Sulfur isotope
biogeochemistry
Biogeochemistry is the Branches of science, scientific discipline that involves the study of the chemistry, chemical, physics, physical, geology, geological, and biology, biological processes and reactions that govern the composition of the natu ...
is the study of the distribution of
sulfur isotopes in biological and geological materials. In addition to its common isotope,
32S, sulfur has three rare stable isotopes:
34S,
36S, and
33S. The distribution of these isotopes in the environment is controlled by many biochemical and physical processes, including biological metabolisms, mineral formation processes, and atmospheric chemistry. Measuring the abundance of sulfur stable isotopes in natural materials, like bacterial cultures, minerals, or seawater, can reveal information about these processes both in the modern environment and over Earth history.
Background
Natural abundance of sulfur isotopes
Sulfur
Sulfur ( American spelling and the preferred IUPAC name) or sulphur ( Commonwealth spelling) is a chemical element; it has symbol S and atomic number 16. It is abundant, multivalent and nonmetallic. Under normal conditions, sulfur atoms ...
has 24 known
isotope
Isotopes are distinct nuclear species (or ''nuclides'') of the same chemical element. They have the same atomic number (number of protons in their Atomic nucleus, nuclei) and position in the periodic table (and hence belong to the same chemica ...
s,
4 of which are
stable
A stable is a building in which working animals are kept, especially horses or oxen. The building is usually divided into stalls, and may include storage for equipment and feed.
Styles
There are many different types of stables in use tod ...
(meaning that they do not undergo
radioactive decay
Radioactive decay (also known as nuclear decay, radioactivity, radioactive disintegration, or nuclear disintegration) is the process by which an unstable atomic nucleus loses energy by radiation. A material containing unstable nuclei is conside ...
).
32S, the common isotope of sulfur, makes up 95.0% of the natural sulfur on Earth.
In the atomic symbol of
32S, the number 32 refers to the mass of each sulfur atom in
daltons, the result of the 16 protons and 16 neutrons of 1 dalton each that make up the sulfur nucleus. The three rare stable isotopes of sulfur are
34S (4.2% of natural sulfur),
33S (0.75%), and
36S (0.015%).
These isotopes differ from
32S in the number of
neutron
The neutron is a subatomic particle, symbol or , that has no electric charge, and a mass slightly greater than that of a proton. The Discovery of the neutron, neutron was discovered by James Chadwick in 1932, leading to the discovery of nucle ...
s in each atom, but not the number of
proton
A proton is a stable subatomic particle, symbol , Hydron (chemistry), H+, or 1H+ with a positive electric charge of +1 ''e'' (elementary charge). Its mass is slightly less than the mass of a neutron and approximately times the mass of an e ...
s or
electron
The electron (, or in nuclear reactions) is a subatomic particle with a negative one elementary charge, elementary electric charge. It is a fundamental particle that comprises the ordinary matter that makes up the universe, along with up qua ...
s; as a result, each isotope has a slightly different mass, but has nearly identical chemical properties.
Physical chemistry
Small differences in mass between stable isotopes of the same element can lead to a phenomenon called an "isotope effect," where heavier or lighter isotopes are preferentially incorporated into different natural materials depending on the materials' chemical composition or physical state.
Isotope effects are divided into two main groups:
kinetic isotope effect
In physical organic chemistry, a kinetic isotope effect (KIE) is the change in the reaction rate of a chemical reaction when one of the atoms in the reactants is replaced by one of its isotopes. Formally, it is the ratio of rate constants for t ...
s and
equilibrium isotope effects.
A kinetic isotope effect occurs when a reaction is irreversible, meaning that the reaction only proceeds in the direction from reactants to products.
Kinetic isotope effects cause
isotopic fractionation
Isotope fractionation describes fractionation processes that affect the relative abundance of isotopes, a phenomena that occurs (and so advantage is taken of it) in the study geochemistry, biochemistry, food science, and other fields. Normally, ...
—meaning that they affect the isotopic composition of reactant and product compounds—because the mass differences between stable isotopes can affect the rate of chemical reactions.
It takes more energy to reach the
transition state
In chemistry, the transition state of a chemical reaction is a particular configuration along the reaction coordinate. It is defined as the state corresponding to the highest potential energy along this reaction coordinate. It is often marked w ...
of a reaction if the compound has bonds with a heavier isotope, which causes the compound with heavier isotopes to react more slowly.
Normal kinetic isotope effects cause the lighter isotope (or isotopes) to be preferentially included in a reaction's product.
The products are then said to be "depleted" in the heavy isotope relative to the reactant.
Rarely, inverse kinetic isotope effects may occur, where the heavier isotope is preferentially included in a reaction's product.
Equilibrium isotope effects cause fractionation because it is more chemically favorable for heavy isotopes to take part in stronger bonds.
An equilibrium isotope effect occurs when a reaction is at equilibrium, meaning that the reaction is able to occur in both directions simultaneously.
When a reaction is at equilibrium, heavy isotopes will preferentially accumulate where they can form the strongest bonds.
For example, when the water in a sealed, half-full bottle is in equilibrium with the vapor above it, the heavier isotopes
2H and
18O will accumulate in the liquid, where they form stronger bonds, while the lighter isotopes
1H and
16O will accumulate in the vapor. The liquid is then said to be "enriched" in the heavy isotope relative to the vapor.
