''Treponema socranskii'' was isolated from
gum
Gum may refer to:
Types of gum
* Adhesive
* Bubble gum
* Chewing gum
* Gum (botany), sap or other resinous material associated with certain species of the plant kingdom
** Gum arabic, made from the sap of ''Acacia senegal'', an Old World tree s ...
swabs of people with
periodontitis
Periodontal disease, also known as gum disease, is a set of inflammatory conditions affecting the tissues surrounding the teeth. In its early stage, called gingivitis, the gums become swollen and red and may bleed. It is considered the main cau ...
and clinically-induced periodontitis.
It is a
motile
Motility is the ability of an organism to move independently, using metabolic energy.
Definitions
Motility, the ability of an organism to move independently, using metabolic energy, can be contrasted with sessility, the state of organisms th ...
,
helically coiled,
obligate anaerobe
Obligate anaerobes are microorganisms killed by normal atmospheric concentrations of oxygen (20.95% O2). Oxygen tolerance varies between species, with some species capable of surviving in up to 8% oxygen, while others lose viability in environm ...
that grows best at 37 °C, and is a novel member of its genus because of its ability to
ferment
Fermentation is a metabolic process that produces chemical changes in organic substrates through the action of enzymes. In biochemistry, it is narrowly defined as the extraction of energy from carbohydrates in the absence of oxygen. In food p ...
molecules that other ''Treponema'' species cannot.
''T. socranskii''’s growth is positively correlated with gingival
inflammation
Inflammation (from la, wikt:en:inflammatio#Latin, inflammatio) is part of the complex biological response of body tissues to harmful stimuli, such as pathogens, damaged cells, or Irritation, irritants, and is a protective response involving im ...
, which indicates that it is a leading cause of
gingivitis
Gingivitis is a non-destructive disease that causes inflammation of the gums. The most common form of gingivitis, and the most common form of periodontal disease overall, is in response to bacterial biofilms (also called plaque) that is attached ...
and periodontitis.
Discovery and isolation
Robert Smibert, John Johnson, and Richard Ranney isolated ''Treponema socranskii'' in Virginia, 1984.
Volunteers with
periodontitis
Periodontal disease, also known as gum disease, is a set of inflammatory conditions affecting the tissues surrounding the teeth. In its early stage, called gingivitis, the gums become swollen and red and may bleed. It is considered the main cau ...
and clinically-induced periodontitis supplied samples from beneath and above their
gumlines for comparison to samples supplied from volunteers with healthy gums.
The
culture
Culture () is an umbrella term which encompasses the social behavior, institutions, and norms found in human societies, as well as the knowledge, beliefs, arts, laws, customs, capabilities, and habits of the individuals in these grou ...
of ''T. socranskii'' were
isolated
Isolation is the near or complete lack of social contact by an individual.
Isolation or isolated may also refer to:
Sociology and psychology
*Isolation (health care), various measures taken to prevent contagious diseases from being spread
**Is ...
from the samples supplied from the group of volunteers with periodontitis and clinically-induced periodontitis.
Periodontitis is the lasting harmful
inflammation
Inflammation (from la, wikt:en:inflammatio#Latin, inflammatio) is part of the complex biological response of body tissues to harmful stimuli, such as pathogens, damaged cells, or Irritation, irritants, and is a protective response involving im ...
of the gum line, and clinically-induced periodontitis is the condition in which healthy volunteers stop dental
hygiene
Hygiene is a series of practices performed to preserve health.
According to the World Health Organization (WHO), "Hygiene refers to conditions and practices that help to maintain health and prevent the spread of diseases." Personal hygiene refer ...
to induce periodontitis for controlled scientific
study
Study or studies may refer to:
General
* Education
**Higher education
* Clinical trial
* Experiment
* Observational study
* Research
* Study skills, abilities and approaches applied to learning
Other
* Study (art), a drawing or series of drawin ...
.
