Silyl Halide
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Silylation is the introduction of one or more (usually) substituted silyl groups (R3Si) to a molecule. Silylations are core methods for production of
organosilicon chemistry Organosilicon chemistry is the study of organometallic compounds containing carbon–silicon bonds, to which they are called organosilicon compounds. Most organosilicon compounds are similar to the ordinary organic compounds, being colourless, fl ...
.
Silanization Silanization is the attachment of an organosilyl group to some chemical species. Almost always, silanization is the conversion of a silanol-terminated surface to a alkylsiloxy-terminated surface. This conversion confers hydrophobicity to a previ ...
, while similar to silylation, usually refers to attachment of silyl groups to solids. Silyl groups are commonly used for: alcohol protection,
enolate In organic chemistry, enolates are organic anions derived from the deprotonation of carbonyl () compounds. Rarely isolated, they are widely used as reagents in the Organic synthesis, synthesis of organic compounds. Bonding and structure Enolate ...
trapping,
gas chromatography Gas chromatography (GC) is a common type of chromatography used in analytical chemistry for Separation process, separating and analyzing compounds that can be vaporized without Chemical decomposition, decomposition. Typical uses of GC include t ...
, electron-impact
mass spectrometry Mass spectrometry (MS) is an analytical technique that is used to measure the mass-to-charge ratio of ions. The results are presented as a ''mass spectrum'', a plot of intensity as a function of the mass-to-charge ratio. Mass spectrometry is used ...
(EI-MS), and coordinating with metal complexes.


Protection Chemistry


Protection

Silylation is often used to protect alcohols, as well as amines, carboxylic acids, and terminal alkynes. The products after silylation, namely silyl ethers and silyl amines, are resilient toward basic conditions. Protection is typically done by reacting the functional group with a silyl halide by an
SN2 reaction The bimolecular nucleophilic substitution (SN2) is a type of reaction mechanism that is common in organic chemistry. In the SN2 reaction, a strong nucleophile forms a new bond to an sp3-hybridised carbon atom via a backside attack, all while t ...
mechanism, typically in the presence of base. The protection mechanism begins with the base deprotonating the alcohol group. Next, the deprotonated alcohol group attacks the silyl atom of the silyl halide compound. The halide acts as a leaving group and ends up in solution. A workup step follows to remove any excess base within the solution. The overall reaction scheme is as follows: # # Other silylating agents include
bis(trimethylsilyl)acetamide Bis(trimethylsilyl)acetamide (BSA) is an organosilicon compound with the formula (Me = CH3). It is a colorless liquid that is soluble in diverse organic solvents, but reacts rapidly with moisture and solvents containing OH and NH groups. It i ...
(BSA). The reaction of BSA with alcohols gives the corresponding trimethyl
silyl ether Silyl ethers are a group of chemical compounds which contain a silicon atom covalently bonded to an alkoxy group. The general structure is R1R2R3Si−O−R4 where R4 is an alkyl group or an aryl group. Silyl ethers are usually used as protectin ...
, together with acetamide as a byproduct (Me = CH3): :


Deprotection

Due to the strength of the Si-F bond, fluoride salts are commonly used as a deprotecting agent of silyl groups. The primary fluorous deprotecting agent is
tetra-n-butylammonium fluoride Tetra-''n''-butylammonium fluoride, commonly abbreviated to TBAF and ''n''-Bu4NF, is a quaternary ammonium salt with the chemical formula (CH3CH2CH2CH2)4N+F−. It is commercially available as the white solid trihydrate and as a solution in tetra ...
(TBAF), as its aliphatic chains in help incorporate the fluoride ion into organic solvents. Deprotection with a fluoride ion occurs by an SN2 mechanism, followed by acidic workup to protonate the resulting alkoxide: Deprotection of the alcohol can also be done using either Brønsted acids or Lewis acid conditions. Brønsted acids, like PyBr3 (pyridinium tribromide), deprotect the alcohol by acting as a proton donor.