Calculations
Delta notation
Differences in the abundance of stable isotopes among natural materials are usually very small (natural differences in the ratio of rare to common isotope are almost always below 0.1%, and sometimes much smaller).
Nevertheless, these very small differences can record meaningful biological and geological processes. To facilitate comparison of these small but meaningful differences, isotope abundances in natural materials are often reported relative to isotope abundances in designated standards.
The convention for reporting the measured difference between a sample and a standard is called "delta notation." For example, imagine an element X for which we wish to compare the rare, heavy stable isotope with atomic mass A (
AX) to the light, common isotope with atomic mass B (
BX). The abundance of
AX and
BX in any given material is reported with the notation δ
AX. δ
AX for the sample material is calculated as follows:
:
AR = (total amount of
AX)/(total amount of
BX)
:δ
AX
sample = (
AR
sample −
AR
standard)/
AR
standard
δ values are most commonly reported in parts per thousand, commonly referred to in isotope chemistry as
per mille
The phrase per mille () indicates parts per thousand. The associated symbol is , similar to a per cent sign but with an extra zero in the division (mathematics), divisor.
Major dictionaries do not agree on the spelling, giving other options o ...
and represented by the symbol ‰. To report δ values in per mille, the δ value as calculated above should be multiplied by 1000:
:δ
AX
sample (‰) = ((
AR
sample −
AR
standard)/
AR
standard) * 1000
Fractionation factors
While an isotope effect is the physical tendency for stable isotopes to distribute in a particular way, the isotopic fractionation is the measurable result of this tendency.
The isotopic fractionation of a natural process can be calculated from measured isotope abundances. The calculated value is called a "fractionation factor," and allows the effect of different processes on isotope distributions to be mathematically compared.
For example, imagine a chemical reaction Reactant → Product. Reactant and Product are materials that both contain the element X, and X has two stable isotopes,
AX (the heavy isotope, with a mass of A) and
BX (the light isotope, with a mass of B). The fractionation factor for the element X in the reaction Reactant → Product is represented by the notation
:
Aα
Product/Reactant.
Aα
Product/Reactant is calculated as follows:
:
Aα
Product/Reactant = (δ
AX
Product + 1)/(δ
AX
Reactant + 1)
Fractionation factors can also be reported using the notation
Aε
Product/Reactant, which is sometimes called the "enrichment factor" and is calculated as follows:
:
Aε
Product/Reactant =
Aα
Product/Reactant − 1
Like δ values, ε values can be reported in per mille by multiplying by 1000.
Δ33S and Δ36S notation
All kinetic and equilibrium isotope effects result from differences in atomic mass.
As a result, a reaction that fractionates
34S will also fractionate
33S and
36S, and the fractionation factor for each isotope will be mathematically proportional to its mass.
Because of the mathematical relationships of their masses, the observed relationships between δ
34S, δ
33S, and δ
36S in most natural materials are approximately δ
33S = 0.515 × δ
34S and δ
36S = 1.90 × δ
34S. Rarely, natural processes can create deviations from this relationship, and these deviations are reported as Δ
33S and Δ
36S values, usually pronounced as "cap delta." These values are typically calculated as follows:
:Δ
33S = 1000 ×
33S/1000) − (1 + δ34S 1000)0.518 − 1">1 + δ33S/1000) − (1 + δ34S 1000)0.518 − 1
:Δ
36S = 1000 ×
36S/1000) − (1 + δ34S/1000)1.91 − 1">1 + δ36S/1000) − (1 + δ34S/1000)1.91 − 1
However, the method for calculating Δ
33S and Δ
36S values is not standardized, and can differ among publications.
Reference materials
Agreed-upon reference materials are required so that reported δ values are comparable among studies. For the sulfur isotope system, δ
34S values are reported on the Vienna-Cañon Diablo Troilite (VCDT) scale.
The original CDT scale was based on a sample of the mineral
troilite
Troilite () is a rare iron sulfide mineral with the simple formula of FeS. It is the iron-rich endmember of the pyrrhotite group. Pyrrhotite has the formula Fe(1−x)S (x = 0 to 0.2) which is iron deficient. As troilite lacks the iron deficiency ...
recovered from the
Canyon Diablo meteorite
The Canyon Diablo meteorite refers to the many fragments of the asteroid that created Meteor Crater (also called Barringer Crater), Arizona, United States. Meteorites have been found around the crater rim, and are named for nearby Canyon Diab ...
at
Meteor Crater
Meteor Crater, or Barringer Crater, is an impact crater about east of Flagstaff and west of Winslow in the desert of northern Arizona, United States. The site had several earlier names, and fragments of the meteorite are officially called ...
, Arizona, US.
The Cañon Diablo Troilite was assigned a δ
34S value of 0‰.
However, troilite from the Canyon Diablo meteorite was later discovered to have variable sulfur isotope composition. As a result, VCDT was established as a hypothetical sulfur isotope reference with a
34R value of 0.044151
and δ
34S of 0‰, but no physical sample of VCDT exists. Samples are now measured in comparison to
International Atomic Energy Agency
The International Atomic Energy Agency (IAEA) is an intergovernmental organization that seeks to promote the peaceful use of nuclear technology, nuclear energy and to inhibit its use for any military purpose, including nuclear weapons. It was ...
(IAEA) reference materials, which are well-characterized, lab-prepared compounds with known δ
34S values.
