Silicoflagellata
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The silicoflagellates (order Dictyochales) are a small group of
unicellular A unicellular organism, also known as a single-celled organism, is an organism that consists of a single cell, unlike a multicellular organism that consists of multiple cells. Organisms fall into two general categories: prokaryotic organisms and ...
photosynthetic Photosynthesis ( ) is a Biological system, system of biological processes by which Photoautotrophism, photosynthetic organisms, such as most plants, algae, and cyanobacteria, convert light energy, typically from sunlight, into the chemical ener ...
protist A protist ( ) or protoctist is any eukaryotic organism that is not an animal, land plant, or fungus. Protists do not form a natural group, or clade, but are a paraphyletic grouping of all descendants of the last eukaryotic common ancest ...
s, or
algae Algae ( , ; : alga ) is an informal term for any organisms of a large and diverse group of photosynthesis, photosynthetic organisms that are not plants, and includes species from multiple distinct clades. Such organisms range from unicellular ...
, belonging to the supergroup of eukaryotes known as
Stramenopiles The stramenopiles, also called heterokonts, are Protist, protists distinguished by the presence of stiff tripartite external hairs. In most species, the hairs are attached to flagella, in some they are attached to other areas of the cellular sur ...
. They behave as
plankton Plankton are the diverse collection of organisms that drift in Hydrosphere, water (or atmosphere, air) but are unable to actively propel themselves against ocean current, currents (or wind). The individual organisms constituting plankton are ca ...
and are present in oceanic waters. They are well-known from harmful algal blooms that cause high mortality of
fish A fish (: fish or fishes) is an aquatic animal, aquatic, Anamniotes, anamniotic, gill-bearing vertebrate animal with swimming fish fin, fins and craniate, a hard skull, but lacking limb (anatomy), limbs with digit (anatomy), digits. Fish can ...
. Additionally, they compose a rich
fossil record A fossil (from Classical Latin , ) is any preserved remains, impression, or trace of any once-living thing from a past geological age. Examples include bones, shells, exoskeletons, stone imprints of animals or microbes, objects preserved ...
represented by their silica skeletons.


Morphology

The silicoflagellates are unicellular
protist A protist ( ) or protoctist is any eukaryotic organism that is not an animal, land plant, or fungus. Protists do not form a natural group, or clade, but are a paraphyletic grouping of all descendants of the last eukaryotic common ancest ...
s, composed of cells with one emergent
flagellum A flagellum (; : flagella) (Latin for 'whip' or 'scourge') is a hair-like appendage that protrudes from certain plant and animal sperm cells, from fungal spores ( zoospores), and from a wide range of microorganisms to provide motility. Many pr ...
and a siliceous skeleton constructed from a network of hollow rods outside of the
cytoplasm The cytoplasm describes all the material within a eukaryotic or prokaryotic cell, enclosed by the cell membrane, including the organelles and excluding the nucleus in eukaryotic cells. The material inside the nucleus of a eukaryotic cell a ...
. The morphology of the skeleton can vary greatly, from a simple ring, an ellipse or triangle, to a more complex and complete arrangement of rods. For example, in '' Dictyocha fibula'' (pictured) the skeleton rods are arranged in a series of peripheral polygons surrounding a central hexagon. These skeletons form a small component of
marine sediment Marine sediment, or ocean sediment, or seafloor sediment, are deposits of insoluble particles that have accumulated on the seafloor. These particles either have their origins in soil and Rock (geology), rocks and have been Sediment transport, ...
s, and are well-known
microfossil A microfossil is a fossil that is generally between 0.001 mm and 1 mm in size, the visual study of which requires the use of light or electron microscopy. A fossil which can be studied with the naked eye or low-powered magnification, ...
s dating as far back as the
early Cretaceous The Early Cretaceous (geochronology, geochronological name) or the Lower Cretaceous (chronostratigraphy, chronostratigraphic name) is the earlier or lower of the two major divisions of the Cretaceous. It is usually considered to stretch from 143.1 ...
. The silicoflagellates are considered
algae Algae ( , ; : alga ) is an informal term for any organisms of a large and diverse group of photosynthesis, photosynthetic organisms that are not plants, and includes species from multiple distinct clades. Such organisms range from unicellular ...
due to being
photosynthetic Photosynthesis ( ) is a Biological system, system of biological processes by which Photoautotrophism, photosynthetic organisms, such as most plants, algae, and cyanobacteria, convert light energy, typically from sunlight, into the chemical ener ...
. Their
chloroplast A chloroplast () is a type of membrane-bound organelle, organelle known as a plastid that conducts photosynthesis mostly in plant cell, plant and algae, algal cells. Chloroplasts have a high concentration of chlorophyll pigments which captur ...
s are usually present inside the numerous cytoplasmic processes that extend from the central mass of the
cytoplasm The cytoplasm describes all the material within a eukaryotic or prokaryotic cell, enclosed by the cell membrane, including the organelles and excluding the nucleus in eukaryotic cells. The material inside the nucleus of a eukaryotic cell a ...
, where the
cell nucleus The cell nucleus (; : nuclei) is a membrane-bound organelle found in eukaryote, eukaryotic cell (biology), cells. Eukaryotic cells usually have a single nucleus, but a few cell types, such as mammalian red blood cells, have #Anucleated_cells, ...
is located. There is a possibility that silicoflagellate chloroplasts are derived from haptophyte algae through tertiary endosymbiosis.


