Vermilacinia Flaccescens
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''Vermilacinia'', a
genus Genus (; : genera ) is a taxonomic rank above species and below family (taxonomy), family as used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In bino ...
of
lichenized fungi A lichen ( , ) is a hybrid colony (biology), colony of algae or cyanobacteria living symbiotically among hypha, filaments of multiple fungus species, along with yeasts and bacteria embedded in the cortex or "skin", in a mutualism (biology), m ...
in the family
Ramalinaceae The Ramalinaceae are a family of lichen-forming fungi in the order Lecanorales. First proposed by Carl Adolph Agardh in 1821, the family now comprises 63 genera and about 750 species. Ramalinaceae lichens exhibit diverse growth forms, includin ...
, is a yellow-green
fruticose A fruticose lichen is a form of lichen fungi that is characterized by a coral-like shrubby or bushy lichen growth forms, growth structure. It is formed from a symbiotic relationship of a photobiont such as green algae or less commonly cyanobacteri ...
type of
lichen A lichen ( , ) is a hybrid colony (biology), colony of algae or cyanobacteria living symbiotically among hypha, filaments of multiple fungus species, along with yeasts and bacteria embedded in the cortex or "skin", in a mutualism (biology), m ...
with about 30 species that grow on rocks, trees, and soil within the fog zone along the Pacific Coast of North America and South America.Spjut, R. W. ''Niebla'' and ''Vermilacinia'' (Ramalinaceae) from California and Baja California. Sida Miscellany 14 The genus name refers to the
thallus Thallus (: thalli), from Latinized Greek (), meaning "a green shoot" or "twig", is the vegetative tissue of some organisms in diverse groups such as algae, fungi, some liverworts, lichens, and the Myxogastria. A thallus usually names the entir ...
being divided into narrow worm-like (vermis) branches (lacinia);the latter part of the name (lacinia) generally applied in descriptions and taxonomic keys such as exemplified in a key to
Sonoran Desert The Sonoran Desert () is a hot desert and ecoregion in North America that covers the northwestern Mexican states of Sonora, Baja California, and Baja California Sur, as well as part of the Southwestern United States (in Arizona and California). It ...
species of ''
Ramalina ''Ramalina'' is a genus of greenish fruticose lichens that grow in the form of flattened, strap-like branches. Members of the genus are commonly called strap lichensField Guide to California Lichens, Stephen Sharnoff, Yale University Press, 201 ...
''. The species of ''Vermilacinia'' are classified in two subgenera: subgenus ''Cylindricaria'' and subgenus ''Vermilacinia''. Subgenus ''Cylindricaria'', which includes 10+ species (type: ''Vermilacinia corrugata'' Spjut) that grow mostly on shrubs, is distinguished by a thin membranous pliable cortex (an outer skin-like layer composed of gelatinized hyphal cells) that expands as the thallus imbibes moisture, usually from fog, and shrinks upon drying (as fog dissipates). Subgenus ''Vermilacinia'', which includes 20 species (type: same as for the genus: ''Vermilacinia combeoides'' (Nyl.) Spjut & Hale) that grow on rocks (
saxicolous This glossary of mycology is a list of definitions of terms and concepts relevant to mycology, the study of fungi. Terms in common with other fields, if repeated here, generally focus on their mycology-specific meaning. Related terms can be found ...
) and soil (
terricolous A terricolous lichen is a lichen that grows on the soil as a substrate. Examples include some members of the genus Genus (; : genera ) is a taxonomic rank above species and below family (taxonomy), family as used in the biological classificati ...
), is distinguished by a relatively thick crusty cortex (like a dry pie crust) overlying a
medulla Medulla (Latin for "marrow") or medullary may refer to: Science * Medulla oblongata, a part of the brain stem * Renal medulla, a part of the kidney * Adrenal medulla, a part of the adrenal gland * Medulla of ovary, a stroma in the center of the ...
with rigid lattice of
hypha A hypha (; ) is a long, branching, filamentous structure of a fungus, oomycete, or actinobacterium. In most fungi, hyphae are the main mode of vegetative growth, and are collectively called a mycelium. Structure A hypha consists of one o ...
