negative. The family includes strict aerobes, strict anaerobes, and nitrogen-fixing Nitrogen fixation is a chemical process by which molecular nitrogen (), with a strong triple covalent bond, in the air is converted into ammonia () or related nitrogenous compounds, typically in soil or aquatic systems but also in industry. At ... (diazotrophic) members. The cells are curved, vibroid, or straight rod-shaped.Garrity, George M.; Brenner, Don J.; Krieg, Noel R.; Staley, James T. (eds.) (2005). Bergey's Manual of Systematic Bacteriology, Volume Two: The Proteobacteria, Part C: The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. New York, New York: Springer. pp. 354–361. . References Burkholderiales Bacteria families {{betaproteobacteria-stub ...
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Duganella
''Duganella'' is a genus of bacteria in the Oxalobacteraceae The Oxalobacteraceae are a family of bacteria, included in the order Burkholderiales. Like all Pseudomonadota, Oxalobacteraceae are Gram-negative. The family includes strict aerobes, strict anaerobes, and nitrogen-fixing Nitrogen fixation is a ... family. ''Duganella'' is named after the American microbiologist, P.R. Dugan, who first isolated the organism from sewage and polluted water. ''Duganella'' is in class Betaproteobacteria and order Burkholderiales. The molecular percent of Duganella's G/C content is 63–64. Morphological characteristics consist of: straight or slightly curved rods, and in liquid growth media, either colonies that are “occasionally fingerlike,” appear, or dispersed growth with little or no formation of colonies appear. When grown on nutrient agar, the colonies are pale yellow to “straw-colored.” ''Duganella'' is able to produce violacein, a vibrant purple compound derived from the ...
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Bacterium
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic r ...
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Genus
Genus ( plural genera ) is a taxonomic rank used in the biological classification of living and fossil organisms as well as viruses. In the hierarchy of biological classification, genus comes above species and below family. In binomial nomenclature, the genus name forms the first part of the binomial species name for each species within the genus. :E.g. '' Panthera leo'' (lion) and '' Panthera onca'' (jaguar) are two species within the genus ''Panthera''. ''Panthera'' is a genus within the family Felidae. The composition of a genus is determined by taxonomists. The standards for genus classification are not strictly codified, so different authorities often produce different classifications for genera. There are some general practices used, however, including the idea that a newly defined genus should fulfill these three criteria to be descriptively useful: # monophyly – all descendants of an ancestral taxon are grouped together (i.e. phylogenetic analysis should c ...
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Duganella Radicis
''Duganella radicis'' is a bacterium from the genus ''Duganella'' in the Oxalobacteraceae family which was isolated with ''Duganella sacchari'' from the rhizosphere of field-grown sugarcane Sugarcane or sugar cane is a species of (often hybrid) tall, Perennial plant, perennial grass (in the genus ''Saccharum'', tribe Andropogoneae) that is used for sugar Sugar industry, production. The plants are 2–6 m (6–20 ft) tall with .... References External linksType strain of ''Duganella radicis'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Burkholderiales Bacteria described in 2013 {{Betaproteobacteria-stub ...
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Rhizosphere
The rhizosphere is the narrow region of soil or substrate that is directly influenced by root secretions and associated soil microorganisms known as the root microbiome. Soil pores in the rhizosphere can contain many bacteria and other microorganisms that feed on sloughed-off plant cells, termed ''rhizodeposition'', and the proteins and sugars released by roots, termed root exudates. This symbiosis leads to more complex interactions, influencing plant growth and competition for resources. Much of the nutrient cycling and disease suppression by antibiotics required by plants, occurs immediately adjacent to roots due to root exudates and metabolic products of symbiotic and pathogenic communities of microorganisms. The rhizosphere also provides space to produce allelochemicals to control neighbours and relatives. The ''rhizoplane'' refers to the root surface including its associated soil particles which closely interact with each other. The plant-soil feedback loop and other ...
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Sugarcane
Sugarcane or sugar cane is a species of (often hybrid) tall, perennial grass (in the genus ''Saccharum'', tribe Andropogoneae) that is used for sugar production. The plants are 2–6 m (6–20 ft) tall with stout, jointed, fibrous stalks that are rich in sucrose, which accumulates in the stalk internodes. Sugarcanes belong to the grass family, Poaceae, an economically important flowering plant family that includes maize, wheat, rice, and sorghum, and many forage crops. It is native to the warm temperate and tropical regions of India, Southeast Asia, and New Guinea. The plant is also grown for biofuel production, especially in Brazil, as the canes can be used directly to produce ethyl alcohol (ethanol). Grown in tropical and subtropical regions, sugarcane is the world's largest crop by production quantity, totaling 1.9 billion tonnes in 2020, with Brazil accounting for 40% of the world total. Sugarcane accounts for 79% of sugar produced globally (most of the rest is ma ...
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