A commonly used IAEA reference material is IAEA-S-1, a silver sulfide reference material with a δ
34S value of −0.30‰ VCDT.
33S and
36S abundance can also be measured relative to IAEA reference materials and reported on the VCDT scale.
For these isotopes, too, VCDT is established as having δ
33S and δ
36S values of 0‰.
The
33R value of VCDT is 0.007877 and the
36R value is 0.0002.
IAEA-S-1 has a
33R value of 0.0007878 and a δ
33S value of −0.05‰ VCDT; it has a δ
36S value of −0.6‰ VCDT.
Analytical methods and instrumentation
The sulfur isotopic composition of natural samples can be determined by Elemental Analysis-Isotope Ratio Mass Spectrometry (EA-IRMS), by Dual Inlet-Isotope Ratio Mass Spectrometry (DI-IRMS), by Multi-Collector-Inductively Coupled Plasma Mass Spectrometry (MC-ICPMS), by
Secondary Ion Mass Spectrometry
Secondary-ion mass spectrometry (SIMS) is a technique used to analyze the composition of solid surfaces and thin films by sputtering the surface of the specimen with a focused primary ion beam and collecting and analyzing ejected secondary ions ...
(SIMS),
or by
Nanoscale secondary ion mass spectrometry NanoSIMS (nanoscale secondary ion mass spectrometry) is an analytical instrument manufactured by CAMECA which operates on the principle of secondary ion mass spectrometry. The NanoSIMS is used to acquire nanoscale resolution measurements of the ele ...
(NanoSIMS). MC-ICPMS can be paired with gas chromatography (GC-MC-ICPMS) to separate certain volatile compounds in a sample and measure the sulfur isotopic composition of individual compounds.
The sulfur isotopic compositions of
mineral
In geology and mineralogy, a mineral or mineral species is, broadly speaking, a solid substance with a fairly well-defined chemical composition and a specific crystal structure that occurs naturally in pure form.John P. Rafferty, ed. (2011): Mi ...
s and
porewater
Groundwater is the water present beneath Earth's surface in rock and soil pore spaces and in the fractures of rock formations. About 30 percent of all readily available fresh water in the world is groundwater. A unit of rock or an unconsolidate ...
in
sediment
Sediment is a solid material that is transported to a new location where it is deposited. It occurs naturally and, through the processes of weathering and erosion, is broken down and subsequently sediment transport, transported by the action of ...
are subject to accumulation and
diffusion
Diffusion is the net movement of anything (for example, atoms, ions, molecules, energy) generally from a region of higher concentration to a region of lower concentration. Diffusion is driven by a gradient in Gibbs free energy or chemical p ...
after burial.
Reactive transport models are often used to account for the effect of such physical processes and find out the isotopic effect of the process studied.
Natural variations in sulfur isotope abundance
Sulfur in natural materials

Sulfur is present in the environment in solids, gases, and aqueous species. Sulfur-containing solids on Earth include the common minerals
pyrite
The mineral pyrite ( ), or iron pyrite, also known as fool's gold, is an iron sulfide with the chemical formula Fe S2 (iron (II) disulfide). Pyrite is the most abundant sulfide mineral.
Pyrite's metallic luster and pale brass-yellow hue ...
(FeS
2),
galena
Galena, also called lead glance, is the natural mineral form of lead(II) sulfide (PbS). It is the most important ore of lead and an important source of silver.
Galena is one of the most abundant and widely distributed sulfide minerals. It crysta ...
(PbS), and
gypsum
Gypsum is a soft sulfate mineral composed of calcium sulfate Hydrate, dihydrate, with the chemical formula . It is widely mined and is used as a fertilizer and as the main constituent in many forms of plaster, drywall and blackboard or sidewalk ...
(CaSO
4•2H
2O). Sulfur is also an important component of biological material, including in the essential amino acids
cysteine
Cysteine (; symbol Cys or C) is a semiessential proteinogenic amino acid with the chemical formula, formula . The thiol side chain in cysteine enables the formation of Disulfide, disulfide bonds, and often participates in enzymatic reactions as ...
and
methionine
Methionine (symbol Met or M) () is an essential amino acid in humans.
As the precursor of other non-essential amino acids such as cysteine and taurine, versatile compounds such as SAM-e, and the important antioxidant glutathione, methionine play ...
, the B vitamins
thiamine
Thiamine, also known as thiamin and vitamin B1, is a vitamin – an Nutrient#Micronutrients, essential micronutrient for humans and animals. It is found in food and commercially synthesized to be a dietary supplement or medication. Phosp ...
and
biotin
Biotin (also known as vitamin B7 or vitamin H) is one of the B vitamins. It is involved in a wide range of metabolic processes, both in humans and in other organisms, primarily related to the utilization of fats, carbohydrates, and amino acids. ...
, and the ubiquitous substrate
coenzyme A
Coenzyme A (CoA, SHCoA, CoASH) is a coenzyme, notable for its role in the Fatty acid metabolism#Synthesis, synthesis and Fatty acid metabolism#.CE.B2-Oxidation, oxidation of fatty acids, and the oxidation of pyruvic acid, pyruvate in the citric ac ...
. In the ocean and other natural waters, sulfur is abundant as dissolved
sulfate
The sulfate or sulphate ion is a polyatomic anion with the empirical formula . Salts, acid derivatives, and peroxides of sulfate are widely used in industry. Sulfates occur widely in everyday life. Sulfates are salts of sulfuric acid and many ...
