Reeb Graph
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Reeb Graph
A Reeb graphY. Shinagawa, T.L. Kunii, and Y.L. Kergosien, 1991. Surface coding based on Morse theory. IEEE Computer Graphics and Applications, 11(5), pp.66-78 (named after Georges Reeb by René Thom) is a mathematical object reflecting the evolution of the level sets of a real-valued function on a manifold. According to a similar concept was introduced by G.M. Adelson-Velskii and A.S. Kronrod and applied to analysis of Hilbert's thirteenth problem. Proposed by G. Reeb as a tool in Morse theory, Reeb graphs are the natural tool to study multivalued functional relationships between 2D scalar fields \psi, \lambda, and \phi arising from the conditions \nabla \psi = \lambda \nabla \phi and \lambda \neq 0, because these relationships are single-valued when restricted to a region associated with an individual edge of the Reeb graph. This general principle was first used to study neutral surfaces in oceanography. Reeb graphs have also found a wide variety of applications in comput ...
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Shape Matching
A shape or figure is a graphical representation of an object or its external boundary, outline, or external surface, as opposed to other properties such as color, texture, or material type. A plane shape or plane figure is constrained to lie on a ''plane'', in contrast to ''solid'' 3D shapes. A two-dimensional shape or two-dimensional figure (also: 2D shape or 2D figure) may lie on a more general curved ''surface'' (a non-Euclidean two-dimensional space). Classification of simple shapes Some simple shapes can be put into broad categories. For instance, polygons are classified according to their number of edges as triangles, quadrilaterals, pentagons, etc. Each of these is divided into smaller categories; triangles can be equilateral, isosceles, obtuse, acute, scalene, etc. while quadrilaterals can be rectangles, rhombi, trapezoids, squares, etc. Other common shapes are points, lines, planes, and conic sections such as ellipses, circles, and parabolas. Among the mo ...
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Equivalence Relation
In mathematics, an equivalence relation is a binary relation that is reflexive, symmetric and transitive. The equipollence relation between line segments in geometry is a common example of an equivalence relation. Each equivalence relation provides a partition of the underlying set into disjoint equivalence classes. Two elements of the given set are equivalent to each other if and only if they belong to the same equivalence class. Notation Various notations are used in the literature to denote that two elements a and b of a set are equivalent with respect to an equivalence relation R; the most common are "a \sim b" and "", which are used when R is implicit, and variations of "a \sim_R b", "", or "" to specify R explicitly. Non-equivalence may be written "" or "a \not\equiv b". Definition A binary relation \,\sim\, on a set X is said to be an equivalence relation, if and only if it is reflexive, symmetric and transitive. That is, for all a, b, and c in X: * a \sim a ( ...
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Continuous Function
In mathematics, a continuous function is a function such that a continuous variation (that is a change without jump) of the argument induces a continuous variation of the value of the function. This means that there are no abrupt changes in value, known as '' discontinuities''. More precisely, a function is continuous if arbitrarily small changes in its value can be assured by restricting to sufficiently small changes of its argument. A discontinuous function is a function that is . Up until the 19th century, mathematicians largely relied on intuitive notions of continuity, and considered only continuous functions. The epsilon–delta definition of a limit was introduced to formalize the definition of continuity. Continuity is one of the core concepts of calculus and mathematical analysis, where arguments and values of functions are real and complex numbers. The concept has been generalized to functions between metric spaces and between topological spaces. The latter are t ...
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Topological Space
In mathematics, a topological space is, roughly speaking, a geometrical space in which closeness is defined but cannot necessarily be measured by a numeric distance. More specifically, a topological space is a set whose elements are called points, along with an additional structure called a topology, which can be defined as a set of neighbourhoods for each point that satisfy some axioms formalizing the concept of closeness. There are several equivalent definitions of a topology, the most commonly used of which is the definition through open sets, which is easier than the others to manipulate. A topological space is the most general type of a mathematical space that allows for the definition of limits, continuity, and connectedness. Common types of topological spaces include Euclidean spaces, metric spaces and manifolds. Although very general, the concept of topological spaces is fundamental, and used in virtually every branch of modern mathematics. The study of topologic ...
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Optimization Problem
In mathematics, computer science and economics, an optimization problem is the problem of finding the ''best'' solution from all feasible solutions. Optimization problems can be divided into two categories, depending on whether the variables are continuous or discrete: * An optimization problem with discrete variables is known as a '' discrete optimization'', in which an object such as an integer, permutation or graph must be found from a countable set. * A problem with continuous variables is known as a ''continuous optimization'', in which an optimal value from a continuous function must be found. They can include constrained problems and multimodal problems. Continuous optimization problem The '' standard form'' of a continuous optimization problem is \begin &\underset& & f(x) \\ &\operatorname & &g_i(x) \leq 0, \quad i = 1,\dots,m \\ &&&h_j(x) = 0, \quad j = 1, \dots,p \end where * is the objective function to be minimized over the -variable vector , * are called ...
