This list of sequenced fungi genomes contains all the fungal species known to have publicly available complete genome sequences that have been assembled, annotated and published; draft genomes are not included, nor are organelle only sequences.
Ascomycota
Dothideomycetes
* ''
Aureobasidium pullulans
''Aureobasidium pullulans'' is a ubiquitous and generalistic black, yeast-like fungus that can be found in different environments (e.g. soil, water, air and limestone). It is well known as a naturally occurring epiphyte or endophyte of a wide ra ...
'', ''
A. melanogenum'', ''
A. subglaciale ''and
''A.'' ''namibiae'''', polyextremotolerant'' (2014)
* ''
Hortaea werneckii'', extremely halotolerant (2013
2017)
* ''
Leptosphaeria maculans
''Leptosphaeria maculans'' (anamorph ''Phoma lingam'') is a fungal pathogen of the phylum Ascomycota that is the causal agent of blackleg disease on ''Brassica'' crops. Its genome has been sequenced, and ''L. maculans'' is a well-studied model ph ...
'', plant pathogen (2011
)
* ''
Macrophomina phaseolina
''Macrophomina phaseolina'' is a Botryosphaeriaceae plant pathogen fungus that causes damping off, seedling blight, collar rot, stem rot, charcoal rot, basal stem rot, and root rot on many plant species.
Hosts, symptoms, and signs
One of the ...
'', plant pathogen (2012
)
* ''
Mycosphaerella fijiensis'', plant pathogen (2007
)
* ''
Mycosphaerella graminicola
''Zymoseptoria tritici'', synonyms ''Septoria tritici'', ''Mycosphaerella graminicola'', is a species of filamentous fungus, an ascomycete in the family ''Mycosphaerellaceae''. It is a wheat plant pathogen causing septoria leaf blotch that is d ...
'' IPO323, wheat pathogen (2008
)
* ''
Phaeosphaeria nodorum
''Phaeosphaeria nodorum'' (syn. ''Stagonospora nodorum'', synonym and correct taxonomic name: ''Parastagonospora nodorum'') is a major fungal pathogen of wheat ('' Triticum aestivum''), causing the disease Septoria nodorum blotch. It is a member ...
'' SN15, wheat pathogen (2005
)
* ''
Pyrenophora tritici-repentis'' Pt-1C-BFP, wheat pathogen (2007
)
Eurotiomycetes
Eurotiomycetes is a large class of ascomycetes with cleistothecial ascocarps within the subphylum Pezizomycotina, currently containing around 3810 species according to the Catalogue of Life. It is the third largest lichenized class, with more tha ...
* ''
Ajellomyces capsulata''
several strains, Darling's disease (2009, unpubl.
)
* ''
Ajellomyces dermatitidis''
several strains (2009, unpubl.
)
* ''
Arthroderma benhamiae''
CBS 112371, skin infection (2010, unpubl.
)
* ''
Arthroderma gypseum''
CBS 118893, athlete's foot (2008
)
* ''
Arthroderma otae''
CBS 113480, athlete's foot (2008
)
* ''
Aspergillus aculeatus
''Aspergillus aculeatus'' is a fungus species in the genus ''Aspergillus''. It has been implicated as the causative agent in plant disease. ''A. aculeatus'' belongs to the group of black ''Aspergilli'' which are important industrial workhorses.P ...
'' ATCC16872, industrial use (2010
)
* ''
Aspergillus carbonarius'' ITEM 5010, food pathogen (2009
)
* ''
Aspergillus clavatus
''Aspergillus clavatus'' is a species of fungus in the genus ''Aspergillus'' with conidia dimensions 3–4.5 x 2.5–4.5 μm. It is found in soil and animal manure. The fungus was first described scientifically in 1834 by the French mycologist ...
'' Strain:NRRL1 (2008
)
* ''
Aspergillus fumigatus'' Strain:A1163, human pathogen (2008
)
* ''
Aspergillus fumigatus'' Strain:Af293, human pathogen (2005
)
* ''
Aspergillus kawachii'' IFO 4308, food industry (2011
)
* ''
Aspergillus nidulans
''Aspergillus nidulans'' (also called ''Emericella nidulans'' when referring to its sexual form, or teleomorph) is one of many species of filamentous fungi in the phylum Ascomycota. It has been an important research organism for studying eukaryo ...
'' Strain:FGSC A4, model organism (2005
)
* ''
Aspergillus niger
''Aspergillus niger'' is a mold classified within the ''Nigri'' section of the ''Aspergillus'' genus. The ''Aspergillus'' genus consists of common molds found throughout the environment within soil and water, on vegetation, in fecal matter, on de ...
'' Strain:ATCC 1015
DOE Joint Genome institute
* ''
Aspergillus niger
''Aspergillus niger'' is a mold classified within the ''Nigri'' section of the ''Aspergillus'' genus. The ''Aspergillus'' genus consists of common molds found throughout the environment within soil and water, on vegetation, in fecal matter, on de ...
'' Strain:CBS 513.88, industrial use (2007
)
* ''
Aspergillus oryzae'' Strain:RIB40, industrial use (2005
)
* ''
Aspergillus terreus
''Aspergillus terreus'', also known as ''Aspergillus terrestris'', is a fungus (mold) found worldwide in soil. Although thought to be strictly asexual until recently, ''A. terreus'' is now known to be capable of sexual reproduction. This saprotr ...
