Catalogue Of Life
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Catalogue Of Life
The Catalogue of Life (CoL) is an online database that provides an index of known species of animals, plants, fungi, and microorganisms. It was created in 2001 as a partnership between the global Species 2000 and the American Integrated Taxonomic Information System. The Catalogue is used by research scientists, citizen scientists, educators, and policy makers. The Catalogue is also used by the Biodiversity Heritage Library, the Barcode of Life Data System, '' Encyclopedia of Life'', and the Global Biodiversity Information Facility. The Catalogue currently compiles data from 165 peer-reviewed taxonomic databases that are maintained by specialist institutions around the world. the COL Checklist lists 2,067,951 of the world's 2.2m extant species known to taxonomists on the planet at present time. Structure The Catalogue of Life employs a simple data structure to provide information on synonymy, grouping within a taxonomic hierarchy, common names, distribution and ecological e ...
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Online Database
In computing, a database is an organized collection of Data (computing), data or a type of data store based on the use of a database management system (DBMS), the software that interacts with end users, Application software, applications, and the database itself to capture and analyze the data. The DBMS additionally encompasses the core facilities provided to administer the database. The sum total of the database, the DBMS and the associated applications can be referred to as a database system. Often the term "database" is also used loosely to refer to any of the DBMS, the database system or an application associated with the database. Before digital storage and retrieval of data have become widespread, index cards were used for data storage in a wide range of applications and environments: in the home to record and store recipes, shopping lists, contact information and other organizational data; in business to record presentation notes, project research and notes, and contact ...
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European Nucleotide Archive
The European Nucleotide Archive (ENA) is a repository providing free and unrestricted access to annotated nucleic acid sequence, DNA and RNA sequences. It also stores complementary information such as experimental procedures, details of Genome project#Genome assembly, sequence assembly and other metadata related to genome project, sequencing projects. The archive is composed of three main databases: the Sequence Read Archive, the Trace Archive and the EMBL Nucleotide Sequence Database (also known as EMBL-bank). The ENA is produced and maintained by the European Bioinformatics Institute and is a member of the International Nucleotide Sequence Database Collaboration (INSDC) along with the DNA Data Bank of Japan and GenBank. The ENA has grown out of the EMBL Data Library which was released in 1982 as the first internationally supported resource for nucleotide sequence data. As of early 2012, the ENA and other INSDC member databases each contained complete genomes of 5,682 organisms ...
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Phylogenetics
In biology, phylogenetics () is the study of the evolutionary history of life using observable characteristics of organisms (or genes), which is known as phylogenetic inference. It infers the relationship among organisms based on empirical data and observed heritable traits of DNA sequences, protein amino acid sequences, and morphology. The results are a phylogenetic tree—a diagram depicting the hypothetical relationships among the organisms, reflecting their inferred evolutionary history. The tips of a phylogenetic tree represent the observed entities, which can be living taxa or fossils. A phylogenetic diagram can be rooted or unrooted. A rooted tree diagram indicates the hypothetical common ancestor of the taxa represented on the tree. An unrooted tree diagram (a network) makes no assumption about directionality of character state transformation, and does not show the origin or "root" of the taxa in question. In addition to their use for inferring phylogenetic pa ...
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Internet Properties Established In 2001
The Internet (or internet) is the global system of interconnected computer networks that uses the Internet protocol suite (TCP/IP) to communicate between networks and devices. It is a network of networks that consists of private, public, academic, business, and government networks of local to global scope, linked by a broad array of electronic, wireless, and optical networking technologies. The Internet carries a vast range of information resources and services, such as the interlinked hypertext documents and applications of the World Wide Web (WWW), electronic mail, internet telephony, streaming media and file sharing. The origins of the Internet date back to research that enabled the time-sharing of computer resources, the development of packet switching in the 1960s and the design of computer networks for data communication. The set of rules (communication protocols) to enable internetworking on the Internet arose from research and development commissioned in the ...
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Biodiversity Databases
Biodiversity is the variability of life on Earth. It can be measured on various levels. There is for example genetic variability, species diversity, ecosystem diversity and phylogenetic diversity. Diversity is not distributed evenly on Earth. It is greater in the tropics as a result of the warm climate and high primary productivity in the region near the equator. Tropical forest ecosystems cover less than one-fifth of Earth's terrestrial area and contain about 50% of the world's species. There are latitudinal gradients in species diversity for both marine and terrestrial taxa. Since life began on Earth, six major mass extinctions and several minor events have led to large and sudden drops in biodiversity. The Phanerozoic aeon (the last 540 million years) marked a rapid growth in biodiversity via the Cambrian explosion. In this period, the majority of multicellular phyla first appeared. The next 400 million years included repeated, massive biodiversity losses. T ...