.
Hydrogen sulfide
Hydrogen sulfide is a chemical compound with the formula . It is a colorless chalcogen-hydride gas, and is toxic, corrosive, and flammable. Trace amounts in ambient atmosphere have a characteristic foul odor of rotten eggs. Swedish chemist ...
is also present in some parts of the deep ocean where it is released from hydrothermal vents. Both sulfate and sulfide can be used by specialized microbes to obtain energy or to grow. Gases including
sulfur dioxide
Sulfur dioxide (IUPAC-recommended spelling) or sulphur dioxide (traditional Commonwealth English) is the chemical compound with the formula . It is a colorless gas with a pungent smell that is responsible for the odor of burnt matches. It is r ...
and
carbonyl sulfide
Carbonyl sulfide is the chemical compound with the linear formula . It is a colorless flammable gas with an unpleasant odor. It is a linear molecule consisting of a carbonyl double bonded to a sulfur atom. Carbonyl sulfide can be considered to ...
make up the atmospheric component of the sulfur cycle. Any process that transports or chemically transforms sulfur between these many natural materials also has the potential to fractionate sulfur isotopes.
Sulfur isotopic abundance in natural materials

Sulfur in natural materials can vary widely in isotopic composition: compilations of the δ
34S values of natural sulfur-containing materials include values ranging from −55‰ to 135‰ VCDT.
The ranges of δ
34S values vary across sulfur-containing materials: for example, the sulfur in animal tissue ranges from ~ −10 to +20‰ VCDT, while the sulfate in natural waters ranges from ~ −20 to +135‰ VCDT.
The range of sulfur isotope abundances in different natural materials results from the isotope fractionation associated with natural processes like the formation and modification of those materials, discussed in the next section.
Processes that fractionate sulfur isotopes
Numerous natural processes are capable of fractionating sulfur isotopes. Microbes are capable of a wide variety of sulfur metabolisms, including the oxidation, reduction, and
disproportionation
In chemistry, disproportionation, sometimes called dismutation, is a redox reaction in which one compound of intermediate oxidation state converts to two compounds, one of higher and one of lower oxidation state. The reverse of disproportionatio ...
(or simultaneous oxidation and reduction) of sulfur compounds.
The effect of these metabolisms on sulfur isotopic composition of the reactants and products is also highly variable, depending on the rate of relevant reactions, availability of nutrients,
diagenesis
Diagenesis () is the process of physical and chemical changes in sediments first caused by water-rock interactions, microbial activity, and compaction after their deposition. Increased pressure and temperature only start to play a role as sedi ...
, and other biological, physical and environmental parameters.
As an example, the microbial reduction of sulfate to sulfide generally results in a
34S-depleted product, but the strength of this fractionation has been shown to range from 0 to 65.6‰ VCDT.
Many abiotic processes also fractionate sulfur isotopes. Small fractionations with ε values from 0–5‰ have been observed in the formation of the mineral gypsum, an
evaporite
An evaporite () is a water- soluble sedimentary mineral deposit that results from concentration and crystallization by evaporation from an aqueous solution. There are two types of evaporite deposits: marine, which can also be described as oce ...
mineral produced through the evaporation of seawater.
Some
sulfide mineral
The sulfide minerals are a class of minerals containing sulfide (S2−) or disulfide () as the major anion. Some sulfide minerals are economically important as metal ores. The sulfide class also includes the selenide mineral, selenides, the tell ...
s, including pyrite and galena, can form through
thermochemical sulfate reduction
The sulfur cycle is a biogeochemical cycle in which the sulfur moves between rocks, waterways and living systems. It is important in geology as it affects many minerals and in life because sulfur is an essential element (CHNOPS), being a consti ...
, a process in which seawater sulfate trapped in seafloor rock is reduced to sulfide by geological heat as the rock is buried; this process generally fractionates sulfur more strongly than gypsum formation.
Prior to the rise of oxygen in Earth's atmosphere (referred to as the
Great Oxidation Event
The Great Oxidation Event (GOE) or Great Oxygenation Event, also called the Oxygen Catastrophe, Oxygen Revolution, Oxygen Crisis or Oxygen Holocaust, was a time interval during the Earth's Paleoproterozoic era when the Earth's atmosphere an ...
), additional sulfur-fractionating processes referred to as mass-anomalous or
mass-independent fractionation Mass-independent isotope fractionation or Non-mass-dependent fractionation (NMD), refers to any chemical or physical process that acts to separate isotopes, where the amount of separation does not scale in proportion with the difference in the mass ...
uniquely affected the abundance of
33S and
36S in the rock record.
Mass-anomalous fractionations are rare, but they can occur through certain photochemical reactions of gases in the atmosphere.
Studies have shown that photochemical reactions of atmospheric sulfur dioxide can cause substantial mass-anomalous fractionation of sulfur isotopes.
Biological processes of sulfur uptake
All organisms metabolize sulfur, and it is incorporated into the structure of
protein
Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residue (biochemistry), residues. Proteins perform a vast array of functions within organisms, including Enzyme catalysis, catalysing metab ...
s,
polysaccharide
Polysaccharides (), or polycarbohydrates, are the most abundant carbohydrates found in food. They are long-chain polymeric carbohydrates composed of monosaccharide units bound together by glycosidic linkages. This carbohydrate can react with wat ...
s,
steroid
A steroid is an organic compound with four fused compound, fused rings (designated A, B, C, and D) arranged in a specific molecular configuration.