'' NIH 2624, statin producer and pathogen (2005, unpubl.
)
* ''
Coccidioides immitis
''Coccidioides immitis'' is a pathogenic fungus that resides in the soil in certain parts of the southwestern United States, northern Mexico, and a few other areas in the Western Hemisphere.
Epidemiology
''C. immitis'', along with its relati ...
'', human pathogen,
Valley fever (2009
)
* ''
Coccidioides posadasii
''Coccidioides posadasii'' is a pathogenic fungus that, along with ''Coccidioides immitis'', is the causative agent of coccidioidomycosis, or valley fever in humans. It resides in the soil in certain parts of the Southwestern United States, no ...
''
C735 delta SOWgp, human pathogen,
Valley fever (2009
)
* ''
Neosartorya fischeri'' Strain:NRRL181 (2008
)
* ''
Paracoccidioides brasiliensis
''Paracoccidioides brasiliensis'' is a dimorphic fungus and one of the two species that cause paracoccidioidomycosis (the other being '' Paracoccidioides lutzii).'' The fungus has been affiliated with the family Ajellomycetaceae (division Ascomyc ...
'', several strains, human pathogen (2007
* ''
Penicillium chrysogenum
''Penicillium chrysogenum'' (formerly known as ''Penicillium notatum'') is a species of fungus in the genus ''Penicillium''. It is common in temperate and subtropical regions and can be found on salted food products, but it is mostly found in in ...
'' Strain: Wisconsin54-1255, industrial use (2008
)
* ''
Penicillium digitatum
''Penicillium digitatum'' (/ˌpɛnɪˈsɪlɪəm/digitatum/) is a mesophilic fungus found in the soil of citrus-producing areas. It is a major source of post-harvest decay in fruits and is responsible for the widespread post-harvest disease in ''C ...
'' Strain PHI26 (2012
)
* ''
Penicillium digitatum
''Penicillium digitatum'' (/ˌpɛnɪˈsɪlɪəm/digitatum/) is a mesophilic fungus found in the soil of citrus-producing areas. It is a major source of post-harvest decay in fruits and is responsible for the widespread post-harvest disease in ''C ...
'' Strain Pd1 (2012
* ''
Talaromyces marneffei'', human pathogen (2011
* ''
Uncinocarpus reesii'' (2009
)
Leotiomycetes
The Leotiomycetes are a class of ascomycete fungi. Many of them cause serious plant diseases.
Systematics
The class Leotiomycetes contains numerous species with an anamorph placed within the ''fungi imperfecti'' (deuteromycota), that have onl ...
* ''
Blumeria graminis
''Blumeria graminis'' (commonly called barley powdery mildew or corn mildew) is a fungus that causes powdery mildew on grasses, including cereals. It is the only species in the genus ''Blumeria''. It has also been called ''Erysiphe graminis'' and ...
ffsp hordei'' Strain:DH14, plant pathogen (2010)
* ''
Botrytis cinerea
''Botrytis cinerea'' is a necrotrophic fungus that affects many plant species, although its most notable hosts may be wine grapes. In viticulture, it is commonly known as "botrytis bunch rot"; in horticulture, it is usually called "grey mould" o ...
'' (''Botryotinia fuckeliana'') Strain:B05.10 and T4, plant pathogen (2011
)
* ''
Glarea lozoyensis'' (2012
)
* ''
Sclerotinia sclerotiorum
''Sclerotinia sclerotiorum'' is a plant pathogenic fungus and can cause a disease called white mold if conditions are conducive. ''S. sclerotiorum'' can also be known as cottony rot, watery soft rot, stem rot, drop, crown rot and blossom blight. ...
'' Strain:1980 (2011
)
*''
Ascocoryne sarcoides
''Ascocoryne sarcoides'' is a species of fungus in the family Helotiaceae. The species name is derived from the Greek sarkodes (fleshy). Formerly known as ''Coryne sarcoides'', its taxonomical history has been complicated by the fact that it ma ...
'' Strain: NRRL50072 (2012
)
Pezizomycetes
*''
Cladobotryum protrusum'' (2019)
*''
Tuber melanosporum
''Tuber melanosporum'', called the black truffle, Périgord truffle or French black truffle, is a species of truffle native to Southern Europe. It is one of the most expensive edible mushrooms in the world.
Taxonomy
Italian naturalist Carlo V ...
''
Mel28, Périgord black truffle (2010
)
Saccharomycetes
Saccharomycetes belongs to the Ascomycota division of the kingdom Fungi. It is the only class in the subdivision Saccharomycotina, the budding yeasts. Saccharomycetes contains a single order, Saccharomycetales
Saccharomycetales belongs to the ...
* ''
Ashbya gossypii'' Strain:ATCC 10895, plant pathogen (2004
)
* ''
Candida albicans
''Candida albicans'' is an opportunistic pathogenic yeast that is a common member of the human gut flora. It can also survive outside the human body. It is detected in the gastrointestinal tract and mouth in 40–60% of healthy adults. It is usu ...
'' Strain:SC5314, human pathogen (2004)
* ''
Candida albicans
''Candida albicans'' is an opportunistic pathogenic yeast that is a common member of the human gut flora. It can also survive outside the human body. It is detected in the gastrointestinal tract and mouth in 40–60% of healthy adults. It is usu ...