e.Spjut, R. W. 1995. ''Vermilacinia'' (Ramalinaceae, Lecanorales), a new genus of lichens. In: Flechten Follmann; Contr. Lichen in honor of Gerhard Follmann; F. J. A. Daniels, M. Schulz & J. Peine, eds., Koeltz Scientific Books: Koenigstein, pp. 337–351. The firmer cortex of subgenus ''Vermilacinia'' undoubtedly adds support to the thallus that allows its branches to grow upright from the substrate. '' Niebla'' and ''Ramalina'' are related genera distinguished by the hyphae forming multiple longitudinal gelatinized cords (chondroid stands), within the medulla. In many species of ''Ramalina'' they form a network interconnected with the lower cortex and medulla, in contrast to a uniform lattice or a single central cord in the ''Vermilacinia'' medulla. Also, both ''Niebla'' and ''Vermilacinia'' have been included in ''Ramalina'', which is distinguished by the pale
pycnidia A pycnidium (plural pycnidia) is an asexual fruiting body produced by mitosporic fungi, for instance in the order Sphaeropsidales ( Deuteromycota, Coelomycetes) or order Pleosporales (Ascomycota, Dothideomycetes). It is often spherical or inve ...
, the presence of
pseudocyphellae Pseudocyphellae (singular ''pseudocyphella'') are structures in lichens that appear as tiny pores on the outer surface (the cortex) of the lichen. They are caused when there is a break in the cortex of the lichen, and the medullary hyphae extend ...
, by the absence of the
diterpene Diterpenes are a class of terpenes composed of four isoprene units, often with the molecular formula C20H32. They are biosynthesized by plants, animals and fungi via the HMG-CoA reductase pathway, with geranylgeranyl pyrophosphate being a primary ...
(−)-16 α-hydroxykaurane, and by the absence of the triterpene zeorin, in most species. ''Vermilacinia'' is also unique in the Ramalinaceae for producing the diterpene (−)-16 α-hydroxykaurane (common in nonlichen fungi)Enzien, M. and L. Margulis. 1988. ''Niebla ceruchis'' from Laguna Figueroa: dimorphic spore morphology and secondary compounds localized in pycnidia and apothecia. Microbios 55:75–83. among other lichen substances, notably zeorin and bourgeanic acid; depsidones are frequently present as accessory substances. The diterpene is found in all species of subgenus ''Vermilacinia'' and in most species of subgenus ''Cylindricaria''. Exceptions are two North American species
endemic Endemism is the state of a species being found only in a single defined geographic location, such as an island, state, nation, country or other defined zone; organisms that are indigenous to a place are not endemic to it if they are also foun ...
to
Baja California Baja California, officially the Free and Sovereign State of Baja California, is a state in Mexico. It is the northwesternmost of the 32 federal entities of Mexico. Before becoming a state in 1952, the area was known as the North Territory of B ...
that only contain zeorin, or appearing deficient in lichen substances, although
usnic acid Usnic acid is a naturally occurring dibenzofuran derivative found in several lichen species with the formula C18H16O7. It was first isolated by German scientist W. Knop in 1844 and first synthesized between 1933 and 1937 by Frank H. Curd and Al ...
may be present in the cortex (''V. corrugata'', ''V. howei''). This diterpene, known also as ceruchdiol, G., J. Santesson & C. W. Wachtmeister. 1965. Studies on the chemistry of lichens. 20. The chemistry of the ''Ramalina ceruchis'' group. Acta Chem. Scand. 19:1185–1187. or ceruchinol,, Follmann, G. 1966. Eine neue ''Ramalina''-Art uas der Ceruches-Gruppe. Willdenowia 4: 225–233. has been attributed to cause a
mildew Mildew is a form of fungus. It is distinguished from its closely related counterpart, mold, largely by its colour: molds appear in shades of black, blue, red, and green, whereas mildew is white. It appears as a thin, superficial growth consisti ...
-like appearance that develops gradually on
herbarium A herbarium (plural: herbaria) is a collection of preserved plant biological specimen, specimens and associated data used for scientific study. The specimens may be whole plants or plant parts; these will usually be in dried form mounted on a sh ...
specimens. The thallus structure in some specimens collected more than 100 years ago is not discernible, making it difficult to determine whether or not
soredia Soredia are common reproduction, reproductive structures of lichens. Lichens asexual reproduction, reproduce asexually by employing simple fragmentation and production of soredia and isidia. Soredia are powdery propagules composed of fungus, fung ...
are present, which is necessary for species identification. The mold-like appearance is the result of
efflorescence In chemistry, efflorescence (Derived from the Latin verb 'efflorescere' roughly meaning 'to flower') is the migration of a salt to the surface of a porous material, where it forms a coating. The essential process involves the dissolving of an i ...