Researchers used a
medium
Medium may refer to:
Science and technology
Aviation
*Medium bomber, a class of war plane
* Tecma Medium, a French hang glider design
Communication
* Media (communication), tools used to store and deliver information or data
* Medium of ...
that contained
meat and
salt water
Saline water (more commonly known as salt water) is water that contains a high concentration of dissolved salts (mainly sodium chloride). On the United States Geological Survey (USGS) salinity scale, saline water is saltier than brackish water, ...
that was saturated with
carbon dioxide
Carbon dioxide ( chemical formula ) is a chemical compound made up of molecules that each have one carbon atom covalently double bonded to two oxygen atoms. It is found in the gas state at room temperature. In the air, carbon dioxide is t ...
to purge the sample of
oxygen
Oxygen is the chemical element with the symbol O and atomic number 8. It is a member of the chalcogen group in the periodic table, a highly reactive nonmetal, and an oxidizing agent that readily forms oxides with most elements as we ...
.
These samples were cultured in duplicates on selective solid media plates after undergoing
serial dilution
A serial dilution is the stepwise dilution of a substance in solution. Usually the dilution factor at each step is constant, resulting in a geometric progression of the concentration in a logarithmic fashion. A ten-fold serial dilution could be ...
s to ensure purity.
These plates were placed into
GasPak jars to remove any oxygen that may be present in the jar.
The researchers
inoculated colonies
In modern parlance, a colony is a territory subject to a form of foreign rule. Though dominated by the foreign colonizers, colonies remain separate from the administration of the original country of the colonizers, the '' metropolitan state' ...
from the plates into OTI (oral treponeme isolation) broth and placed them into another GasPak jar.
The jars were kept at 37 °C, and every week the samples were checked using
dark-field microscopy
Dark-field microscopy (also called dark-ground microscopy) describes microscopy methods, in both light and electron microscopy, which exclude the unscattered beam from the image. As a result, the field around the specimen (i.e., where there is ...
.
Taxonomy
The taxonomic
lineage of ''Treponema socranskii'' is ''Bacteria'', ''Spirochaetes'', ''Spirochaetia'', ''Spirochaetales'', ''Spirochaetaceae'', ''Treponema'', ''socranskii''.
The
subspecies were named socranskii, buccale, and paredis.
''Treponema socranskii'' is unique to its
genus
Genus ( plural genera ) is a taxonomic rank used in the biological classification of living and fossil organisms as well as viruses. In the hierarchy of biological classification, genus comes above species and below family. In binomial n ...
due to the combination of a higher average
GC content
In molecular biology and genetics, GC-content (or guanine-cytosine content) is the percentage of nitrogenous bases in a DNA or RNA molecule that are either guanine (G) or cytosine (C). This measure indicates the proportion of G and C bases out of ...
and its lack of need for
serum
Serum may refer to:
*Serum (blood), plasma from which the clotting proteins have been removed
**Antiserum, blood serum with specific antibodies for passive immunity
* Serous fluid, any clear bodily fluid
* Truth serum, a drug that is likely to mak ...
in its growth media.
Three other species in the genus do not use serum, and have GC contents around 36-39 mol% whereas socranskii has a GC content of 50-52 mol%.
When compared to other cultured ''Treponema'' species:
''denticola'', ''pectinovorum'', and
''vincentii'', a major factor unique to ''socranskii'' is the ability to
ferment
Fermentation is a metabolic process that produces chemical changes in organic substrates through the action of enzymes. In biochemistry, it is narrowly defined as the extraction of energy from carbohydrates in the absence of oxygen. In food p ...
different molecules.
The RapID-ANA system, which is a series of qualitative tests used to identify different anaerobic bacteria, is widely used to distinguish between different
oral
The word oral may refer to:
Relating to the mouth
* Relating to the mouth, the first portion of the alimentary canal that primarily receives food and liquid
**Oral administration of medicines
** Oral examination (also known as an oral exam or ora ...
spirochetes.
This method distinguishes ''socranskii'' from other species because its only positive test is the
alkaline phosphatase test, while the other species are negative for this test.
Characterization
Optima
The characterization of this organism was done when it was first cultured in 1984.
T. s''ocranskii'' is an
obligate anaerobe
Obligate anaerobes are microorganisms killed by normal atmospheric concentrations of oxygen (20.95% O2). Oxygen tolerance varies between species, with some species capable of surviving in up to 8% oxygen, while others lose viability in environm ...
that grows in media that contains fermentable
carbohydrate
In organic chemistry, a carbohydrate () is a biomolecule consisting of carbon (C), hydrogen (H) and oxygen (O) atoms, usually with a hydrogen–oxygen atom ratio of 2:1 (as in water) and thus with the empirical formula (where ''m'' may or ...
s.