'' Strain:WO-1, human pathogen (2009
)
* ''
Candida dubliniensis'' CD36, human pathogen (2009
)
* ''
Candida glabrata
''Candida glabrata'' is a species of haploid yeast of the genus ''Candida'', previously known as ''Torulopsis glabrata''. Despite the fact that no sexual life cycle has been documented for this species, ''C. glabrata'' strains of both mating ty ...
'' Strain:CBS138, human pathogen (2004
)
* ''
Candida guilliermondii
''Meyerozyma guilliermondii'' (formerly known as ''Pichia guilliermondii'' until its rename in 2010) is a species of yeast of the genus '' Meyerozyma'' whose asexual or anamorphic form is known as ''Candida guilliermondii''.
''Candida guillierm ...
'', human pathogen (2009
)
* ''
Candida lusitaniae'', human pathogen (2009
)
* ''
Candida parapsilosis
''Candida parapsilosis'' is a fungal species of yeast that has become a significant cause of sepsis and of wound and tissue infections in immunocompromised people. Unlike ''Candida albicans'' and '' Candida tropicalis'', ''C. parapsilosis'' is no ...
'', human pathogen (2009
)
* ''
Candida orthopsilosis'', human pathogen (2012
)
* ''
Candida tropicalis'', human pathogen (2009
)
* ''
Debaryomyces
''Debaryomyces'' is a genus of yeast
Yeasts are eukaryotic, single-celled microorganisms classified as members of the fungus kingdom. The first yeast originated hundreds of millions of years ago, and at least 1,500 species are currently r ...
hansenii'' Strain:CBS767, industrial use (2004
)
* ''
Debaryomyces
''Debaryomyces'' is a genus of yeast
Yeasts are eukaryotic, single-celled microorganisms classified as members of the fungus kingdom. The first yeast originated hundreds of millions of years ago, and at least 1,500 species are currently r ...
hansenii'' Strain:MTCC 234, salt-tolerant (2012
)
* ''
Dekkera bruxellensis'' Strain:CBS2499, wine yeast (2012
)
* ''
Hansenula polymorpha
''Ogataea polymorpha'' is a methylotrophic yeast with unusual characteristics. It is used as a protein factory for pharmaceuticals.
''Ogataea polymorpha'' belongs to a limited number of methylotrophic yeast species – yeasts that can grow on ...
'' NCYC 495 leu1.1, industrial use (2010
)
* ''
Kluyveromyces aestuarii''
ATCC 18862 (2010, unpubl.
)
* ''
Kluyveromyces lactis
''Kluyveromyces lactis'' is a '' Kluyveromyces'' yeast commonly used for genetic studies and industrial applications. Its name comes from the ability to assimilate lactose and convert it into lactic acid.
''Kluyveromyces lactis'' (formerly ''S ...
'' Strain:CLIB210, industrial use (2004
)
* ''
Kluyveromyces wickerhamii''
UCD 54-210 (2010, unpubl.
)
* ''
Lachancea kluyveri'' (''
Saccharomyces kluyveri'')
NRRL Y-12651, plant pathogen (2009
)
* ''
Lodderomyces elongisporus'', human pathogen (2009
)
* ''
Naumovozyma castellii'' Strain:AS 2.2404, CBS 4309 (''Saccharomyces castellii''; 2003,
2011
)
* ''
Naumovozyma dairenensis'' Strain:CBS 421 (2011
)
* ''
Saccharomyces bayanus'' (2003,
2011
)
* ''
Saccharomyces arboricolus'' (2013,
)
* ''
Saccharomyces cerevisiae
''Saccharomyces cerevisiae'' () (brewer's yeast or baker's yeast) is a species of yeast (single-celled fungus microorganisms). The species has been instrumental in winemaking, baking, and brewing since ancient times. It is believed to have b ...
'' Strain:JAY291, industrial/model (2009
)
* ''
Saccharomyces cerevisiae
''Saccharomyces cerevisiae'' () (brewer's yeast or baker's yeast) is a species of yeast (single-celled fungus microorganisms). The species has been instrumental in winemaking, baking, and brewing since ancient times. It is believed to have b ...
'' Strain:S288C, industrial/model (1996
)
* ''
Saccharomyces cerevisiae
''Saccharomyces cerevisiae'' () (brewer's yeast or baker's yeast) is a species of yeast (single-celled fungus microorganisms). The species has been instrumental in winemaking, baking, and brewing since ancient times. It is believed to have b ...
'' Strain:Sigma1278b, industrial/model (2010
)
* ''
Saccharomyces kudriavzevii'' (2003
)
* ''
Saccharomyces mikatae'' (2003,
2011
)
* ''
Saccharomyces paradoxus'' (2003
2009
)
* ''
Saccharomyces pastorianus
''Saccharomyces pastorianus'' is a yeast used industrially for the production of lager beer, and was named in honour of Louis Pasteur by the German Max Reess in 1870. This yeast's complicated genome appears to be the result of hybridisation bet ...