Steroids have two principal biological functions: as important components of cell membranes t ...
s, and many
coenzyme
A cofactor is a non-protein chemical compound or Metal ions in aqueous solution, metallic ion that is required for an enzyme's role as a catalysis, catalyst (a catalyst is a substance that increases the rate of a chemical reaction). Cofactors can ...
s. The biological pathway by which an organism takes up and/or removes sulfur can have significant impacts on the sulfur isotope composition of the organism and its environment.
Microorganisms that consume and reduce sulfate in relatively large quantities perform a different pathway of sulfur uptake called
dissimilatory sulfate reduction
Dissimilatory sulfate reduction is a form of anaerobic respiration that uses sulfate as the terminal electron acceptor to produce hydrogen sulfide. This metabolism is found in some types of bacteria and archaea which are often termed sulfate-redu ...
. These organisms use sulfate reduction as an energy source as opposed to a way to synthesize new cell components, and remove the resulting sulfide as a waste product. Microbial sulfate reduction has been demonstrated to fractionate sulfur isotopes in bacteria, with some studies showing a dependence upon sulfate concentration
and/or temperature.
Studies examining dozens of species of dissimilatory sulfate reducing microbes have observed sulfur isotope fractionations ranging from −65.6‰ to 0‰.

Some organisms take in relatively small amounts of sulfate in a process called
assimilatory sulfate reduction, for the purpose of synthesizing compounds that contain sulfur, such as the
amino acid
Amino acids are organic compounds that contain both amino and carboxylic acid functional groups. Although over 500 amino acids exist in nature, by far the most important are the 22 α-amino acids incorporated into proteins. Only these 22 a ...
s
methionine
Methionine (symbol Met or M) () is an essential amino acid in humans.
As the precursor of other non-essential amino acids such as cysteine and taurine, versatile compounds such as SAM-e, and the important antioxidant glutathione, methionine play ...
and
cysteine
Cysteine (; symbol Cys or C) is a semiessential proteinogenic amino acid with the chemical formula, formula . The thiol side chain in cysteine enables the formation of Disulfide, disulfide bonds, and often participates in enzymatic reactions as ...
that can then be used to make
protein
Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residue (biochemistry), residues. Proteins perform a vast array of functions within organisms, including Enzyme catalysis, catalysing metab ...
s.
In phytoplankton, most of the sulfur taken up through assimilatory sulfate reduction is incorporated into biomass as proteins (~35%), sulfate esters (~20%), and low-weight sulfur-containing compounds (~40%). Literature on the
isotopic fractionation
Isotope fractionation describes fractionation processes that affect the relative abundance of isotopes, a phenomena that occurs (and so advantage is taken of it) in the study geochemistry, biochemistry, food science, and other fields. Normally, ...
effects of the assimilatory sulfate reduction pathway is much more limited than that discussing dissimilatory sulfate reduction, but some sources report slight isotopic variations (
δ34S = −4.4‰ to +0.5‰) in the resulting organic sulfur relative to the surrounding sulfate.
While dissimilatory sulfate reduction and assimilatory sulfate reduction are two of the most common pathways by which organisms take up and utilize sulfate, there are
many other pathways by which living things take up sulfur. For example, sulfur oxidation of compounds like
hydrogen sulfide
Hydrogen sulfide is a chemical compound with the formula . It is a colorless chalcogen-hydride gas, and is toxic, corrosive, and flammable. Trace amounts in ambient atmosphere have a characteristic foul odor of rotten eggs. Swedish chemist ...
and elemental sulfur is performed by
lithotroph
Lithotrophs are a diverse group of organisms using an inorganic substrate (usually of mineral origin) to obtain reducing equivalents for use in biosynthesis (e.g., carbon fixation, carbon dioxide fixation) or energy conservation (i.e., Adenosine tr ...
ic bacteria and
chemosynthetic
In biochemistry, chemosynthesis is the biological conversion of one or more carbon-containing molecules (usually carbon dioxide or methane) and nutrients into organic matter using the oxidation of inorganic compounds (e.g., hydrogen gas, hydrog ...
archaea
Archaea ( ) is a Domain (biology), domain of organisms. Traditionally, Archaea only included its Prokaryote, prokaryotic members, but this has since been found to be paraphyletic, as eukaryotes are known to have evolved from archaea. Even thou ...
. Most animals obtain sulfur directly from the methionine and cysteine in the protein they consume.
Sulfur isotopes in plants
Methods of detection
Previous efforts to understand how sulfur metabolism and biosynthetic pathways relied on expensive labeling experiments using radioactive
35S. By leveraging natural assimilatory processes, stable isotope ratios can be used to track the sources of sulfur for plants, plant organs used in sulfur acquisition, the movement of sulfur through plants.
Sulfur (S) stable isotope composition measurements are often performed using an Elemental Analysis-Isotope Ratio Mass Spectrometer, (
EA-IRMS) in which organic sulfur from biological samples is oxidized to sulfur dioxide (SO
2) and analyzed on a mass spectrometer. The mass spectrometer is used to quantify the ratio of the lighter (
32S
16O
2) to the heavier (
34S
16O
2) isotopologue of SO
2, and this ratio is then compared to sulfur isotope standards in order to standardize data to the VSMOW scale. In biological materials, sulfur is scarce relative to other organic elements like carbon and oxygen, introducing some additional difficulty in measuring its stable isotope composition. The elemental S composition of plant matter is ≈0.2%, accounting for approximately 2 mmol/m
2 in most leaf tissue.