The media must also contain
liquid
A liquid is a nearly incompressible fluid that conforms to the shape of its container but retains a (nearly) constant volume independent of pressure. As such, it is one of the four fundamental states of matter (the others being solid, gas, an ...
from an unspecified
rumen
The rumen, also known as a paunch, is the largest stomach compartment in ruminants and the larger part of the reticulorumen, which is the first chamber in the alimentary canal of ruminant animals. The rumen's microbial favoring environment allow ...
or
short chain fatty acids.
The preferred
temperature
Temperature is a physical quantity that expresses quantitatively the perceptions of hotness and coldness. Temperature is measured with a thermometer.
Thermometers are calibrated in various temperature scales that historically have relied on ...
for ''T. socranskii'' is 37 °C, but it will still slightly grow between 25 °C and 42 °C.
Morphology
''Treponema socranskii'' is
helically coiled and
motile
Motility is the ability of an organism to move independently, using metabolic energy.
Definitions
Motility, the ability of an organism to move independently, using metabolic energy, can be contrasted with sessility, the state of organisms th ...
using periplasmic
flagella
A flagellum (; ) is a hairlike appendage that protrudes from certain plant and animal sperm cells, and from a wide range of microorganisms to provide motility. Many protists with flagella are termed as flagellates.
A microorganism may have f ...
.
In liquid media, it can move
linearly or in a twisting screw-like motion.
The cell size ranges from 6-15μm long and 0.16-0.18μm wide.
The cells are wider in the center than at the ends and are curved slightly.
When plated, colonies of ''T. socranskii'' form between 7–10 days after inoculation and appear white,
translucent
In the field of optics, transparency (also called pellucidity or diaphaneity) is the physical property of allowing light to pass through the material without appreciable scattering of light. On a macroscopic scale (one in which the dimensions ...
, irregular, with a dense center.
Ecology
''Treponema socranskii'' is found in the space between the teeth and gums of patients with the varying forms of periodontitis.
Of the samples taken from across sampling sites of the gum line, ''T. socranskii'' is found to be one of the most abundant of its genus.
Studies on the human oral microbiome show that
Gram-negative
Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. They are characterized by their cell envelopes, which are composed of a thin peptidoglycan cell wa ...
organisms including genera ''Treponema'', ''
Prevotella
''Prevotella'' is a genus of Gram-negative bacteria.
''Prevotella'' spp. are members of the oral, vaginal, and gut microbiota and are often recovered from anaerobic infections of the respiratory tract. These infections include aspiration pn ...
'', ''
Selenomonas
Members of the genus ''Selenomonas'' (motile crescent-shaped bacteria in general) are referred to trivially as selenomonads. The genus ''Selenomonas'' constitutes a group of motile crescent-shaped bacteria and includes species living in the gast ...
'', ''Tannerella'', ''
Haemophilus
''Haemophilus'' is a genus of Gram-negative, pleomorphic, coccobacilli bacteria belonging to the family Pasteurellaceae. While ''Haemophilus'' bacteria are typically small coccobacilli, they are categorized as pleomorphic bacteria because of ...
'', and ''Catonella'' are not only present in samples from those with periodontitis, but they are actually
selected for and have a much higher
abundance than healthy samples.
After treatment of periodontitis, there is a shift in the microbial community away from the Gram-negative organisms listed above, and selection for
Gram-positive
In bacteriology, gram-positive bacteria are bacteria that give a positive result in the Gram stain test, which is traditionally used to quickly classify bacteria into two broad categories according to their type of cell wall.
Gram-positive bac ...
organisms.
Healthy gumlines tend to be characterized by a low
diversity of microorganisms within a single patient, but the
taxa
In biology, a taxon ( back-formation from '' taxonomy''; plural taxa) is a group of one or more populations of an organism or organisms seen by taxonomists to form a unit. Although neither is required, a taxon is usually known by a particular n ...
vary greatly across different individuals.
Individuals with periodontitis have a high diversity of microbes, but the
community structure
In the study of complex networks, a network is said to have community structure if the nodes of the network can be easily grouped into (potentially overlapping) sets of nodes such that each set of nodes is densely connected internally. In the par ...
is similar in all affected patients.
