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Aurantimonadaceae
The ''Aurantimonadaceae'' are a small family of marine bacteria. Notable Species '' Aurantimonas coralicida'' causes a white plague in corals. '' Fulvimarina pelagi'' was isolated from seawater, and takes the form of nonmotile rods. ''Fulvimarina pelagi'' is an obligate aerobe, and obtains its nourishment chemoheterotrophically. It tests positive for oxidase and catalase, and contains carotenoid pigments, possibly to protect against solar radiation. Etymology The name ''Aurantimonas'' derives from: New Latin ''aurantus'', orange-coloured; Greek ''monas'' (μονάς), a unit; to mean an orange-coloured unicellular organism. Members of the genus ''Aurantimonas'' can be referred to as aurantimonads (''viz.'' trivialisation of names). Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming an ...
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Aureimonas
''Aureimonas'' is a genus of marine bacteria from the family of Aurantimonadaceae The ''Aurantimonadaceae'' are a small family of marine bacteria. Notable Species '' Aurantimonas coralicida'' causes a white plague in corals. '' Fulvimarina pelagi'' was isolated from seawater, and takes the form of nonmotile rods. ''Fulvimari .... References Hyphomicrobiales Bacteria genera {{Hyphomicrobiales-stub ...
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Fulvimarina
''Fulvimarina'' is a genus of bacteria from the family of Aurantimonadaceae The ''Aurantimonadaceae'' are a small family of marine bacteria. Notable Species '' Aurantimonas coralicida'' causes a white plague in corals. '' Fulvimarina pelagi'' was isolated from seawater, and takes the form of nonmotile rods. ''Fulvimari .... References Hyphomicrobiales Bacteria genera {{Hyphomicrobiales-stub ...
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Jiella (bacterium)
''Jiella'' is a genus of bacteria from the family of Aurantimonadaceae with one known species (''Jiella aquimaris ''Jiella aquimaris'' is a Gram-negative, strictly aerobic, rod-shaped and motile from the genus of '' Jiella'' which has been isolated from seawater from the East China Sea The East China Sea is an arm of the Western Pacific Ocean, loca ...''). References Monotypic bacteria genera Hyphomicrobiales Bacteria genera {{Hyphomicrobiales-stub ...
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Aurantimonas
''Aurantimonas'' is a genus of bacteria from the family of Aurantimonadaceae The ''Aurantimonadaceae'' are a small family of marine bacteria. Notable Species '' Aurantimonas coralicida'' causes a white plague in corals. '' Fulvimarina pelagi'' was isolated from seawater, and takes the form of nonmotile rods. ''Fulvimari .... References Hyphomicrobiales Bacteria genera {{Hyphomicrobiales-stub ...
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Devosiaceae
''Devosiaceae'' is a family of Alphaproteobacteria. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy Taxonomy is the practice and science of categorization or classification. A taxonomy (or taxonomical ... (LPSN). The phylogeny is based on whole-genome analysis. References Hyphomicrobiales Bacteria families {{Hyphomicrobiales-stub ...
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-monas
The suffix -monas is used in microbiology for many genera and is intended to mean "unicellular organism". Meaning The suffix -monas found in many genera in microbiology is similar in usage to -bacter, -bacillus, -coccus or -spirillum. The genera with the suffix are not a monophyletic group and the suffix is chosen over -bacter, often simply out of stylistic preferences to match with Greek words. The first genus to be given the suffix -monas was '' Pseudomonas'', a genus of gammaproteobacteria. The generic epithet ''Pseudomonas'' was coined by Walter Migula in 1894, who did not give an etymology.Migula, W. (1900) System der Bakterien, Vol. 2. Jena, Germany: Gustav Fischer. Since the 7th edition of Bergey's manual (=top authority in bacterial nomenclature), other authors have given the etymology to be: Greek (, false) and (, single unit or monad), which can mean "false unit". However, "false unit" conceptually does not make much sense, namely, it does not mean "an organism whi ...