''
Weihenstephan 34/70, industrial, beer (2009
)
* ''
Scheffersomyces stipitis'' (''Pichia stipitis'') CBS 6054, lignin/xylose degrader (2007
)
* ''
Spathaspora passalidarum'' NRRL Y-27907, model xylose fermenter (2010
)
* ''
Tetrapisispora phaffii'' van der Walt Y 89, CBS 4417 (2011
)
* ''
Torulaspora delbrueckii'' Strain:Wallerstein 129, CBS 1146 (2011
)
* ''
Vanderwaltozyma polyspora''
DSM 70294 (2007
)
* ''
Yarrowia lipolytica'' Strain:CLIB99, industrial use (2004
)
* ''
Zygosaccharomyces
''Zygosaccharomyces'' is a genus of yeasts in the family Saccharomycetaceae. It was first described under the genus ''Saccharomyces'', but in 1983, it was reclassified to its current name in the work by Barnett ''et al''. The yeast has a long his ...
rouxii'' strain CBS732, food spoiler (2009
)
Schizosaccharomycetes
Schizosaccharomycetes is a class in the kingdom of fungi. It contains the order Schizosaccharomycetales, the fission yeasts. The genus Schizosaccharomycetes is a broad and ancient clade within Ascomycota including five known fission yeast:
'' ...
* ''
Schizosaccharomyces japonicus'' yFS275, model for invasive growth (2006
)
* ''
Schizosaccharomyces pombe
''Schizosaccharomyces pombe'', also called "fission yeast", is a species of yeast used in traditional brewing and as a model organism in molecular and cell biology. It is a unicellular eukaryote, whose cells are rod-shaped. Cells typically measur ...
'' Strain:972h, model eukaryote (2002
)
Sordariomycetes
Sordariomycetes is a class of fungi in the subdivision Pezizomycotina (Ascomycota), consisting of 28 orders, 90 families, 1344 genera. Sordariomycetes is from the Latin sordes (filth) because some species grow in animal feces, though growth habi ...
* ''
Colletotrichum graminicola'', corn pathogen (2012
)
* ''
Colletotrichum higginsianum'', ''Arabidopsis thaliana'' pathogen (2012
)
* ''
Chaetomium cochliodes'' Strain:CCM F-232, soil fungus (2016
)
* ''
Chaetomium globosum
''Chaetomium globosum'' is a well-known mesophilic member of the mold family Chaetomiaceae. It is a saprophytic fungus that primarily resides on plants, soil, straw, and dung. Endophytic ''C. globosum'' assists in cellulose decomposition of plant ...
'' Strain:CBS 148.51, soil fungus (2005
)
* ''
Chaetomium thermophilum'' Strain:CBS 144.50, soil fungus (2011
)
* ''
Fusarium oxysporum
''Fusarium oxysporum'' (Schlecht as emended by Snyder and Hansen), an ascomycete fungus, comprises all the species, varieties and forms recognized by Wollenweber and Reinking within an infrageneric grouping called section Elegans. It is part of ...
'' f. sp. lycopersici 4287, human/plant pathogen (2010
)
* ''
Gibberella moniliformis'' 7600, plant pathogen (2010
)
* ''
Gibberella zeae'' PH-1, plant pathogen (2008
)
* ''
Gaeumannomyces graminis tritici''
R3-111a-1 (2010, unpubl.
)
* ''
Grosmannia clavigera'' kw1407, plant pathogen (2011
)
* ''
Magnaporthe grisea'', plant pathogen (20054
)
* ''
Metarhizium acridum'' CQMa 102, and
* ''
Metarhizium anisopliae
''Metarhizium robertsii'' formerly known as ''M. anisopliae'', and even earlier as ''Entomophthora anisopliae'' (basionym) is a fungus that grows naturally in soils throughout the world and causes disease in various insects by acting as a paras ...
'' ARSEF 23, insect pathogens (2011
)
* ''
Neurospora crassa
''Neurospora crassa'' is a type of red bread mold of the phylum Ascomycota. The genus name, meaning "nerve spore" in Greek, refers to the characteristic striations on the spores. The first published account of this fungus was from an infestation ...
'', model eukaryote (2003
)
* ''
Neurospora tetrasperma'' FGSC 2508 mat A, model (2010
)
* ''
Nectria haematococca
''Fusarium solani'' is a species complex of at least 26 closely related filamentous fungi in the division Ascomycota, family Nectriaceae. It is the anamorph of '' Nectria haematococca''. It is a common soil fungus and colonist of plant mater ...
''
MPVI, plastic/pest./lignin degrader (2009
)
* ''
Podospora anserina''
:S mat+
* ''
Sporotrichum thermophile'', thermophilic cellulose degrader (2010
)
* ''
Thielavia terrestris'', model thermophile/industrial (2010
)
* ''
Trichoderma atroviride'', industrial/soil, (2010
)
* ''
Trichoderma reesei''
QM6a, biomass-degrading (2008
)
* ''
Trichoderma virens
''Trichoderma'' is a genus of fungi in the family Hypocreaceae that is present in all soils, where they are the most prevalent culturable fungi. Many species in this genus can be characterized as opportunistic avirulent plant symbionts. This re ...
'' Gv29-8, industrial/pathogen (2007
)
* ''
Verticillium albo-atrum
''Verticillium albo-atrum'' is a plant pathogen with many hosts.
Infected plants
See:
* List of potato diseases
* List of alfalfa diseases
* List of African daisy diseases
* List of beet diseases
* List of caneberries diseases
* List of tobac ...