These trends are due to the anaerobic and
oligotroph
An oligotroph is an organism that can live in an environment that offers very low levels of nutrients. They may be contrasted with copiotrophs, which prefer nutritionally rich environments. Oligotrophs are characterized by slow growth, low rates o ...
ic conditions in the diseased gums causing the anaerobic bacteria to be able to out
compete
Competition is a rivalry where two or more parties strive for a common goal which cannot be shared: where one's gain is the other's loss (an example of which is a zero-sum game). Competition can arise between entities such as organisms, indivi ...
the aerobic copiotrophs that usually make up the healthy communities.
Metabolism
''Treponema socranskii'' differs from others in the genus due, in part, to its
metabolism
Metabolism (, from el, μεταβολή ''metabolē'', "change") is the set of life-sustaining chemical reactions in organisms. The three main functions of metabolism are: the conversion of the energy in food to energy available to run c ...
.
''T. socranskii'' is able to ferment compounds that others are not able to do so.
The compounds that it can metabolize are
arabinose
Arabinose is an aldopentose – a monosaccharide containing five carbon atoms, and including an aldehyde (CHO) functional group.
For biosynthetic reasons, most saccharides are almost always more abundant in nature as the "D"-form, or structural ...
,
dextrin
Dextrins are a group of low-molecular-weight carbohydrates produced by the hydrolysis of starch and glycogen. Dextrins are mixtures of polymers of D-glucose units linked by α-(1→4) or α-(1→6) glycosidic bonds.
Dextrins can be produced from ...
,
fructose
Fructose, or fruit sugar, is a ketonic simple sugar found in many plants, where it is often bonded to glucose to form the disaccharide sucrose. It is one of the three dietary monosaccharides, along with glucose and galactose, that are absorb ...
,
galactose
Galactose (, '' galacto-'' + '' -ose'', "milk sugar"), sometimes abbreviated Gal, is a monosaccharide sugar that is about as sweet as glucose, and about 65% as sweet as sucrose. It is an aldohexose and a C-4 epimer of glucose. A galactose molec ...
,
glucose
Glucose is a simple sugar with the molecular formula . Glucose is overall the most abundant monosaccharide, a subcategory of carbohydrates. Glucose is mainly made by plants and most algae during photosynthesis from water and carbon dioxide, usi ...
,
glycogen
Glycogen is a multibranched polysaccharide of glucose that serves as a form of energy storage in animals, fungi, and bacteria. The polysaccharide structure represents the main storage form of glucose in the body.
Glycogen functions as one o ...
,
maltose
}
Maltose ( or ), also known as maltobiose or malt sugar, is a disaccharide formed from two units of glucose joined with an α(1→4) bond. In the isomer isomaltose, the two glucose molecules are joined with an α(1→6) bond. Maltose is the tw ...
,
mannose
Mannose is a sugar monomer of the aldohexose series of carbohydrates. It is a C-2 epimer of glucose. Mannose is important in human metabolism, especially in the glycosylation of certain proteins. Several congenital disorders of glycosylation a ...
,
pectin
Pectin ( grc, πηκτικός ': "congealed" and "curdled") is a heteropolysaccharide, a structural acid contained in the primary lamella, in the middle lamella, and in the cell walls of terrestrial plants. The principal, chemical component o ...
,
raffinose
Raffinose is a trisaccharide composed of galactose, glucose, and fructose. It can be found in beans, cabbage, brussels sprouts, broccoli, asparagus, other vegetables, and whole grains. Raffinose can be hydrolyzed to D-galactose and sucrose b ...
,
rhamnose
Rhamnose (Rha, Rham) is a naturally occurring deoxy sugar. It can be classified as either a methyl- pentose or a 6-deoxy- hexose. Rhamnose predominantly occurs in nature in its L-form as L-rhamnose (6-deoxy-L- mannose). This is unusual, since mo ...
,
ribose
Ribose is a simple sugar and carbohydrate with molecular formula C5H10O5 and the linear-form composition H−(C=O)−(CHOH)4−H. The naturally-occurring form, , is a component of the ribonucleotides from which RNA is built, and so this compou ...
,
starch
Starch or amylum is a polymeric carbohydrate consisting of numerous glucose units joined by glycosidic bonds. This polysaccharide is produced by most green plants for energy storage. Worldwide, it is the most common carbohydrate in human diets ...
,
sucrose
Sucrose, a disaccharide, is a sugar composed of glucose and fructose subunits. It is produced naturally in plants and is the main constituent of white sugar. It has the molecular formula .