In order to reach detectable levels of 30 ng to 3 μg of elemental S to calculate reliable δ
34S values, leaf tissue samples need to be between 2–5 mg.
Improvements in detection have been made in recent years in the utilization of gas chromatography coupled with multicollector
ICP-MS
Inductively coupled plasma mass spectrometry (ICP-MS) is a type of mass spectrometry that uses an inductively coupled plasma to ionize the sample. It atomizes the sample and creates atomic and small polyatomic ions, which are then detected. It ...
(GC/MC-ICP-MS) to be able to measure pmol quantities of organic S. Additionally,
ICP-MS
Inductively coupled plasma mass spectrometry (ICP-MS) is a type of mass spectrometry that uses an inductively coupled plasma to ionize the sample. It atomizes the sample and creates atomic and small polyatomic ions, which are then detected. It ...
has been used to measure nanomolar quantities of dissolved sulfate. Most studies have focused on measuring the bulk δ
34S value of plant tissues and few studies have been performed on measuring the
δ34S values of individual S-containing compounds. The coupling of high-performance liquid chromatography (
HPLC
High-performance liquid chromatography (HPLC), formerly referred to as high-pressure liquid chromatography, is a technique in analytical chemistry used to separate, identify, and quantify specific components in mixtures. The mixtures can origina ...
) with ICP-MS has been proposed as a way to test individual S-containing compounds.
Sources of sulfur in plants
Each year, approximately 0.3 gigatons of elemental sulfur is converted into organic matter by photosynthetic organisms. This organic sulfur is allocated into a diversity of compounds such as amino acids – namely
cysteine
Cysteine (; symbol Cys or C) is a semiessential proteinogenic amino acid with the chemical formula, formula . The thiol side chain in cysteine enables the formation of Disulfide, disulfide bonds, and often participates in enzymatic reactions as ...
(Cys) and
methionine
Methionine (symbol Met or M) () is an essential amino acid in humans.
As the precursor of other non-essential amino acids such as cysteine and taurine, versatile compounds such as SAM-e, and the important antioxidant glutathione, methionine play ...
(Met) – proteins, cofactors, antioxidants, sulfate groups, Fe-S centers and secondary metabolites. The three main sources of sulfur are atmospheric, soil, and aquatic.
Most vegetation can acquire sulfur from gaseous atmospheric compounds or various ions either in soil solutions or water bodies.
Uptake of gaseous and dissolved sulfur compounds apparently occurs with little accompanying isotopic selectivity.
Dissolved sulfate (SO
42-) is considered to be the central pool which is metabolized by microorganisms and plants as most forms of atmospheric sulfur is oxidized into sulfate. Atmospheric sulfur is eventually returned to the soil when it is scrubbed from the atmosphere during precipitation or through dryfall.
Atmosphere
Many plants acquire sulfur through gaseous atmospheric compounds. Leaves of trees have δ
34S values lying between those of air and soil, suggesting that there is uptake occurring from atmospheric and soil sources. The δ
34S values of trees has also been demonstrated to be height dependent, with the foliage at the tops of
conifer
Conifers () are a group of conifer cone, cone-bearing Spermatophyte, seed plants, a subset of gymnosperms. Scientifically, they make up the phylum, division Pinophyta (), also known as Coniferophyta () or Coniferae. The division contains a sin ...
s,
bull rushes and
deciduous
In the fields of horticulture and botany, the term deciduous () means "falling off at maturity" and "tending to fall off", in reference to trees and shrubs that seasonally shed Leaf, leaves, usually in the autumn; to the shedding of petals, aft ...
trees having δ
34S values more reflective of the atmosphere and lower foliage having δ
34S values closer to that of soil.
It has been proposed that this is due to upper foliage exerting a canopy action on the lower branches, taking up atmospheric sulfur before it can reach lower levels. This is further supported with the epiphytic lichens and mosses having δ
34S values close to atmospheric S compounds. This occurs due to lichens and mosses having no access to soil and relying on the direct uptake of gaseous sulfur, dissolved sulfur through rainfall and dry fall accumulation, providing a cumulative record of atmospheric sulfur isotope composition.
Main forms of atmospheric sulfur come from the natural sulfur emissions formed biologically and emitted as H
2S or organic sulfur gases such as DMS (dimethyl sulfide), COS (carbonyl sulfide), and CS
2 (carbon disulfide). These gases are predominantly formed over oceans, wetlands, salt marshes, and estuaries by algae and bacteria.
Anthropogenic emissions have increased the concentration of sulfur in the atmosphere mainly through emissions of SO
2, from coal, oil, industrial processes, and biomass burning. In 2000, global anthropogenic emission of sulfur was estimated of 55.2–68 Tg S per year, which is much higher than the natural sulfur emissions estimated to be 34 Tg S per year.