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Aurantimonas Coralicida
''Aurantimonas coralicida'' is a gram-negative bacterium, and a causative agent of white plague in Caribbean corals. It is rod-shaped, with polar flagella. Description An obligate aerobe, ''A. coralicida'' obtains its nourishment chemoheterotrophically. It tests positive for oxidase and catalase, and contains carotenoid pigments, possibly to protect against solar radiation. Role in Disease ''A. coralicida'' is believed to be the causative agent of white plague, a disease of some corals. This was first described in 1995 in an epizootic in reefs in the Florida Keys. 17 of 43 coral species in the area were infected, and up to 38% of infected corals died. Genetics The type strain of ''A. coralicida'' is WP1T(=CIP 107386T =DSM 14790T), which was the original strain isolated. History ''A coralicida'' was originally isolated as the cause of white plague in coral in the Caribbean in 1998. In 2003, the 16S rRNA sequence of the bacterium was compared to other known sequences t ...
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Fulvimarina Pelagi
''Fulvimarina pelagi'' is a Gram-negative, strictly aerobic, non-motile bacteria from the genus of Fulvimarina which was isolated from sea water from the western Sargasso Sea.Deutsche Sammlung von Mikroorganismen und Zellkulturen The Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures GmbH (German: ''Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH''), located in Braunschweig, is a research infrastructure in th ...br>/ref> References External linksType strain of ''Fulvimarina pelagi'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Hyphomicrobiales Bacteria described in 2003 {{Hyphomicrobiales-stub ...
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Carotenoid
Carotenoids (), also called tetraterpenoids, are yellow, orange, and red organic pigments that are produced by plants and algae, as well as several bacteria, and fungi. Carotenoids give the characteristic color to pumpkins, carrots, parsnips, corn, tomatoes, canaries, flamingos, salmon, lobster, shrimp, and daffodils. Carotenoids can be produced from fats and other basic organic metabolic building blocks by all these organisms. It is also produced by endosymbiotic bacteria in whiteflies. Carotenoids from the diet are stored in the fatty tissues of animals, and exclusively carnivorous animals obtain the compounds from animal fat. In the human diet, absorption of carotenoids is improved when consumed with fat in a meal. Cooking carotenoid-containing vegetables in oil and shredding the vegetable both increase carotenoid bioavailability. There are over 1,100 known carotenoids which can be further categorized into two classes, xanthophylls (which contain oxygen) and carotenes (which ...
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Outgroup (cladistics)
In cladistics or phylogenetics, an outgroup is a more distantly related group of organisms that serves as a reference group when determining the evolutionary relationships of the ingroup, the set of organisms under study, and is distinct from sociological outgroups. The outgroup is used as a point of comparison for the ingroup and specifically allows for the phylogeny to be rooted. Because the polarity (direction) of character change can be determined only on a rooted phylogeny, the choice of outgroup is essential for understanding the evolution of traits along a phylogeny. History Although the concept of outgroups has been in use from the earliest days of cladistics, the term "outgroup" is thought to have been coined in the early 1970s at the American Museum of Natural History. Prior to the advent of the term, various other terms were used by evolutionary biologists, including "exgroup", "related group", and "outside groups". Choice of outgroup The chosen outgroup is hypothe ...
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Bacterial Taxonomy
Bacterial taxonomy is the taxonomy, i.e. the rank-based classification, of bacteria. In the scientific classification established by Carl Linnaeus, each species has to be assigned to a genus ( binary nomenclature), which in turn is a lower level of a hierarchy of ranks (family, suborder, order, subclass, class, division/phyla, kingdom and domain). In the currently accepted classification of life, there are three domains (Eukaryotes, Bacteria and Archaea), which, in terms of taxonomy, despite following the same principles have several different conventions between them and between their subdivisions as they are studied by different disciplines (botany, zoology, mycology and microbiology). For example, in zoology there are type specimens, whereas in microbiology there are type strains. Diversity Prokaryotes share many common features, such as lack of nuclear membrane, unicellularity, division by binary-fission and generally small size. The various species differ amongst each o ...
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Ancient Greek Language
Ancient Greek includes the forms of the Greek language used in ancient Greece and the ancient world from around 1500 BC to 300 BC. It is often roughly divided into the following periods: Mycenaean Greek (), Dark Ages (), the Archaic period (), and the Classical period (). Ancient Greek was the language of Homer and of fifth-century Athenian historians, playwrights, and philosophers. It has contributed many words to English vocabulary and has been a standard subject of study in educational institutions of the Western world since the Renaissance. This article primarily contains information about the Epic and Classical periods of the language. From the Hellenistic period (), Ancient Greek was followed by Koine Greek, which is regarded as a separate historical stage, although its earliest form closely resembles Attic Greek and its latest form approaches Medieval Greek. There were several regional dialects of Ancient Greek, of which Attic Greek developed into Koine. ...
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