Modifying Silyl Reactivity

Sterically bulkier alkyl substituents tend to decrease the reactivity of the silyl group. Consequently, bulky substituents increase the silyl group's protective abilities. To add bulkier alkyl silyls, more strenuous conditions are required for alcohol protection. As bulkier groups require more strenuous conditions to add, they also require more strenuous conditions to remove. Additionally, bulkier silyl groups are more selective for the type of alcohols they react with, resulting in a preference for primary alcohols over secondary alcohols. Thus, silyl groups such as TBDMS and TIPS can be used to selectively protect primary alcohols over secondary alcohols.   In acidic conditions, alkyl substituents acting as electron withdrawing groups decrease the reaction rate. As bulker silyl groups are more likely to be electron withdrawing, it is easier to differentiate between less and more bulky silyl groups. Therefore, acidic deprotection occurs fastest for less sterically bulky alkyl silyl groups. In basic conditions, alkyl substituents acting as electron donating groups decrease reaction rate.


Enolate Trapping

Silylation can also be used to trap reactive compounds for isolation or identification. A common example of this is by trapping reactive enolates into
silyl enol ethers In organosilicon chemistry, silyl enol ethers are a class of organic compounds that share the common functional group , composed of an enolate () bonded to a silane () through its oxygen end and an ethene group () as its carbon end. They are imp ...
, which represent reactive tautomers of many carbonyl compounds. The original enolate can be reformed upon reaction with an organolithium, or other strong base.


Applications in Analysis

The introduction of a silyl group(s) gives derivatives of enhanced volatility, making the derivatives suitable for analysis by
gas chromatography Gas chromatography (GC) is a common type of chromatography used in analytical chemistry for Separation process, separating and analyzing compounds that can be vaporized without Chemical decomposition, decomposition. Typical uses of GC include t ...
and electron-impact
mass spectrometry Mass spectrometry (MS) is an analytical technique that is used to measure the mass-to-charge ratio of ions. The results are presented as a ''mass spectrum'', a plot of intensity as a function of the mass-to-charge ratio. Mass spectrometry is used ...
(EI-MS). For EI-MS, the silyl derivatives give more favorable diagnostic
fragmentation pattern In mass spectrometry, fragmentation is the dissociation of energetically unstable molecular ions formed from passing the molecules mass spectrum. These reactions are well documented over the decades and fragmentation patterns are useful to determ ...
s of use in structure investigations, or characteristic ions of use in trace analyses employing selected ion monitoring and related techniques.


Of metals

Coordination complex A coordination complex is a chemical compound consisting of a central atom or ion, which is usually metallic and is called the ''coordination centre'', and a surrounding array of chemical bond, bound molecules or ions, that are in turn known as ' ...
es with silyl ligands are well known. An early example is CpFe(CO)2Si(CH3)3, prepared by silylation of CpFe(CO)2Na with
trimethylsilyl chloride Trimethylsilyl chloride, also known as chlorotrimethylsilane is an organosilicon compound ( silyl halide), with the formula , often abbreviated or TMSCl. It is a colourless volatile liquid that is stable in the absence of water. It is widely u ...
. Typical routes include
oxidative addition Oxidative addition and reductive elimination are two important and related classes of reactions in organometallic chemistry. Oxidative addition is a process that increases both the oxidation state and coordination number of a metal centre. Oxidat ...
of Si-H bonds to low-valent metals. Metal silyl complexes are intermediates in
hydrosilation Hydrosilylation, also called catalytic hydrosilation, describes the addition of Si-H bonds across unsaturated bonds."Hydrosilylation A Comprehensive Review on Recent Advances" B. Marciniec (ed.), Advances in Silicon Science, Springer Science, 200 ...
, a process used to make
organosilicon compound Organosilicon chemistry is the study of organometallic compounds containing carbon–silicon bonds, to which they are called organosilicon compounds. Most organosilicon compounds are similar to the ordinary organic compounds, being colourless, f ...
s on both laboratory and commercial scales.


See also

*
Silyl ether Silyl ethers are a group of chemical compounds which contain a silicon atom covalently bonded to an alkoxy group. The general structure is R1R2R3Si−O−R4 where R4 is an alkyl group or an aryl group. Silyl ethers are usually used as protectin ...
*
Hydrosilylation Hydrosilylation, also called catalytic hydrosilation, describes the addition of Si-H bonds across unsaturated bonds."Hydrosilylation A Comprehensive Review on Recent Advances" B. Marciniec (ed.), Advances in Silicon Science, Springer Science, 200 ...


References

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External links


Identification of Silylation Artifacts in Derivatization Reactions for Gas Chromatography

Desilylation methods
Chemical processes Organosilicon compounds