In the event of excess sulfur in plant tissue, it has been demonstrated that when exposed to high doses of sulfur dioxide, plants emit hydrogen sulfide (H
2S) and possibly other reduced sulfur compounds in response to high sulfur loading
Soil
If soil sulfur is derived consistently from one source, the water-soluble and insoluble organic S fractions acquire similar isotopic compositions. In the case that there are two or more sources and/or if the isotopic composition of atmospheric or groundwater sulfate fluctuates, there may not be sufficient time for isotopic homogenization among the various forms of sulfur. The primary form of sulfur in soil is sulfate, which is transported upwards through the root system with minimal δ
34S fractionation by 1–2‰.
In contrast to higher canopy plants reflecting atmospheric δ
34S, protected understory plants tend to reflect soil sulfur.
Aquatic
The forms of sulfur available in aquatic environments depends on whether it is a marine or freshwater environment. Freshwater environments are more varied and subject to a multitude of sulfur inputs and outputs, including atmospheric deposition, runoff, diagenesis of bedrock and the presence of microbial sulfate reducers (MSR). Overall, the main species of sulfur in freshwater environments are hydrogen sulfide and sulfate. In estuaries, plant roots extend into sulfide-rich,
34S-depleted sediments created by MSR, and incorporate that sulfide into their biomass. However, levels of sulfide produced by MSR can be toxic, and it has been proposed that these plants pump oxygen into their roots to oxidize sulfide into the less toxic sulfate.
In these environments algae will preferentially acquire sulfur from HS
− if present, rather than the more abundant sulfate, as sulfide can be readily incorporated into the direct formation of cysteine. This is consistent with cyanobacteria being able to carry out anoxygenic photosynthesis using sulfide.
In marine environments, the main forms of sulfur available is in sulfate at ~29 mM and a δ
34S of 21‰ in seawater. At the surface of the sea, this excess in sulfur is subsequently converted into
dimethylsulfoniopropionate
Dimethylsulfoniopropionate (DMSP), is an organosulfur compound with the formula (CH3)2S+CH2CH2COO−. This zwitterionic metabolite can be found in marine phytoplankton, seaweeds, and some species of terrestrial and aquatic vascular plants. ...
(DMSP) by algae as an osmolyte and a repellent against grazing. DMSP also accounts for 50–100% of bacterial sulfur demand, making it the most important source of reduced sulfur for marine bacteria. DMSP's cleavage product
dimethyl sulfide
Dimethyl sulfide (DMS) or methylthiomethane is an organosulfur compound with the formula . It is the simplest thioether and has a characteristic disagreeable odor. It is a flammable liquid that boils at . It is a component of the smell produc ...
(DMS) is highly volatile, escaping the ocean into the atmosphere with emissions ranging between 15 and 33 Tg S year
−1 and accounting for 50–60% of the total natural reduced sulfur flux to the atmosphere. In seafloor sediments, microbial sulfate reduction is a major biogeochemical process that consumes organic carbon. Microbial sulfate reduction can completely use up sulfate from the seawater and accumulate hydrogen sulfide in the sediment. Sulfide reoxidation and disproportionation are also thought to be major processes affecting the sulfur isotopic compositions of marine minerals and sediment porewater.
Biochemistry
~90% of the organic sulfur in plants is concentrated in the amino acids cysteine and methionine.
Cysteine acts as the direct or indirect precursor to any other organic sulfur compounds in plants such as coenzyme-A, methionine, biotin, lipoic acid and glutathione.
The carbon skeleton necessary for sulfur assimilation are provided by
glycolysis
Glycolysis is the metabolic pathway that converts glucose () into pyruvic acid, pyruvate and, in most organisms, occurs in the liquid part of cells (the cytosol). The Thermodynamic free energy, free energy released in this process is used to form ...
(acetyl-CoA),
respiration
Respiration may refer to:
Biology
* Cellular respiration, the process in which nutrients are converted into useful energy in a cell
** Anaerobic respiration, cellular respiration without oxygen
** Maintenance respiration, the amount of cellul ...
(aspartic acid, Asp, which derives from oxaloacetate) and photorespiration (serine, Ser).
Because cysteine is a direct precursor to methionine, methionine is naturally
34S-depleted in comparison to cysteine.
The majority of sulfur is generally in the organic form but, when excess sulfur is available in the environment, inorganic sulfate becomes the major sulfur form. In most plants,
34S discrimination is minimal, and in a study of rice plants it was observed that discrimination takes place in the uptake stage, depleting imported sulfate by 1–2‰ from the source.
This effect is through the expression of SO
42− transporter genes (SULTR), 14 of which have been identified – which are expressed dependent on the availability of sulfate in the environment. When sulfate is plentiful low affinity transporters are expressed and when sulfate is scarce high affinity genes with greater
34S discrimination are expressed.
Distribution through plant organs
Sulfate transported through the roots and SO
2 diffusing into leaves becomes the pool for plants to assimilate sulfur throughout their tissues. Though there is minimal fractionation from the source sulfur of the total plant organic matter, in wheat, roots and stems are depleted from soil by 2‰ and leaves and grain are 2‰ enriched. The
34S enrichment in leaf whole matter is not caused by
34S-enriched sulfate present in the leaf, but is the result of the
34S-enrichment arriving at sink organs causing proteins in the leaves to be
34S-enriched.
In rice, translocation from root to shoot does not discriminate S isotopes, however, the sulfate pools of the shoot are significantly
34S-enriched with respect to the sulfate pools of both root and sap. As sulfate moves through the plant system and is incorporated into biomass, the pool becomes enriched, giving organs such as leaves and grains higher δ
34S values than earlier tissues.
