Ciliophora
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Ciliophora
The ciliates are a group of alveolates characterized by the presence of hair-like organelles called cilia, which are identical in structure to eukaryotic flagella, but are in general shorter and present in much larger numbers, with a different undulating pattern than flagella. Cilia occur in all members of the group (although the peculiar Suctoria only have them for part of their life cycle) and are variously used in swimming, crawling, attachment, feeding, and sensation. Ciliates are an important group of protists, common almost anywhere there is water—in lakes, ponds, oceans, rivers, and soils. About 4,500 unique free-living species have been described, and the potential number of extant species is estimated at 27,000–40,000. Included in this number are many ectosymbiotic and endosymbiotic species, as well as some obligate and opportunistic parasites. Ciliate species range in size from as little as 10 µm in some colpodeans to as much as 4 mm in length in some ge ...
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Armophorea
Armophorea is a class of ciliates in the subphylum Intramacronucleata. . It was first resolved in 2004 and comprises three orders: Metopida, Clevelandellida, and Armophorida. Previously members of this class were thought to be heterotrichs because of similarities in morphology, most notably a characteristic dense arrangement of cilia surrounding their oral structures. However, the development of genetic tools and subsequent incorporation of DNA sequence information has led to major revisions in the evolutionary relationships of many protists, including ciliates. Metopids, clevelandellids, and armophorids were grouped into this class based on similarities in their small subunit rRNA sequences, making them one of two so-called "riboclasses" of ciliates, however, recent analyses suggest that Armophorida may not be related to the other two orders. Etymology The name Armophorea is thought to be derived from the Latin word ''arma,'' meaning weapons, or ''armus'', meaning shoulder ...
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Karyorelictea
Karyorelictea is a class of ciliates in the subphylum Postciliodesmatophora. Most species are members of the microbenthos community, that is, microscopic organisms found in the marine interstitial habitat, though one genus, '' Loxodes'', is found in freshwater. The majority of karyorelict taxa have not been cultivated in the laboratory, although clonal lines of '' Loxodes'' have been developed. Systematics According to Lynn (2008), the Karyorelictea class is divided into three orders: * Loxodida, containing the families Cryptopharyngidae and Loxodidae; * Protoheterotrichida, containing the families Aveliidae and Geleiidae; * Protostomatida, containing the families Kentrophoridae and Trachelocercidae. These three orders were defined morphologically, and have been confirmed with molecular phylogenetics. An additional family, Wilbertomorphidae, is of uncertain affiliation and has not been assigned to an order. Nuclear dimorphism All ciliates, including karyorelicteans, poss ...
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Alveolate
The alveolates (meaning "pitted like a honeycomb") are a group of protists, considered a major clade and superphylum within Eukarya. They are currently grouped with the stramenopiles and Rhizaria among the protists with tubulocristate mitochondria, the group being referred to as SAR. Characteristics The most notable shared characteristic is the presence of cortical (near the surface) alveoli (sacs). These are flattened vesicles (sacs) arranged as a layer just under the membrane and supporting it, typically contributing to a flexible pellicle (thin skin). In armored dinoflagellates they may contain stiff plates. Alveolates have mitochondria with tubular cristae (invaginations), and cells often have pore-like intrusions through the cell surface. The group contains free-living and parasitic organisms, predatory flagellates, and photosynthetic organisms. Almost all sequenced mitochondrial genomes of ciliates and apicomplexa are linear. The mitochondria almost all carry mtDNA ...
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Stentor (ciliate)
''Stentor'', sometimes called trumpet animalcules, are a genus of filter-feeding, heterotrophic ciliates, representative of the heterotrichs. They are usually horn-shaped, and reach lengths of two millimeters; as such, they are among the largest known extant unicellular organisms. They reproduce asexually through binary fission. Description The body, or cortex, is generally horn-shaped, hence the association with the Greek herald, and the former name "trumpet animalcule". A ring of prominent cilia around the anterior "bell" sweep in food and aid in swimming. Some reach several millimeters in length, making them among the largest single-celled organisms. ''Stentor'' can come in different colors: for example, ''S. coeruleus'' can appear blue due to the presence of stentorin, a natural pigment. As in many freshwater protozoans, ''Stentor'' has a contractile vacuole. Because the concentration of salt inside the cell and in the surrounding freshwater is different, ''Stentor'' mus ...
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Litostomatea
The Litostomatea are a class of ciliates. The group consists of three subclasses: Haptoria, Trichostomatia and Rhynchostomatia. Haptoria includes mostly carnivorous forms such as '' Didinium'', a species of which preys primarily on the ciliate ''Paramecium''. Trichostomatia (trichostomes) are mostly endosymbionts in the digestive tracts of vertebrates. These include the species ''Balantidium coli'', which is the only ciliate parasitic in humans. The group Rhynchostomatia includes two free-living orders previously included among the Haptoria, but now known to be genetically distinct from them, the Dileptida and the Tracheliida. Morphology In litostomes, the body cilia arise from structures in the cell cortex called monokinetids, which are made up of a single cilium and its associated structures, such as basal bodies and microtubular fibres. These have an ultrastructural arrangement characteristic to the group. The cell "mouth" (cytostome) is apical or subapical. In trichostome ...