—a chemical change associated with the breakdown of the cortex from which the internal (medulla) hyphae erupt. Efflorescence can be slowed or prevented by storing specimens in a frost-free refrigerator below 40 °F, although there may be a trade-off in that long-term storage causes the cortex to become brittle over time (nine yrs). Not all species of ''Vermilacinia'' that produce the diterpene exhibit efflorescence. The presence or absence of this condition has also been referred to in the literature as "deposit" and "no deposit". For example, Gerd Bendz, Johan Santesson and Carl Wachtmeister reported on two specimens of ''Ramalina homalea'' (=''Niebla homalea'') with the diterpene that were collected in 1874, one with "deposit", the other without "deposit"; however, it was not clear as to how their specimens were identified to species. In this case the taxonomy was probably based on R. Heber Howe. The presence of divaricatic acid noted in the one specimen to have the deposit included reference to Mason E Hale Jr., ''Lichen Handbook''. Although one of the two specimens was probably ''Vermilacinia laevigata'', the
chemotype A chemotype (sometimes chemovar) is a chemically distinct entity in a plant or microorganism, with differences in the composition of the secondary metabolites. Minor genetic and epigenetic changes with little or no effect on morphology or anatomy ...
s appear incorrectly reported as generally recognized for the species now known as ''Niebla homalea'', which does not produce the diterpene. The same chemical data for ''Ramalina homalea'' were also reported by Gerhard Follmann, which again appear to include misidentifications for other lichen substances, without accounting for type specimens. Additionally, no reference was made to
zeorin Zeorin is a triterpene with the molecular formula C30H52O2 which occurs in many lichens A lichen ( , ) is a hybrid colony (biology), colony of algae or cyanobacteria living symbiotically among hypha, filaments of multiple fungus species, al ...
being present; the reported presence of
stictic acid Stictic acid is an aromatic organic compound, a product of secondary metabolism in some species of lichens. Stictic acid is the subject of preliminary biomedical research. Stictic acid has cytotoxic and apoptotic effects ''in vitro ''In v ...
was likely a misidentification for
salazinic acid Salazinic acid is a depsidone with a lactone ring. It is found in some lichens, and is especially prevalent in ''Parmotrema'' and '' Bulbothrix'', where its presence or absence is often used to help classify species in those genera. History In ...
and that of
atranorin Atranorin is a chemical substance produced by some species of lichen. It is a secondary metabolite belonging to a group of compounds known as depsides. Atranorin has analgesic, anti-inflammatory, antibacterial, antifungal, cytotoxic, antioxidant, ...
a misidentification of
usnic acid Usnic acid is a naturally occurring dibenzofuran derivative found in several lichen species with the formula C18H16O7. It was first isolated by German scientist W. Knop in 1844 and first synthesized between 1933 and 1937 by Frank H. Curd and Al ...
. The mold-like condition (“deposit”) has been associated with the occurrence of an unknown terpene ("T3"), which may be related to bourgeanic acid. The "Ceruchis-Group", which was defined by Gerhard Follmann by the presence (−)-16 α-hydroxykaurane, included species subsequently classified by Peter Bowler in three groups within the genus ''Niebla'' (1) ''N. homalea'', (2) ''N. combeoides'', and (3) ''N. ceruchis''.Bowler, P.A. 1981. Cortical diversity in the Ramalinaceae. Can. J. Bot. 59: 437–453. The first two groups are generally recognized to grow on rocks, the third group (''N. ceruchis'') on trees and shrubs; however, the type for the species in the “''Niebla ceruchis'' group” is one that grows on sand and rock; the type compares closely to specimens that lack a holdfast, as might be expected for thalli growing on soil. A specimen collected by Charles Darwin was noted by him to have been found at "
Iquique Iquique () is a port List of cities in Chile, city and Communes of Chile, commune in northern Chile, capital of both the Iquique Province and Tarapacá Region. It lies on the Pacific coast, west of the Pampa del Tamarugal, which is part of the At ...
, 2,000 to 3,000 ft high, where clouds often hang, lying without adhesion on bare sand ... through the coast mountains, no other plant on the coast for 16
league League or The League may refer to: Arts and entertainment * ''Leagues'' (band), an American rock band * ''The League'', an American sitcom broadcast on FX and FXX about fantasy football * ''League of Legends'', a 2009 multiplayer online battle a ...
s inward" (Taylor Herbarium within the Farlow Herbarium, Harvard University. ''Vermilacinia ceruchis'' was described to have a cortex 75–125
microns The micrometre (English in the Commonwealth of Nations, Commonwealth English as used by the International Bureau of Weights and Measures; SI symbol: μm) or micrometer (American English), also commonly known by the non-SI term micron, is a uni ...
