The Sinaloan pocket mouse (''Chaetodipus pernix'') is one of 17
species
A species () is often defined as the largest group of organisms in which any two individuals of the appropriate sexes or mating types can produce fertile offspring, typically by sexual reproduction. It is the basic unit of Taxonomy (biology), ...
of
pocket mice in the
genus
Genus (; : genera ) is a taxonomic rank above species and below family (taxonomy), family as used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In bino ...
''Chaetodipus.''
Two
subspecies
In Taxonomy (biology), biological classification, subspecies (: subspecies) is a rank below species, used for populations that live in different areas and vary in size, shape, or other physical characteristics (Morphology (biology), morpholog ...
of ''C. pernix'' are recognized, ''C. p. pernix'' and ''C. p. rostratus,'' all are
endemic
Endemism is the state of a species being found only in a single defined geographic location, such as an island, state, nation, country or other defined zone; organisms that are indigenous to a place are not endemic to it if they are also foun ...
to
Mexico
Mexico, officially the United Mexican States, is a country in North America. It is the northernmost country in Latin America, and borders the United States to the north, and Guatemala and Belize to the southeast; while having maritime boundar ...
.
This small mouse lives among shrubs and has a wide range of coat colors.
Range and habitat
''C. pernix'' mostly lives in the coastal plain of
Sinaloa
Sinaloa (), officially the (), is one of the 31 states which, along with Mexico City, compose the Federal Entities of Mexico. It is divided into 18 municipalities, and its capital city is Culiacán Rosales.
It is located in northwest Mexic ...
state within Mexico, which extends from southern
Sonora
Sonora (), officially Estado Libre y Soberano de Sonora (), is one of the 31 states which, along with Mexico City, comprise the Administrative divisions of Mexico, Federal Entities of Mexico. The state is divided into Municipalities of Sonora, 72 ...
to northern
Nayarit
Nayarit, officially the Free and Sovereign State of Nayarit, is one of the 31 states that, along with Mexico City, comprise the Political divisions of Mexico, Federal Entities of Mexico. It is divided in Municipalities of Nayarit, 20 municipalit ...
. Their habitat consists mostly of small trees, shrubs, and cacti. Sinaloan pocket mice are found on sandy soil, living under low bushes or dense networks of vines and grasses.
Their habitat does not contain any rock material, unlike in its sister species, the
rock pocket mouse.
Description
The Sinaloan pocket mouse is one of the smallest in the genus ''Chaetodipus'' with a total length of less than 200mm. Their skull is narrow with an elongated nose and medium-sized ears. ''C. pernix'' has a thinly haired tail that is longer than the body length. Their coat color is variable (usually yellowish-brown), but always darker on the back and lighter on the sides and belly. Their diet consists of grains and seeds. The average litter size is seven.
Color polymorphism
Coat color is a
genetic polymorphism
A gene is said to be polymorphic if more than one allele occupies that gene's locus within a population. In addition to having more than one allele at a specific locus, each allele must also occur in the population at a rate of at least 1% to ge ...
. Many different coat colors are seen between species of pocket mice and even within the same population because of differences in their
genotype
The genotype of an organism is its complete set of genetic material. Genotype can also be used to refer to the alleles or variants an individual carries in a particular gene or genetic location. The number of alleles an individual can have in a ...
.
Multiple aspects of the environment put selective pressures on pocket mice to adapt their coat colors.
Variation in coat color between pocket mice can be a selective advantage for two main reasons: concealment and regulation of
physiological processes.
Concealment offers a large selective advantage for pocket mice that are able to successfully hide from potential predators, also known as
Crypsis
In ecology, crypsis is the ability of an animal or a plant to avoid observation or detection by other animals. It may be part of a predation strategy or an antipredator adaptation. Methods include camouflage, nocturnality, subterranean life ...
. Pocket mice generally show two forms of crypsis:
camouflage
Camouflage is the use of any combination of materials, coloration, or illumination for concealment, either by making animals or objects hard to see, or by disguising them as something else. Examples include the leopard's spotted coat, the b ...
and
countershading
Countershading, or Thayer's law, is a method of camouflage in which animal coloration, an animal's coloration is darker on the top or upper side and lighter on the underside of the body. This pattern is found in many species of mammals, reptile ...
. Camouflage is seen when an organism's coloring helps it blend into its background or environment. Evidence of camouflage is seen between different populations of pocket mice that live in two different environments. The Sinaloan pocket mouse usually has a yellow-brown coat with black hairs because they live in a sandy environment under shrubs, while the
Rock pocket mouse usually has a grey or black coat color and lives among rocks.
Mice who show a very different coat color than their environment are more susceptible to predation because they can be seen easier than mice that blend in with their environment.