Ecology

Silicoflagellates are
photosynthetic Photosynthesis ( ) is a Biological system, system of biological processes by which Photoautotrophism, photosynthetic organisms, such as most plants, algae, and cyanobacteria, convert light energy, typically from sunlight, into the chemical ener ...
microscopic
algae Algae ( , ; : alga ) is an informal term for any organisms of a large and diverse group of photosynthesis, photosynthetic organisms that are not plants, and includes species from multiple distinct clades. Such organisms range from unicellular ...
present in the upper part of the marine water
column A column or pillar in architecture and structural engineering is a structural element that transmits, through compression, the weight of the structure above to other structural elements below. In other words, a column is a compression member ...
, as
plankton Plankton are the diverse collection of organisms that drift in Hydrosphere, water (or atmosphere, air) but are unable to actively propel themselves against ocean current, currents (or wind). The individual organisms constituting plankton are ca ...
. They are adapted to both warm and cold waters. Similarly to
diatoms A diatom (Neo-Latin ''diatoma'') is any member of a large group comprising several Genus, genera of algae, specifically microalgae, found in the oceans, waterways and soils of the world. Living diatoms make up a significant portion of Earth's B ...
, silicoflagellates are most productive where high levels of
silica Silicon dioxide, also known as silica, is an oxide of silicon with the chemical formula , commonly found in nature as quartz. In many parts of the world, silica is the major constituent of sand. Silica is one of the most complex and abundant f ...
and nutrients are present in near-surface waters. They are known to cause harmful algal blooms, or
red tide A harmful algal bloom (HAB), or excessive algae growth, sometimes called a red tide in marine environments, is an algal bloom that causes negative impacts to other organisms by production of natural algae-produced toxins, water deoxygenation, ...
s, in many parts of Europe. Blooms of silicoflagellates cause
fish A fish (: fish or fishes) is an aquatic animal, aquatic, Anamniotes, anamniotic, gill-bearing vertebrate animal with swimming fish fin, fins and craniate, a hard skull, but lacking limb (anatomy), limbs with digit (anatomy), digits. Fish can ...
mortality because their silica skeletons obstruct and abrade
fish gill Fish gills are Organ (anatomy), organs that allow fish to Aquatic respiration, breathe underwater. Most fish Respiration (physiology), exchange gases like oxygen and carbon dioxide using gills on both sides of the pharynx (throat). Gills posse ...
s, leading to asphyxiation and subsequent death. Additionally, some silicoflagellates are thought to produce ichthyotoxins, i.e. substances toxic to fish, although their effect is debated. Apart from physical damage to fish, the depletion of
dissolved oxygen Oxygen saturation (symbol SO2) is a relative measure of the concentration of oxygen that is dissolved or carried in a given medium as a proportion of the maximal concentration that can be dissolved in that medium at the given temperature. It can ...
in water due to their
cellular respiration Cellular respiration is the process of oxidizing biological fuels using an inorganic electron acceptor, such as oxygen, to drive production of adenosine triphosphate (ATP), which stores chemical energy in a biologically accessible form. Cell ...
during bloom growth has also caused fish mortality in fisheries and aquaculture.