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Protist
A protist () is any eukaryotic organism (that is, an organism whose cells contain a cell nucleus) that is not an animal, plant, or fungus. While it is likely that protists share a common ancestor (the last eukaryotic common ancestor), the exclusion of other eukaryotes means that protists do not form a natural group, or clade. Therefore, some protists may be more closely related to animals, plants, or fungi than they are to other protists. However, like the groups '' algae'', ''invertebrates'', and '' protozoans'', the biological category ''protist'' is used for convenience. Others classify any unicellular eukaryotic microorganism as a protist. The study of protists is termed protistology. History The classification of a third kingdom separate from animals and plants was first proposed by John Hogg in 1860 as the kingdom Protoctista; in 1866 Ernst Haeckel also proposed a third kingdom Protista as "the kingdom of primitive forms". Originally these also included prokaryotes ...
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Prostomatea
Prostomatea is a class of ciliates. It includes the genera ''Coleps ''Coleps'' is a genus of ciliates in the class Prostomatea with barrel-shaped bodies surrounded by regularly arranged plates composed of calcium carbonate. Description Species of ''Coleps'' can grow up to 250 µm in length, but are usu ...'' and '' Pelagothrix''. References Further reading Intramacronucleata Ciliate classes {{ciliate-stub ...
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Coleps
''Coleps'' is a genus of ciliates in the class Prostomatea with barrel-shaped bodies surrounded by regularly arranged plates composed of calcium carbonate. Description Species of ''Coleps'' can grow up to 250 µm in length, but are usually under 100 µm in their longest axis. ''Coleps'' can be Taxonomy (biology), taxonomically distinguished by the ornamentation of the ectoplasm (cell biology), ectoplasmic plates which make up their Test (biology), test. These plates are located outside Alveolate, alveolar vesicles of the cell cortex, and contain both organic and inorganic components, the latter of which is mostly amorphous Biomineralization, calcium carbonate. Predatory behavior ''Coleps'' feeds on bacteria, algae, flagellates, living and dead ciliates, animal and plant tissues. ''Coleps'' uses toxicysts, which are organelles containing poison that it uses to capture its prey from its oral area. It extrudes tube-like structures to force toxicysts into its prey and w ...
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Dileptus
''Dileptus'' is a genus of unicellular ciliates in the class Litostomatea. Species of ''Dileptus'' occur in fresh and salt water, as well as mosses and soils. Most are aggressive predators equipped with long, mobile proboscides lined with toxic extrusomes, with which they stun smaller organisms before consuming them. 13 species and subspecies of ''Dileptus'' are currently recognized.Vďačný, Peter, and Wilhelm Foissner. Monograph of the dileptids (Protista, Ciliophora, Rhynchostomatia). Land Oberösterreich, Biologiezentrum/Oberösterreichische Landesmuseen, 2012 ''Dileptus'' species have served as model organisms, used in the study of ciliary patterns, ontogenesis, conjugation and food acquisition. Appearance and characteristics ''Dileptus'' bodies are typically narrow or cylindrical, and have a macronucleus made up of more than a hundred scattered nodules. During cell division, these nodules divide individually. At the front end of the cell is a mobile proboscis. The cyto ...
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Paramecium
'' ''Paramecium'' ( , ; also spelled ''Paramoecium'') is a genus of eukaryotic, unicellular ciliates, commonly studied as a representative of the ciliate group. ''Paramecia'' are widespread in freshwater, brackish, and marine environments and are often very abundant in stagnant basins and ponds. Because some species are readily cultivated and easily induced to conjugate and divide, it has been widely used in classrooms and laboratories to study biological processes. Its usefulness as a model organism has caused one ciliate researcher to characterize it as the "white rat" of the phylum Ciliophora. Historical background ''Paramecia'' were among the first ciliates to be seen by microscopists, in the late 17th century. They were probably known to the Dutch pioneer of protozoology, Antonie van Leeuwenhoek, and were clearly described by his contemporary Christiaan Huygens in a letter of 1678. The earliest known illustration of a Paramecium was published anonymously in Philosophi ...
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Parablepharismea
Parablepharismea is a class of free-living marine and brackish anaerobic ciliates that form a major clade of obligate {{wiktionary, obligate As an adjective, obligate means "by necessity" (antonym ''facultative'') and is used mainly in biology in phrases such as: * Obligate aerobe, an organism that cannot survive without oxygen * Obligate anaerobe, an organism tha ... anaerobes within the SAL group ( Spirotrichea, Armophorea, and Litostomatea), together with the classes Muranotrichea and Armophorea. Parablepharismea are medium to large, elongated ciliates with navicular outline and holotrichous somatic ciliature composed of dikinetids without postciliodesmata. Their oral ciliature is composed of bipartite paroral membrane and adoral zone of membranelles. They host a thick coat of prokaryotic ectosymbionts and cytoplasmic endosymbionts. They are found in micro-oxic marine to brackish habitats. Parablepharismea may be related to the deep sea Cariacotrichea ciliates. This cla ...
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Plagiopylid
The plagiopylids are a small order of ciliates, including a few forms common in anaerobic habitats. The body cilia are dense, and arise from monokinetids with an entirely unique ultrastructure; one or two rows of dikinetids run into the oral cavity, which takes the form of a groove, with a deep tube lined by oral cilia leading to the mouth. The order was introduced by Eugen Small and Denis Lynn in 1985, who treated it as a subclass of Oligohymenophorea. Since then they tend to be treated as an independent class, possibly affiliated with the Colpodea. Class Plagiopylea is divided into two clades: one contains members of the order Plagiopylida (like ''Plagiopyla frontata'' and '' Trimyema compressum'') and the second clade contains plagiopylean ciliate associated with denitrifying obligate endosymbiont An ''endosymbiont'' or ''endobiont'' is any organism that lives within the body or cells of another organism most often, though not always, in a mutualistic relationship. (The t ...
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