'' VaMs.102, plant pathogen (2008, unpubl.
)
Basidiomycota
Agaricomycetes
* ''
Agaricus bisporus
''Agaricus bisporus'' is an edible basidiomycete mushroom native to grasslands in Eurasia and North America. It has two color states while immature – white and brown – both of which have various names, with additional names for the mature ...
var. bisporus'' Strain:H97, Champignon (2009
)
*''
Agrocybe aegerita
''Cyclocybe aegerita'', also called'' Agrocybe cylindracea'', ''Agrocybe aegerita'' or ''Pholiota aegerita'',Mariano García Rollán''Cultivo de setas y trufas'' pg. 167, MUNDI-PRENSA (2007), is a mushroom in the genus '' Cyclocybe'' which is c ...
,'' ack Poplar or Sword-belt Mushroom (2018) )
* ''
Auricularia delicata'' (2012
)
*''
Auricularia heimuer
''Auricularia heimuer'', also known as heimuer () or black wood ear, is a species of fungus in the order Auriculariales. It is commercially cultivated for food in China at a value exceeding $4 billion (USD) per year. The species was previously r ...
,'' Chinese Auricularia (2019)
* ''
Coniophora puteana'' (2012
)
* ''
Coprinopsis cinerea'' (''Coprinus cinereus''), model organism for multicellular fungi (2010
)
* ''
Dichomitus squalens'' (2012
)
* ''
Fibroporia radiculosa'' Strain:TFFH 294 (2012
)
* ''
Fomitiporia mediterranea'' (2012
)
* ''
Fomitopsis pinicola
''Fomitopsis pinicola'', is a stem decay fungus common on softwood and hardwood trees. Its conk (fruit body) is known as the red-belted conk. The species is common throughout temperate Europe and Asia. It is a decay fungus that serves as a s ...
'' (2012
)
* ''
Gloeophyllum trabeum'' (2012
)
* ''
Hebeloma cylindrosporum
''Hebeloma cylindrosporum'' is a species of mushroom-forming fungus
A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar ...
'' http://genome.jgi.doe.gov/Hebcy2/Hebcy2.home.html
* ''
Heterobasidion annosum'', plant pathogen (2009
)
* ''
Laccaria bicolor
''Laccaria bicolor'' is a small tan-colored mushroom with lilac gills. It is edible but not choice, and grows in mixed birch and pine woods. It is found in the temperate zones of the globe, in late summer and autumn. ''L. bicolor'' is an e ...
'' Strain:S238N-H82, mycorrhiza (2008
)
*
''Lentinula edode''s,
Shiitake
The shiitake (alternate form shitake) (; ''Lentinula edodes'') is an edible mushroom native to East Asia, which is now cultivated and consumed around the globe. It is considered a Medicinal fungi, medicinal mushroom in some forms of tradition ...
mushroom (2016)
* ''
Moniliophthora perniciosa
''Moniliophthora perniciosa'' (previously ''Crinipellis perniciosa'') is a fungus that causes " witches' broom disease" (WBD) of the cocoa tree ''T. cacao''. This pathogen is currently limited to South America, Panama and the Caribbean, and is p ...
'',
Witches' Broom Disease of
cacao (2008
)
* ''
Phanerochaete chrysosporium'' Strain:RP78,
mycoremediation
Mycoremediation (from ancient Greek ''μύκης (mukēs)'', meaning "fungus" and the suffix ''-remedium'', in Latin meaning 'restoring balance') is a form of bioremediation in which fungi-based remediation methods are used to decontaminate the e ...
(2004
)
* ''
Piriformospora indica'' endophyte (2011
)
* ''
Pleurotus ostreatus
''Pleurotus ostreatus'', the oyster mushroom, oyster fungus, or hiratake, is a common edible mushroom. It was first cultivated in Germany as a subsistence measure during World War I and is now grown commercially around the world for food. It is ...
'', industrial/lignin degrader (2010
)
*''
Pleurotus tuber-regium
''Pleurotus tuber-regium'', the king tuber mushroom, is an edible gilled fungus native to the tropics, including Africa, Asia, and Australasia. It has been shown to be a distinct species incapable of cross-breeding and phylogenetically removed f ...
,'' White-rot fungus (2018)
* ''
Postia placenta'', cellulose degrader (2008
)
* ''
Punctularia strigosozonata'' (2012
)
* ''
Schizophyllum commune
''Schizophyllum commune'' is a species of fungus in the genus ''Schizophyllum''. The mushroom resembles undulating waves of tightly packed corals or loose Chinese fan. "Gillies" or "split gills" vary from creamy yellow to pale white in colour. Th ...
'', mushroom (2010
)
* ''
Serpula lacrymans
''Serpula lacrymans'' is one of the fungi that cause damage to timber referred to as dry rot. It is a basidiomycete in the order Boletales. The ''Serpula lacrymans'' has the ability to rapidly colonise sites through unique and highly specialise ...
'', plant pathogen (2011
)
* ''
Stereum hirsutum
''Stereum hirsutum'', also called false turkey tail and hairy curtain crust, is a fungus typically forming multiple brackets on dead wood. It is also a plant pathogen infecting peach trees. ''S. hirsutum'' is in turn parasitised by certain other ...