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Biology Websites
Biology is the scientific study of life and living organisms. It is a broad natural science that encompasses a wide range of fields and unifying principles that explain the structure, function, growth, origin, evolution, and distribution of life. Central to biology are five fundamental themes: the cell as the basic unit of life, genes and heredity as the basis of inheritance, evolution as the driver of biological diversity, energy transformation for sustaining life processes, and the maintenance of internal stability (homeostasis). Biology examines life across multiple levels of organization, from molecules and cells to organisms, populations, and ecosystems. Subdisciplines include molecular biology, physiology, ecology, evolutionary biology, developmental biology, and systematics, among others. Each of these fields applies a range of methods to investigate biological phenomena, including observation, experimentation, and mathematical modeling. Modern biology is grounded i ...
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World Register Of Marine Species
The World Register of Marine Species (WoRMS) is a taxonomic database that aims to provide an authoritative and comprehensive catalogue and list of names of marine organisms. Content The content of the registry is edited and maintained by scientific specialists on each group of organism. These taxonomists control the quality of the information, which is gathered from the primary scientific literature as well as from some external regional and taxon-specific databases. WoRMS maintains valid names of all marine organisms, but also provides information on synonyms and invalid names. It is an ongoing task to maintain the registry, since new species are constantly being discovered and described by scientists; in addition, the nomenclature and taxonomy of existing species is often corrected or changed as new research is constantly being published. Subsets of WoRMS content are made available, and can have separate badging and their own home/launch pages, as "subregisters", such as th ...
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Wikispecies
Wikispecies is a wiki-based online project supported by the Wikimedia Foundation. Its aim is to create a comprehensive open content catalogue of all species; the project is directed at scientists, rather than at the general public. Jimmy Wales stated that editors are not required to fax in their Academic degree, degrees, but that submissions will have to pass muster with a technical audience. Wikispecies is available under the GNU Free Documentation License and Creative Commons licenses, CC BY-SA 4.0. Started in September 2004, with biologists around the world invited to contribute, the project had grown to a framework encompassing the Linnaean taxonomy with links to Wikipedia articles on individual species by April 2005. History :species:User:Benedikt, Benedikt Mandl coordinated the efforts of several people who were interested in getting involved with the project and contacted potential supporters in the early summer of 2004. Databases were evaluated and the administrators c ...
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Global Biodiversity
Global biodiversity is the measure of biodiversity on planet Earth and is defined as the total variability of life forms. More than 99 percent of all species that ever lived on Earth are estimated to be extinct. Estimates on the number of Earth's current species range from 2 million to 1 trillion, but most estimates are around 11 million species or fewer. About 1.74 million species were databased as of 2018, and over 80 percent have not yet been described. The total amount of DNA base pairs on Earth, as a possible approximation of global biodiversity, is estimated at 5.0 x 1037, and weighs 50 billion tonnes. In comparison, the total mass of the biosphere has been estimated to be as much as 4 TtC (trillion tons of carbon). In other related studies, around 1.9 million extant species are believed to have been described currently, but some scientists believe 20% are synonyms, reducing the total valid described species to 1.5 million. In 2013, a study published in Science estimated the ...
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ARKive
ARKive was a global initiative with the mission of "promoting the conservation of the world's threatened species, through the power of wildlife imagery", which it did by locating and gathering films, photographs and audio recordings of the world's species into a centralised digital archive. Its priority was the completion of audio-visual profiles for the c. 17,000 species on the IUCN Red List of Threatened Species. The project was an initiative of Wildscreen, a UK-registered educational charity, based in Bristol. The technical platform was created by Hewlett-Packard, as part of the HP Labs' Digital Media Systems research programme. ARKive had the backing of leading conservation organisations, including BirdLife International, Conservation International, International Union for Conservation of Nature (IUCN), the United Nations' World Conservation Monitoring Centre (UNEP-WCMC), and the World Wide Fund for Nature (WWF), as well as leading academic and research institutions, such ...
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Global Species List Working Group
The Global Species List Working Group (GSLWG) is a non-profit organization and non-governmental organization, founded in 2020, developed under the umbrella of the IUBS with the aim of creating a governance system that imbues global taxon lists with a legitimacy and authority respected by both taxonomists and the users of taxonomy. The organization was developed in response to several publications that demonstrated the need for stability in the names of species. The founding meeting was held in Charles Darwin University in Darwin, Australia in January 2020. The initial impetus for the group arose from an opinion piece published in the journal ''Nature'' by Stephen Garnett and Les Christidis. This piece aroused backlash within the taxonomic community with fears of unnecessary governance being proposed on the science of taxonomy. In a response with 184 authors led by Scott Thomson and Richard Pyle discussion followed. Efforts to reconcile the differences of opinion was made and f ...
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Hierarchical Classification
Hierarchical classification is a system of grouping things according to a hierarchy. In the field of machine learning, hierarchical classification is sometimes referred to as instance space decomposition, which splits a complete multi-class classification, multi-class problem into a set of smaller classification problems. See also * Deductive classifier * Cascading classifiers * Faceted classification References External links Hierarchical Classification – a useful approach for predicting thousands of possible categories
Classification algorithms {{AI-stub ...
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