thick, to lack apothecia, and to contain three characteristic terpenes of the ''N. combeoides'' group, described by Peter Bowler to have a thick cortex up to 200+ microns, in contrast to the
corticolous lichen A corticolous lichen is a lichen that grows on bark.Alan Silverside's Lichen Glossary (a-f), Alan Silverside/ref> This is contrasted with lignicolous lichen, which grows on wood that has had the bark stripped from it,Alan Silverside's Lichen Glo ...
species, not more than 60 microns thick. There seems to be no disagreement on the morphological differences between the corticolous and saxicolous groups, only a lack of applying the appropriate types to the names, according to the
International Code of Botanical Nomenclature The ''International Code of Nomenclature for algae, fungi, and plants'' (ICN or ICNafp) is the set of rules and recommendations dealing with the formal botanical names that are given to plants, fungi and a few other groups of organisms, all tho ...
. Despite the continued reports indicating that ''Niebla ceruchis'', which is a synonym of ''Vermilacinia ceruchis,'' to occur on shrubs and trees in North America, it does not occur in North America. ''Vermilacinia ceruchis'' is endemic to South America, and may be extinct. The South America species of
subgenus In biology, a subgenus ( subgenera) is a taxonomic rank directly below genus. In the International Code of Zoological Nomenclature, a subgeneric name can be used independently or included in a species name, in parentheses, placed between the ge ...
''Cylindricaria'' often differ from the North American species by containing methyl 3,5-dichlorolecanorate, also known as tumidulin. This was made in reference to the compound having allegedly been discovered in ''Ramalina ceruchis'' var. ''tumidula'' (
basionym In the scientific name of organisms, basionym or basyonym means the original name on which a new name is based; the author citation of the new name should include the authors of the basionym in parentheses. The term "basionym" is used in both botan ...
''Usnea tumidula'');Huneck, S. and G. Follmann. 1965. Zur Chemie chilenischer Flechtern XVI. Über die Inhaltasstoffe von ''Ramalina ceruchis'' (ACH.) DE NOT. var. ''tumidula'' (TAYL.) NYL Zeitschrift für Naturforschung 20b(6): 611–612. However, the type specimen does not contain this compound. The references to the material from which the compound was isolated include a figure showing thalli growing on a cactus, ''Eulychnia acida'', not on sand or rock. The report of lichen substances being present in species—without reference to type specimens—has led to considerable confusion. Many specimens of ''Vermilacinia'' in the United States National Herbarium (Smithsonian Institution, Department of Botany)—annotated by species names in the genus ''Niebla'' collected in North America—were erroneously reported to contain methyl 3,5-dichlorolecanorate, which may have been deduced from the previous erroneous reports mentioned above; the compound in question appears to be unknown, T3.


Species

The following are species in the genus ''Vermilacinia'' according to their classification in subgenera. Subgenus ''Vermilacinia'' *'' Vermilacinia acicularis'' *'' Vermilacinia cedrosensis'' *'' Vermilacinia ceruchis'' *'' Vermilacinia ceruchoides'' *'' Vermilacinia combeoides'' *'' Vermilacinia johncassadyi'' *'' Vermilacinia laevigata'' *'' Vermilacinia ligulata'' *'' Vermilacinia paleoderma'' *'' Vermilacinia polymorpha'' *'' Vermilacinia procera'' *'' Vermilacinia pumila'' *'' Vermilacinia reptilioderma'' *'' Vermilacinia rigida'' *'' Vermilacinia robusta'' *'' Vermilacinia rosei'' *'' Vermilacinia tuberculata'' *'' Vermilacinia varicosa'' *'' Vermilacinia vesiculosa'' Subgenus ''Cylindricaria'' *'' Vermilacinia cephalota'' *'' Vermilacinia cerebra'' *'' Vermilacinia corrugata'' *'' Vermilacinia flaccescens'' *''
Vermilacinia howei ''Vermilacinia howei'' is a fruticose lichen that grows on trees and shrubs in the fog regions along the Pacific Coast of North America in the coastal scrub region of the Channel Islands of California, and around Bahía de San Quintín, Baja Cal ...
'' *'' Vermilacinia leonis'' *'' Vermilacinia leopardina'' *'' Vermilacinia nylanderi'' *'' Vermilacinia tigrina'' *'' Vermilacinia zebrina''


References

{{Authority control Ramalinaceae Lichen genera Lecanorales genera Taxa named by Mason Hale Taxa described in 1995