HOME

TheInfoList



OR:

Agroinfiltration is a method used in
plant biology Botany, also called plant science, is the branch of natural science Natural science or empirical science is one of the branches of science concerned with the description, understanding and prediction of natural phenomena, based on empiri ...
and especially lately in plant biotechnology to induce
transient expression Transient expression, more frequently referred to "transient gene expression", is the temporary expression of genes that are expressed for a short time after nucleic acid, most frequently plasmid DNA encoding an expression cassette, has been int ...
of
gene In biology, the word gene has two meanings. The Mendelian gene is a basic unit of heredity. The molecular gene is a sequence of nucleotides in DNA that is transcribed to produce a functional RNA. There are two types of molecular genes: protei ...
s in a
plant Plants are the eukaryotes that form the Kingdom (biology), kingdom Plantae; they are predominantly Photosynthesis, photosynthetic. This means that they obtain their energy from sunlight, using chloroplasts derived from endosymbiosis with c ...
, or isolated leaves from a plant, or even in cultures of plant cells, in order to produce a desired
protein Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residue (biochemistry), residues. Proteins perform a vast array of functions within organisms, including Enzyme catalysis, catalysing metab ...
. In the method, a
suspension Suspension or suspended may refer to: Science and engineering * Car suspension * Cell suspension or suspension culture, in biology * Guarded suspension, a software design pattern in concurrent programming suspending a method call and the calling ...
of ''
Agrobacterium tumefaciens ''Agrobacterium tumefaciens'' (also known as ''Rhizobium radiobacter'') is the causal agent of crown gall disease (the formation of tumours) in over 140 species of eudicots. It is a rod-shaped, Gram-negative soil bacterium. Symptoms are cause ...
'' is introduced into a plant leaf by direct injection or by vacuum infiltration, or brought into association with plant cells immobilised on a porous support (plant cell packs), whereafter the bacteria transfer the desired gene into the plant
cell Cell most often refers to: * Cell (biology), the functional basic unit of life * Cellphone, a phone connected to a cellular network * Clandestine cell, a penetration-resistant form of a secret or outlawed organization * Electrochemical cell, a de ...
s via transfer of
T-DNA The transfer DNA (abbreviated T-DNA) is the transferred DNA of the Ti plasmid, tumor-inducing (Ti) plasmid of some species of bacteria such as ''Agrobacterium tumefaciens'' and ''Agrobacterium rhizogenes (actually an Ri plasmid)''. The T-DNA is tr ...
. The main benefit of agroinfiltration when compared to the more traditional plant transformation is speed and convenience, although yields of the recombinant protein are generally also higher and more consistent. The first step is to introduce a gene of interest to a strain of ''Agrobacterium tumefaciens''. Subsequently, the strain is grown in a liquid culture and the resulting bacteria are washed and suspended into a suitable
buffer solution A buffer solution is a solution where the pH does not change significantly on dilution or if an acid or base is added at constant temperature. Its pH changes very little when a small amount of strong acid or base is added to it. Buffer solution ...
. For injection, this solution is then placed in a
syringe A syringe is a simple reciprocating pump consisting of a plunger (though in modern syringes, it is actually a piston) that fits tightly within a cylindrical tube called a barrel. The plunger can be linearly pulled and pushed along the inside ...
(without a needle). The tip of the syringe is pressed against the underside of a