'' (2012
)
* ''
Trametes versicolor
''Trametes versicolor''also known as ''Coriolus versicolor'' and ''Polyporus versicolor''is a common polypore mushroom found throughout the world. Meaning 'of several colors', ''versicolor'' reliably describes this fungus that displays a varie ...
'' (2012
)
* ''
Wolfiporia
''Wolfiporia'' is a genus of fungi in the family Polyporaceae. The genus was circumscribed by Leif Ryvarden and Robert Lee Gilbertson in 1984 to contain the type species ''Wolfiporia cocos'' (now known as '' Wolfiporia extensa'') and '' W. ...
cocos'' (2012
)
Pucciniomycetes (formerly
Urediniomycetes
The Pucciniomycetes (formerly known as the Urediniomycetes) are a class of fungi in the Pucciniomycotina subdivision of the Basidiomycota. The class contains 5 orders, 21 families, 190 genera, and 8016 species. It includes several important ...
)
* ''
Melampsora laricis-populina'', pathogen of poplars (2008
)
* ''
Puccinia graminis
Stem rust, also known as cereal rust, black rust, red rust or red dust, is caused by the fungus ''Puccinia graminis'', which causes significant disease in cereal crops. Crop species that are affected by the disease include bread wheat, durum ...
'' f. sp. tritici, plant pathogen (2011
)
* ''
Puccinia triticina
Wheat leaf rust (''Puccinia triticina'') is a fungal disease that affects wheat, barley, rye stems, leaves and grains. In temperate zones it is destructive on winter wheat because the pathogen overwinters. Infections can lead up to 20% yield ...
'' 1-1 BBBD Race 1, pathogen of wheat(
)
* ''
Rhodotorula
''Rhodotorula'' is a genus of pigmented yeasts, part of the division Basidiomycota. It is readily identifiable by distinctive orange/red colonies when grown on Sabouraud's dextrose agar (SDA). This distinctive color is the result of pigme ...
graminis'' strain WP1, plant symbiont (2010
)
* ''
Sporobolomyces
''Sporobolomyces'' is a fungal genus of uncertain familial placement in the order Sporidiobolales. Species in the genus are anamorphic yeasts. Teleomorphic forms are included in the genus ''Sporidiobolus''. Generic synonyms of ''Sporobolomyce ...
roseus'', associated with plants (
)
Tremellomycetes
* ''
Cryptococcus (Filobasidiella) neoformans'' JEC21, human pathogen (2005,
other strains unpubl.
)
* ''
Dacryopinax'' sp. (2012
)
* ''
Tremella mesenterica
''Tremella mesenterica'' (common names include yellow brain, golden jelly fungus, yellow trembler, and witches' butter) is a common jelly fungus in the family Tremellaceae of the Agaricomycotina. It is most frequently found on dead but attached ...
'' (2012
)
Ustilaginomycetes
Ustilaginomycetes is the class of true smut fungi. They are plant parasites with about 1400 recognised species in 70 genera. They have a simple septum with a septal pore cap, this is different from Agaricomycotina which has a dolipore septum with ...
* ''
Malassezia globosa'' CBS 7966, dandruff-associated (2007
)
* ''
Malassezia restricta'' CBS 7877, dandruff-associated (2007
)
* ''
Sporisorium rellianum'', plant pathogen (2010
)
* ''
Ustilago maydis
Corn smut is a plant disease caused by the pathogenic fungus ''Ustilago maydis'' that causes smut on maize and teosinte. The fungus forms galls on all above-ground parts of corn species. It is edible, and is known in Mexico as the delicacy ' ...
'', plant pathogen (2006
)
Wallemiomycetes
* ''
Wallemia ichthyophaga'', obligate
halophile
The halophiles, named after the Greek word for "salt-loving", are extremophiles that thrive in high salt concentrations. While most halophiles are classified into the domain Archaea, there are also bacterial halophiles and some eukaryotic species, ...
(2013
)
* ''
Wallemia sebi'', xerophile (2012
)
Chytridiomycota
Chytridiomycota are a division of zoosporic organisms in the kingdom Fungi, informally known as chytrids. The name is derived from the Ancient Greek ('), meaning "little pot", describing the structure containing unreleased zoöspores. Chytri ...
Chytridiomycota
Chytridiomycota are a division of zoosporic organisms in the kingdom Fungi, informally known as chytrids. The name is derived from the Ancient Greek ('), meaning "little pot", describing the structure containing unreleased zoöspores. Chytri ...
includes fungi with spores that have
flagella (
zoospores
A zoospore is a motile asexual spore that uses a flagellum for locomotion. Also called a swarm spore, these spores are created by some protists, bacteria, and fungi to propagate themselves.
Diversity Flagella types
Zoospores may possess one or mo ...
) and are a sister group to more advanced land fungi that lack flagella. Several chytrid species are pathogens, but have not had their genomes sequenced yet.
* ''
Batrachochytrium dendrobatidis
''Batrachochytrium dendrobatidis'' ( ), also known as ''Bd'' or the amphibian chytrid fungus, is a fungus that causes the disease chytridiomycosis in amphibians.
Since its discovery in 1998 by Lee Berger, the disease devastated amphibian popula ...
'' JEL423, amphibian pathogen (2006
)
* ''
Batrachochytrium dendrobatidis
''Batrachochytrium dendrobatidis'' ( ), also known as ''Bd'' or the amphibian chytrid fungus, is a fungus that causes the disease chytridiomycosis in amphibians.