Countershading is another type of camouflage and is seen when an organism's pigmentation is darker on the upper side of the body and lighter on the underside of the body. Sinaloan pocket mice almost always have a lighter belly and sides compared to the darker color of their back. The selective advantage of this color patterning is again, concealment from predators, mostly owls in this case. Countershading helps the pocket mouse to reduce the appearance of their shadow in sunny environments.
Living in the sunny desert, this color pattern has a large selective advantage. Mice whose shadows were easily seen by owls flying overhead would more likely become prey, than mice whose shadows weren't as obvious.
Coat color in pocket mice can also be a selective advantage because it can help regulate physiological processes of the body. Light coat colors have a selective advantage in hot, sunny environments because they can help regulate body temperature. A dark coat in a sunny environment would attract sunlight and cause the mouse to overheat more easily, requiring more energy from the mouse to try and lower their body temperature. A light coat color requires less energy input to regulate body temperature and therefore has a selective advantage over dark coat color which requires more energy.
The selective advantage of coat color for concealment and regulation of body temperature likely caused geographic variation of coat color as well. For both concealment and body temperature regulation, the mice better adapted to their environment will likely survive better and produce more offspring. This means that the mouse that blends in with its environment the best, in a way that uses the least amount of energy will have a selective advantage. Going along with this, mice in different environments require different coat colors to blend in most effectively. Geographic variation between environments is another selective pressure that helped color polymorphism evolve between pocket mice. Pocket mice that live in sunny environments with an abundance of sand will have a selective advantage with light colored yellow or brown coats. In contrast, pocket mice that live on rocks in environments with less sun are more likely to have a selective advantage with darker colored grey or black coats.
Genetic basis

The genetic difference for varying coat colors is controlled largely by two
protein
Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residue (biochemistry), residues. Proteins perform a vast array of functions within organisms, including Enzyme catalysis, catalysing metab ...
s in pocket mice:
eumelanin
Melanin (; ) is a family of biomolecules organized as oligomers or polymers, which among other functions provide the pigments of many organisms. Melanin pigments are produced in a specialized group of cells known as melanocytes.
There are ...
and
pheomelanin
Melanin (; ) is a family of biomolecules organized as oligomers or polymers, which among other functions provide the Biological pigment, pigments of many organisms. Melanin pigments are produced in a specialized group of cells known as melan ...
. Production of eumelanin gives hair a black or brown color, while pheomelanin gives hair a red color.
Melanocyte
Melanocytes are melanin-producing neural-crest, neural crest-derived cell (biology), cells located in the bottom layer (the stratum basale) of the skin's epidermis (skin), epidermis, the middle layer of the eye (the uvea),
the inner ear,
vagina ...
s are pigment producing cells, which are controlled by
gene
In biology, the word gene has two meanings. The Mendelian gene is a basic unit of heredity. The molecular gene is a sequence of nucleotides in DNA that is transcribed to produce a functional RNA. There are two types of molecular genes: protei ...
s. Differences in
gene expression
Gene expression is the process (including its Regulation of gene expression, regulation) by which information from a gene is used in the synthesis of a functional gene product that enables it to produce end products, proteins or non-coding RNA, ...
cause melanocytes to produce varying levels and types of pigment.
Eumelanin is produced when the
G protein-coupled receptor
G protein-coupled receptors (GPCRs), also known as seven-(pass)-transmembrane domain receptors, 7TM receptors, heptahelical receptors, serpentine receptors, and G protein-linked receptors (GPLR), form a large group of evolutionarily related ...
called
melanocortin-1-receptor (MC1R) is activated. Pheomelanin production is controlled by the
agouti-signaling protein, which is an
inverse agonist
In pharmacology, an inverse agonist is a drug that binds to the same receptor as an agonist but induces a pharmacological response opposite to that of the agonist.
A neutral antagonist has no activity in the absence of an agonist or inverse agon ...
of MC1R. Therefore, Agouti expression causes decreased levels of eumelanin production, which allows increased levels of pheomelanin expression.
Variation in the environment can cause proteins to be expressed differently in the
genome
A genome is all the genetic information of an organism. It consists of nucleotide sequences of DNA (or RNA in RNA viruses). The nuclear genome includes protein-coding genes and non-coding genes, other functional regions of the genome such as ...
, producing variation in coat color between two different environments.
References
*Patton, J. L. 2005. Family Heteromyidae. pp. 844–858 ''in'' Mammal Species of the World a Taxonomic and Geographic Reference. D. E. Wilson and D. M. Reeder eds. Johns Hopkins University Press, Baltimore.
{{Taxonbar, from=Q172553
Chaetodipus
Endemic mammals of Mexico
Sinaloan dry forests
Mammals described in 1898
Taxa named by Joel Asaph Allen
Taxonomy articles created by Polbot
Sonoran–Sinaloan transition subtropical dry forest