Applications
Rise of atmospheric oxygen
Signatures of mass-anomalous sulfur isotope fractionation preserved in the rock record have been an important piece of evidence for understanding the
Great Oxidation Event
The Great Oxidation Event (GOE) or Great Oxygenation Event, also called the Oxygen Catastrophe, Oxygen Revolution, Oxygen Crisis or Oxygen Holocaust, was a time interval during the Earth's Paleoproterozoic era when the Earth's atmosphere an ...
, the sudden rise of oxygen on the ancient Earth.
Nonzero values of Δ
33S and Δ
36S are present in the sulfur-bearing minerals of
Precambrian
The Precambrian ( ; or pre-Cambrian, sometimes abbreviated pC, or Cryptozoic) is the earliest part of Earth's history, set before the current Phanerozoic Eon. The Precambrian is so named because it preceded the Cambrian, the first period of t ...
rock formed greater than 2.45 billion years ago, but completely absent from rock less than 2.09 billion years old.
Multiple mechanisms have been proposed for how oxygen prevents the fingerprints of mass-anomalous fractionation from being created and preserved; nevertheless, all studies of Δ
33S and Δ
36S records conclude that oxygen was essentially absent from Earth's atmosphere prior to 2.45 billion years ago.
Paleobiology and paleoclimate
A number of microbial metabolisms fractionate sulfur isotopes in distinctive ways, and the sulfur isotopic fingerprints of these metabolisms can be preserved in minerals and ancient organic matter.
By measuring the sulfur isotopic composition of these preserved materials, scientists can reconstruct ancient biological processes and the environments where they occurred.
δ
34S values in the geologic record have been inferred to reveal the history of microbial sulfate reduction and sulfide oxidation.
Paired δ
34S and Δ
33S records have also been used to show ancient microbial sulfur disproportionation.
Microbial dissimilatory sulfate reduction (MSR), an energy-yielding metabolism performed by bacteria in anoxic environments, is associated with an especially large fractionation factor.
The observed
34ε
MSR values range from 0 to −65.6‰.
Many factors influence the size of this fractionation, including sulfate reduction rate,
sulfate concentration and transport,
availability of electron donors and other nutrients,
and physiological differences like protein expression.
Sulfide produced through MSR may then go on to form the mineral pyrite, preserving the
34S-depleted fingerprint of MSR in sedimentary rocks.
Many studies have investigated the δ
34S values of ancient pyrite in order to understand past biological and environmental conditions.
For example, pyrite δ
34S records have been used to reconstruct shifts in
primary productivity
Primary or primaries may refer to:
Arts, entertainment, and media Music Groups and labels
* Primary (band), from Australia
* Primary (musician), hip hop musician and record producer from South Korea
* Primary Music, Israeli record label
Works
* ...
levels,
changing ocean oxygen content,
and glacial-interglacial changes in sea level and weathering. Some studies compare sulfur isotopes in pyrite to a second sulfur-containing material, like dissolved sulfate or preserved organic matter.
Comparing pyrite to another material gives a fuller picture of how sulfur moved through ancient environments: it provides clues about the size of ancient
34ε
MSR values and the environmental conditions controlling MSR fractionation of sulfur isotopes.
Paleoceanography
δ
34S records have been used to infer changes in seawater sulfate concentrations. Because the δ
34S values of
carbonate-associated sulfate are thought to be sensitive to seawater sulfate levels, these measurements have been used to reconstruct the history of seawater sulfate.
δ
34S values of pyrite have also been applied to reconstruct the concentration of seawater sulfate, based on expected biological fractionations at low sulfate concentrations.
Both of these methods rely on assumptions about the depositional environment or the biological community, creating some uncertainty in the resulting reconstructions.
See also
*
Δ34S
The δ34S (pronounced ''delta 34 S'') value is a standardized method for reporting measurements of the ratio of two stable isotopes of sulfur, 34S:32S, in a sample against the equivalent ratio in a known reference standard. The most commonly used ...
*
Isotopes of sulfur
Sulfur (16S) has 23 known isotopes with mass numbers ranging from 27 to 49, four of which are stable: 32S (95.02%), 33S (0.75%), 34S (4.21%), and 36S (0.02%). The preponderance of sulfur-32 is explained by its production from carbon-12 plus succe ...
*
Hydrogen isotope biogeochemistry
Hydrogen isotope biogeochemistry (HIBGC) is the scientific study of biological, geological, and chemical processes in the environment using the distribution and relative abundance of hydrogen isotopes. Hydrogen has two stable isotopes, protium H an ...
*
Stable isotope ratio
The term stable isotope has a meaning similar to stable nuclide, but is preferably used when speaking of nuclides of a specific element. Hence, the plural form stable isotopes usually refers to isotopes of the same element. The relative abundan ...
*
Isotope analysis
Isotope analysis is the identification of isotopic signature, abundance of certain stable isotopes of chemical elements within organic and inorganic compounds. Isotopic analysis can be used to understand the flow of energy through a food we ...
*
Isotope geochemistry
Isotope geochemistry is an aspect of geology based upon the study of natural variations in the relative abundances of isotopes of various Chemical element, elements. Variations in isotopic abundance are measured by isotope-ratio mass spectrometry, ...
References
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Sulfur
Isotopes of sulfur
Biogeochemistry