Since its discovery in 1998 by Lee Berger, the disease devastated amphibian popula ...
'' JAM81, amphibian pathogen (2006
)
* ''
Spizellomyces punctatus'' DAOM BR117 (2009
)
* ''
Gonapodya prolifera'' JEL478 (
Monoblepharidomycetes
Members of the Monoblepharidomycetes have a filamentous thallus that is either extensive or simple and unbranched. They frequently have a holdfast at the base. In contrast to other taxa in their phylum, some reproduce using autospores, althoug ...
) (2011
)
*''
Chytriomyces'' sp. MP 71
* ''
Entophlycits helioformis'' JEL805
* ''
Gaertneriomyces semiglobifer'' Barr43
* ''
Globomyces pollinis-pini''
* ''
Rhizoclomsatium globosum''
Blastocladiomycota
Blastocladiomycota is one of the currently recognized phyla within the kingdom Fungi.Hibbett DS et al. 2007. A higher-level phylogenetic classification of the fungi. Mycological Research 111:509–47. Blastocladiomycota was originally the order ...
* ''
Allomyces macrogynus'' ATCC 38327 (
Blastocladiomycota
Blastocladiomycota is one of the currently recognized phyla within the kingdom Fungi.Hibbett DS et al. 2007. A higher-level phylogenetic classification of the fungi. Mycological Research 111:509–47. Blastocladiomycota was originally the order ...
) (2009
)
* ''
Catenaria anguillulae'' PL171 (
Blastocladiomycota
Blastocladiomycota is one of the currently recognized phyla within the kingdom Fungi.Hibbett DS et al. 2007. A higher-level phylogenetic classification of the fungi. Mycological Research 111:509–47. Blastocladiomycota was originally the order ...
)
Neocallimastigomycota
Neocallimastigomycota is a phylum containing anaerobic fungi, which are symbionts found in the digestive tracts of larger herbivores. Anaerobic fungi were originally placed within phylum Chytridiomycota, within Order Neocallimastigales but late ...
* ''
Piromyces'' sp. E2 (
Neocallimastigomycota
Neocallimastigomycota is a phylum containing anaerobic fungi, which are symbionts found in the digestive tracts of larger herbivores. Anaerobic fungi were originally placed within phylum Chytridiomycota, within Order Neocallimastigales but late ...
) (2011
)
* ''
Anaeromyces'' sp. S4
* ''
Neocallimastix
''Neocallimastix'' is a genus of obligately anaerobic rumen fungi
A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar ...
'' sp. G1
* ''
Orpinomyces'' sp. C1A
Microsporidia
Microsporidia are a group of spore-forming unicellular parasites. These spores contain an extrusion apparatus that has a coiled polar tube ending in an anchoring disc at the apical part of the spore. They were once considered protozoans or pr ...
* ''
Encephalitozoon cuniculi'', human pathogen (2001
)
* ''
Encephalitozoon intestinalis
''Encephalitozoon intestinalis'' is a parasite. It can cause microsporidiosis.
It is notable as having one of the smallest genome among known eukaryotic organisms, containing only 2.25 million base pairs. Its genome was completely sequenced in 2 ...
'' ATCC 50506, human pathogen (2010
)
* ''
Enterocytozoon bieneusi'', human pathogen particularly in the context of HIV infection (~60% of genome 2009,
2010
)
* ''
Nosema ceranae'', honey bee pathogen (2009
)
* ''
Octosporea bayeri'' OER 3-3, ''Daphnia'' pathogen (2009
)
Mucoromycota
Mucoromycotina
*''
Absidia padenii''
*''
Absidia repens
''Absidia'' is a genus of zygote fungi in the family Cunninghamellaceae. ''Absidia'' species are ubiquitous in most environments where they are often associated with warm decaying plant matter, such as compost heaps. Some species in the genus ...
''
*''
Backusella circina''
*''
Circinella umbellata''
*''
Cokeromyces recurvatus''
*''
Cunninghamella echinulata
''Cunninghamella echinulata'' is a fungal species in the genus '' Cunninghamella.'' It is an asexually reproducing fungus and a mesophile, preferring intermediate temperature ranges. ''C. echinulata'' is a common air contaminant, and is currentl ...
''
*''
Dichotomocladium elegans''
*''
Fennellomyces'' sp.
*''
Gilbertella persicaria var. persicaria''
*''
Gongronella butleri''
*''
Hesseltinella vesiculosa''
*''
Lichtheimia corymbifera''
*''
Lichtheimia hyalospora''
*''
Mucor circinelloides
''Mucor circinelloides'' is a dimorphic fungus belonging to the Order Mucorales (Phylum Mucoromycota). It has a worldwide distribution, found mostly in soil, dung and root vegetables. This species is described as not known to be able to produce m ...
''
*''
Mucor cordense''
*''
Mucor indicus
''Mucor indicus'' is among the most important members of zygomycetes fungi. This dimorphic fungus is capable of production of several valuable products. Some strains of the fungus have been isolated from the traditional Indonesian food tempeh. M ...
''
*''
Mucor heterogamus''
*''
Mycotypha africana''
*''
Parasitella parasitica''
*''
Phascolomyces articulosus''
*''
Phycomyces blakesleeanus''
*''
Phycomyces nitens''
*''
Pilaira anomala
''Pilaira'' is a genus of zygote fungi described in 1875.