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Cluster Analysis
Cluster analysis or clustering is the task of grouping a set of objects in such a way that objects in the same group (called a cluster) are more similar (in some sense) to each other than to those in other groups (clusters). It is a main task of exploratory data analysis, and a common technique for statistical data analysis, used in many fields, including pattern recognition, image analysis, information retrieval, bioinformatics, data compression, computer graphics and machine learning. Cluster analysis itself is not one specific algorithm, but the general task to be solved. It can be achieved by various algorithms that differ significantly in their understanding of what constitutes a cluster and how to efficiently find them. Popular notions of clusters include groups with small distances between cluster members, dense areas of the data space, intervals or particular statistical distributions. Clustering can therefore be formulated as a multi-objective optimization problem. ...
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Regression Analysis
In statistical modeling, regression analysis is a set of statistical processes for estimating the relationships between a dependent variable (often called the 'outcome' or 'response' variable, or a 'label' in machine learning parlance) and one or more independent variables (often called 'predictors', 'covariates', 'explanatory variables' or 'features'). The most common form of regression analysis is linear regression, in which one finds the line (or a more complex linear combination) that most closely fits the data according to a specific mathematical criterion. For example, the method of ordinary least squares computes the unique line (or hyperplane) that minimizes the sum of squared differences between the true data and that line (or hyperplane). For specific mathematical reasons (see linear regression), this allows the researcher to estimate the conditional expectation (or population average value) of the dependent variable when the independent variables take on a give ...
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Probability Density Function
In probability theory, a probability density function (PDF), or density of a continuous random variable, is a function whose value at any given sample (or point) in the sample space (the set of possible values taken by the random variable) can be interpreted as providing a ''relative likelihood'' that the value of the random variable would be close to that sample. Probability density is the probability per unit length, in other words, while the ''absolute likelihood'' for a continuous random variable to take on any particular value is 0 (since there is an infinite set of possible values to begin with), the value of the PDF at two different samples can be used to infer, in any particular draw of the random variable, how much more likely it is that the random variable would be close to one sample compared to the other sample. In a more precise sense, the PDF is used to specify the probability of the random variable falling ''within a particular range of values'', as opposed ...
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Statistical Inference
Statistical inference is the process of using data analysis to infer properties of an underlying distribution of probability.Upton, G., Cook, I. (2008) ''Oxford Dictionary of Statistics'', OUP. . Inferential statistical analysis infers properties of a population, for example by testing hypotheses and deriving estimates. It is assumed that the observed data set is sampled from a larger population. Inferential statistics can be contrasted with descriptive statistics. Descriptive statistics is solely concerned with properties of the observed data, and it does not rest on the assumption that the data come from a larger population. In machine learning, the term ''inference'' is sometimes used instead to mean "make a prediction, by evaluating an already trained model"; in this context inferring properties of the model is referred to as ''training'' or ''learning'' (rather than ''inference''), and using a model for prediction is referred to as ''inference'' (instead of ''prediction' ...
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Contour Tree
A Reeb graphY. Shinagawa, T.L. Kunii, and Y.L. Kergosien, 1991. Surface coding based on Morse theory. IEEE Computer Graphics and Applications, 11(5), pp.66-78 (named after Georges Reeb by René Thom) is a mathematical object reflecting the evolution of the level sets of a real-valued function on a manifold. According to a similar concept was introduced by G.M. Adelson-Velskii and A.S. Kronrod and applied to analysis of Hilbert's thirteenth problem. Proposed by G. Reeb as a tool in Morse theory, Reeb graphs are the natural tool to study multivalued functional relationships between 2D scalar fields \psi, \lambda, and \phi arising from the conditions \nabla \psi = \lambda \nabla \phi and \lambda \neq 0, because these relationships are single-valued when restricted to a region associated with an individual edge of the Reeb graph. This general principle was first used to study neutral surfaces in oceanography. Reeb graphs have also found a wide variety of applications in computati ...
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Polytree
In mathematics, and more specifically in graph theory, a polytree (also called directed tree, oriented tree; . or singly connected network.) is a directed acyclic graph whose underlying undirected graph is a tree. In other words, if we replace its directed edges with undirected edges, we obtain an undirected graph that is both connected and acyclic. A polyforest (or directed forest or oriented forest) is a directed acyclic graph whose underlying undirected graph is a forest. In other words, if we replace its directed edges with undirected edges, we obtain an undirected graph that is acyclic. A polytree is an example of an oriented graph. The term ''polytree'' was coined in 1987 by Rebane and Pearl.. Related structures * An arborescence is a directed rooted tree, i.e. a directed acyclic graph in which there exists a single source node that has a unique path to every other node. Every arborescence is a polytree, but not every polytree is an arborescence. * A multitree is a dire ...
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