leaf A leaf (: leaves) is a principal appendage of the plant stem, stem of a vascular plant, usually borne laterally above ground and specialized for photosynthesis. Leaves are collectively called foliage, as in "autumn foliage", while the leav ...
while simultaneously applying gentle counterpressure to the other side of the leaf. The ''Agrobacterium'' suspension is then injected into the airspaces inside the leaf through
stomata In botany, a stoma (: stomata, from Greek ''στόμα'', "mouth"), also called a stomate (: stomates), is a pore found in the epidermis of leaves, stems, and other organs, that controls the rate of gas exchange between the internal air spa ...
, or sometimes through a tiny incision made to the underside of the leaf. Vacuum infiltration is another way to introduce ''Agrobacterium'' deep into plant tissue. In this procedure, leaf disks, leaves, or whole plants are submerged in a beaker containing the solution, and the beaker is placed in a vacuum chamber. The vacuum is then applied, forcing air out of the intercellular spaces within the leaves via the stomata. When the vacuum is released, the pressure difference forces the "Agrobacterium" suspension into the leaves through the stomata into the
mesophyll A leaf (: leaves) is a principal appendage of the stem of a vascular plant, usually borne laterally above ground and specialized for photosynthesis. Leaves are collectively called foliage, as in "autumn foliage", while the leaves, stem, f ...
tissue. This can result in nearly all of the cells in any given leaf being in contact with the bacteria. Once inside the leaf the ''Agrobacterium'' remains in the intercellular space and transfers the gene of interest as part of the Ti plasmid-derived T-DNA in high copy numbers into the plant cells. The gene transfer occurs when the plant signals are induced and physical contact is made between the plant cells and the bacteria. The bacteria create a mechanism that burrows a hole and transfers the new T-DNA strand into the plant cell. The T-DNA moves into the nucleus of the plant and begins to integrate into the plants' chromosome. The gene is then transiently expressed through RNA synthesis from appropriate promoter sequences in all transfected cells (no selection for stable integration is performed). The plant can be monitored for a possible effect in the
phenotype In genetics, the phenotype () is the set of observable characteristics or traits of an organism. The term covers the organism's morphology (physical form and structure), its developmental processes, its biochemical and physiological propert ...
, subjected to experimental conditions or harvested and used for purification of the protein of interest. Many plant species can be processed using this method, but the most common ones are ''
Nicotiana benthamiana ''Nicotiana benthamiana'', colloquially known as benth or benthi, is a species of ''Nicotiana'' indigenous to Australia. It is a close relative of tobacco. A synonym for this species is ''Nicotiana suaveolens'' var. ''cordifolia'', a descripti ...
'' and less often, ''
Nicotiana tabacum ''Nicotiana tabacum'', or cultivated tobacco, is an annually grown herbaceous plant of the genus ''Nicotiana''. ''N. tabacum'' is the most commonly grown species in the genus ''Nicotiana,'' as the plant's leaves are commercially harvested to be ...
''. Transient expression in cultured plant cell packs is a new procedure, recently patented by the Fraunhofer Institute IVV, Germany. For this technique, suspension cultured cells of tobacco (e.g.: NT1 or BY2 cell lines of ''Nicotiana tabacum'') are immobilised by filtration onto a porous support to form a well-aerated cell pack, then incubated with recombinant ''Agrobacterium'' for a time to allow T-DNA transfer, before refiltration to remove excess bacteria and liquid. Incubation of the cell pack in a humid environment for time periods up to several days allows transient expression of protein. Secreted proteins can be washed out of the cell pack by application of buffer and further filtration.