Species
The genus consists of the following species:
* '' Pilaira anomala'' (Ces.) J. Schröt.
* ''Pilaira australis'' Urquhart, Coulon & Idnurm
* '' Pilaira caucasica'' Milko
* ''Pi ...
''
*''
Pilobolus umbonatus''
*''
Radiomyces spectabilis''
*''
Rhizopus delemar''
* ''
Rhizopus oryzae
''Rhizopus oryzae'' is a filamentous heterothallic microfungus that occurs as a saprotroph in soil, dung, and rotting vegetation. This species is very similar to ''Rhizopus stolonifer'', but it can be distinguished by its smaller sporangia and a ...
'', human pathogen (
mucormycosis
Mucormycosis, also known as black fungus, is a serious fungal infection that comes under fulminant fungal sinusitis, usually in people who are immunocompromised. It is curable only when diagnosed early. Symptoms depend on where in the body the ...
) (2009
)
*''
Rhizopus microsporus''
*''
Saksenaea vasiformis''
*''
Spinellus fuiger''
*''
Sporodiniella umbellata''
*''
Syncephalastrum racemosum''
*''
Thamnidium elegans''
*''
Umbelopsis isabellina''
*''
Umbelopsis ramanniana''
*''
Zychaea mexicana''
Glomeromycotina
*''
Rhizophagus irregularis
''Rhizophagus irregularis'' (previously known as ''Glomus intraradices'') is an arbuscular mycorrhizal fungus used as a soil inoculant in agriculture and horticulture. ''Rhizophagus irregularis'' is also commonly used in scientific studies of th ...
''
Mortierellomycotina
* ''
Mortierella alpina''
Strain: ATCC 32222, commercial source of arachidonic acid (2011
)
*''
Lobosporangium transversale''
*''
Mortierella elongata''
*''
Mortierella humilis''
*''
Mortierella multidivaricata''
*''
Mortierella verticillata''
Zoopagomycota
Kickxellomycotina
Kickxellomycotina is a fungus grouping. In the subkingdom of Zoopagomyceta .
The name was changed from "Harpellomycotina", because "Kickxellomycotina" had an older stem. It came from the genus '' Kickxella'', named after Jean Kickx.
Orders in ...
*''
Coemansia reversa
''Coemansia'' is a genus of fungi in the family Kickxellaceae. It was circumscribed in 1873.
The genus name of ''Coemansia'' is in honour of Henri Eugène Lucien Gaëtan Coemans (1825-1871), a Belgian clergyman and botanist (Mycology),
worked i ...
''
*''
Coemansia spiralis
''Coemansia'' is a genus of fungi in the family Kickxellaceae. It was circumscribed in 1873.
The genus name of ''Coemansia'' is in honour of Henri Eugène Lucien Gaëtan Coemans (1825-1871), a Belgian clergyman and botanist (Mycology),
worked i ...
''
*''
Kickxella alabastrina''
*''
Linderina pennicpora''
*''
Martensiomyces pterosporus''
*''
Ramicandelaber brevisporus''
*''
Smittium culicis''
*''
Smittium mucronatum''
*''
Zancudomyces culisetae''
Entomophthoromycotina
*''
Basidiobolus meristosporus''
*''
Conidiobolus coronatus
''Conidiobolus coronatus'' is a saprotrophic fungus, first described by Costantin in 1897 as ''Boudierella coronata''. Though this fungus has also been known by the name ''Entomophthora coronata'', the correct name is ''Conidiobolus coronatus''. ...
''
*''
Condidiobolus thromboides''
*''
Massospora cicadina''
Zoopagomycotina
The Zoopagomycotina are a subdivision (''incertae sedis'') of the fungal division Zygomycota ''sensu lato''. It contains 5 families and 20 genera.[ ...]
*''
Syncephalis fuscata''
*''
Syncephalis plumigaleata''
*''
Syncephalis pseudoplumigaleata''
*''
Piptocephalis cylindrospora''
See also
*
List of sequenced animal genomes
This list of sequenced animal genomes contains animal species for which complete genome sequences have been assembled, annotated and published. Substantially complete draft genomes are included, but not partial genome sequences or organelle-only se ...
*
List of sequenced archaeal genomes
This list of sequenced archaeal genomes contains all the archaea known to have publicly available complete genome sequences that have been assembled, annotated and deposited in public databases. ''Methanococcus jannaschii'' was the first archaeon ...
*
List of sequenced bacterial genomes
This list of sequenced eubacterial genomes contains most of the eubacteria known to have publicly available complete genome sequences. Most of these sequences have been placed in the International Nucleotide Sequence Database Collaboration, a publ ...
*
List of sequenced eukaryotic genomes
This list of "sequenced" eukaryotic genomes contains all the eukaryotes known to have publicly available complete nuclear and organelle genome sequences that have been sequenced, assembled, annotated and published; draft genomes are not inclu ...
*
List of sequenced plant genomes
External links
Fungal Genome Initiative(includes draft genomes)
UniProt query(complete proteome and fungi)
References
{{DEFAULTSORT:Sequenced fungi genomes
Lists of fungi
Biology-related lists
Fungi
A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from ...