For human consumption, sucrose is extracted and refi ...
,
trehalose
Trehalose (from Turkish '' tıgala'' – a sugar derived from insect cocoons + -ose) is a sugar consisting of two molecules of glucose. It is also known as mycose or tremalose. Some bacteria, fungi, plants and invertebrate animals synthesize it ...
, and
xylose
Xylose ( grc, ξύλον, , "wood") is a sugar first isolated from wood, and named for it. Xylose is classified as a monosaccharide of the aldopentose type, which means that it contains five carbon atoms and includes an aldehyde functional gro ...
.
The fermentation products are
acetic
Acetic acid , systematically named ethanoic acid , is an acidic, colourless liquid and organic compound with the chemical formula (also written as , , or ). Vinegar is at least 4% acetic acid by volume, making acetic acid the main component ...
,
lactic, and
succinic acid
Succinic acid () is a dicarboxylic acid with the chemical formula (CH2)2(CO2H)2. The name derives from Latin ''succinum'', meaning amber. In living organisms, succinic acid takes the form of an anion, succinate, which has multiple biological r ...
, with
formic acid
Formic acid (), systematically named methanoic acid, is the simplest carboxylic acid, and has the chemical formula HCOOH and structure . It is an important intermediate in chemical synthesis and occurs naturally, most notably in some ants. Est ...
as a minor product.
Genomics
The
genome
In the fields of molecular biology and genetics, a genome is all the genetic information of an organism. It consists of nucleotide sequences of DNA (or RNA in RNA viruses). The nuclear genome includes protein-coding genes and non-coding ...
of ''T. socranskii'' was
sequenced
In genetics and biochemistry, sequencing means to determine the primary structure (sometimes incorrectly called the primary sequence) of an unbranched biopolymer. Sequencing results in a symbolic linear depiction known as a sequence which succi ...
by the
J. Craig Venter Institute
The J. Craig Venter Institute (JCVI) is a non-profit genomics research institute founded by J. Craig Venter, Ph.D. in October 2006. The institute was the result of consolidating four organizations: the Center for the Advancement of G ...
(JCVI) using
Illumina sequencing.
The genome contains 2,804,628
base pairs of which 2,547,778 are
coding pairs.
The
GC content
In molecular biology and genetics, GC-content (or guanine-cytosine content) is the percentage of nitrogenous bases in a DNA or RNA molecule that are either guanine (G) or cytosine (C). This measure indicates the proportion of G and C bases out of ...
is between 50-52 mol%.
The DNA also contains 2563 genes of which 2509 code for
protein
Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, respon ...
s.
Implications
''Treponema socranskii'' and 11 other organisms show an increased growth rate that correlates with an increased GI (gingival index) score.
The GI score measures the intensity of the inflammation of the gingival crevice.
This correlation between growth and high GI scores, combined with the frequency of ''T. socranskii'' in the
gingival crevice of people with clinically-induced periodontitis and moderate/severe periodontitis has implications that point toward ''T. socranskii'' being a
causative agent
In biology, a pathogen ( el, πάθος, "suffering", "passion" and , "producer of") in the oldest and broadest sense, is any organism or agent that can produce disease. A pathogen may also be referred to as an infectious agent, or simply a ger ...
in periodontitis and gingivitis.
Periodontitis is the condition that arises after leaving gingivitis untreated.
In adults, periodontitis can be a major force in the acceleration of
tooth loss Tooth loss is a process in which one or more teeth come loose and fall out. Tooth loss is normal for deciduous teeth (baby teeth), when they are replaced by a person's adult teeth. Otherwise, losing teeth is undesirable and is the result of inju ...
because it damages the base of the teeth and harms their connection to the
skull
The skull is a bone protective cavity for the brain. The skull is composed of four types of bone i.e., cranial bones, facial bones, ear ossicles and hyoid bone. However two parts are more prominent: the cranium and the mandible. In humans, t ...
.
This condition is easily prevented by daily dental hygiene such as
brushing and
flossing
Dental floss is a cord of thin filaments used in interdental cleaning to remove food and dental plaque from between teeth or places a toothbrush has difficulty reaching or is unable to reach. Its regular use as part of oral cleaning is designed ...
.
References
{{Taxonbar, from=Q24975387
socranskii
Bacteria described in 1984