Silencing suppressors in agroinfiltration

It is quite common to coinfiltrate the ''Agrobacterium'' carrying the construct of interest together with another ''Agrobacterium'' carrying a silencing suppressor protein gene such as the one encoding the p19 protein from the plant pathogenic
Tomato bushy stunt virus Tomato bushy stunt virus (TBSV) is a virus of the tombusvirus family. It was first reported in tomatoes in 1935 and primarily affects vegetable crops, though it is not generally considered an economically significant plant pathogen. Depending u ...
(TBSV), or the NSs protein from
tomato spotted wilt virus Tomato spotted wilt virus (TSWV) is a spherical Sense (molecular biology), negative-sense RNA virus. Transmitted by thrips, it causes serious losses in economically important crops and it is one of the most economically devastating plant viruses ...
(TSWV). TBSV was first discovered in 1935 in
tomato The tomato (, ), ''Solanum lycopersicum'', is a plant whose fruit is an edible Berry (botany), berry that is eaten as a vegetable. The tomato is a member of the nightshade family that includes tobacco, potato, and chili peppers. It originate ...
es and results in plants with stunted growth and deformed fruits. TSWV was discovered in tomatoes in Australia in 1915, and for many years was the only member of what is now known as genus ''
Tospovirus ''Orthotospovirus'' is a genus of negative-strand RNA viruses, in the family ''Tospoviridae'' of the order '' Elliovirales,'' which infects plants. Tospoviruses take their name from the species Tomato spotted wilt virus (TSWV) which was discover ...
'', family ''
Bunyaviridae ''Bunyaviricetes'' is a class of segmented negative-strand RNA viruses with mainly tripartite genomes. Member viruses infect arthropods, plants, protozoans, and vertebrates. The name ''Bunyaviricetes'' derives from Bunyamwera, where the virus B ...
''.
Acetosyringone Acetosyringone is a phenolic natural product and a chemical compound related to acetophenone and 2,6-dimethoxyphenol. It was first described in relation to lignan/phenylpropanoid-type phytochemicals, with isolation from a variety of plant sour ...
is also commonly added to the agroinfiltration media to increase transformation efficiency, thus construct of interest expression. In order to defend itself against viruses and other pathogens that introduce foreign nucleic acids into their cells, plants have developed a system of post-transcriptional gene silencing (PTGS) where
small interfering RNA Small interfering RNA (siRNA), sometimes known as short interfering RNA or silencing RNA, is a class of double-stranded RNA, double-stranded non-coding RNA, non-coding RNA, RNA molecules, typically 20–24 base pairs in length, similar to microR ...
s are produced from
double-stranded RNA Double-stranded RNA (dsRNA) is RNA with two complementary strands found in cells. It is similar to DNA but with the replacement of thymine by uracil and the adding of one oxygen atom. Despite the structural similarities, much less is known about ...
in order to create a sequence specific degradation pathway that efficiently silence non-native genes. Many plant viruses have developed mechanisms that counter the plants PTGS-systems by evolving proteins, such as p19 and NSs, that interfere with the PTGS-pathway at different levels. Although it is not clear exactly how p19 works to suppress RNA silencing, studies have shown that transiently expressed proteins in ''Nicotiana benthamiana'' leaves have an up to 50-fold higher yield when coinfiltrated with TBSV p19. TSWV and other tospovirus NSs proteins have been shown to be effective as suppressors of both local and systemic silencing, and may be a useful alternative to p19 where the latter has been shown not to be effective. In other studies, p19 from
artichoke mottled crinkle virus The artichoke (''Cynara cardunculus'' var. ''scolymus''),Rottenberg, A., and D. Zohary, 1996: "The wild ancestry of the cultivated artichoke." Genet. Res. Crop Evol. 43, 53–58. also known by the other names: French artichoke, globe artichoke, ...
has been shown to have a similar, although weaker, effect to TBSV p19. However, it needs to be noted that the p19 protein is a recognised effector in certain plant species (e.g., Nicotiana tabacum pv. petit Gerard) that would trigger
hypersensitive response In Plant disease resistance, plant immunology, the hypersensitive response (HR) is a mechanism used by plants to prevent the spread of infection by microbial pathogens. HR is characterized by the rapid apoptosis, death of cells in the local regi ...
.


See also

*''
Agrobacterium ''Agrobacterium'' is a genus of Gram-negative bacteria established by Harold J. Conn, H. J. Conn that uses horizontal gene transfer to cause tumors in plants. ''Agrobacterium tumefaciens'' is the most commonly studied species in this genus. ''Agr ...
'' *
Transient expression Transient expression, more frequently referred to "transient gene expression", is the temporary expression of genes that are expressed for a short time after nucleic acid, most frequently plasmid DNA encoding an expression cassette, has been int ...


References

{{reflist, 30em Biotechnology Gene expression