Systematics


Taxonomy

In
biological classification In biology, taxonomy () is the scientific study of naming, defining ( circumscribing) and classifying groups of biological organisms based on shared characteristics. Organisms are grouped into taxa (singular: taxon), and these groups are give ...
, silicoflagellates compose the family Dictyochaceae (in
botanical nomenclature Botanical nomenclature is the formal, scientific naming of plants. It is related to, but distinct from taxonomy (biology), taxonomy. Plant taxonomy is concerned with grouping and classifying plants; Botany, botanical nomenclature then provides na ...
) or Dictyochidae (in
zoological nomenclature The International Code of Zoological Nomenclature (ICZN) is a widely accepted convention in zoology that rules the formal scientific naming of organisms treated as animals. It is also informally known as the ICZN Code, for its formal author, t ...
), contained within the order Dictyochales or Silicoflagellata. They were previously classified as
Chrysophyceae The Chrysophyceae, usually called chrysophytes, chrysomonads, golden-brown algae, or golden algae, are a large group of algae, found mostly in freshwater. Golden algae is also commonly used to refer to a single species, '' Prymnesium parvum'', wh ...
(golden algae). Through morphological and molecular similarities, this group was eventually transferred to the Dictyochophyceae, which contains three additional orders, Pedinellales, Florenciellales and Rhizochromulinales. After decades of
phylogenetic analyses In biology, phylogenetics () is the study of the evolutionary history of life using observable characteristics of organisms (or genes), which is known as Computational phylogenetics, phylogenetic inference. It infers the relationship among organ ...
, silicoflagellates and the rest of Dictyochophyceae are accepted as a class of the phylum
Ochrophyta Ochrophytes, also known as heterokontophytes or stramenochromes, are a phylum of algae. They are the photosynthetic stramenopiles, a group of eukaryotes, organisms with a cell nucleus, characterized by the presence of two unequal flagella, one o ...
, within the eukaryotic supergroup
Stramenopiles The stramenopiles, also called heterokonts, are Protist, protists distinguished by the presence of stiff tripartite external hairs. In most species, the hairs are attached to flagella, in some they are attached to other areas of the cellular sur ...
.


Genera

There are four living genera: '' Dictyocha'', ''
Octactis ''Octactis'' is a genus of silicoflagellates, marine photosynthetic unicellular protists that take the form of either flagellates or axopodial amoebae. Described by Josef Schiller in 1925, ''Octactis'' contains various species of marine phy ...
'', '' Stephanocha'' (earlier known as ''Distephanus'',
homonymous In linguistics, homonyms are words which are either; ''homographs''—words that mean different things, but have the same spelling (regardless of pronunciation), or ''homophones''—words that mean different things, but have the same pronunciatio ...
with the
flowering plant Flowering plants are plants that bear flowers and fruits, and form the clade Angiospermae (). The term angiosperm is derived from the Ancient Greek, Greek words (; 'container, vessel') and (; 'seed'), meaning that the seeds are enclosed with ...
'' Distephanus'') and '' Vicicitus'', with 11 recognised living species. ''Dictyocha'' was previously the only member of the order, until ''Vicicitus'' was created for a species previously assigned to the raphidophyte '' Chattonella'' but later proven to be a Dictyochophyceae through
phylogenetic analyses In biology, phylogenetics () is the study of the evolutionary history of life using observable characteristics of organisms (or genes), which is known as Computational phylogenetics, phylogenetic inference. It infers the relationship among organ ...
. * '' Dictyocha'' — 4 spp. * ''
Octactis ''Octactis'' is a genus of silicoflagellates, marine photosynthetic unicellular protists that take the form of either flagellates or axopodial amoebae. Described by Josef Schiller in 1925, ''Octactis'' contains various species of marine phy ...
'' — 2 spp. * '' Stephanocha'' (=''Distephanus'' ) — 4 spp. * '' Vicicitus'' — 1 sp. There are also several extinct genera, but their classification is difficult, since skeletons may show diverse forms within each living species. * †'' Arctyocha'' — 3 spp. * †'' Corbisema'' — 5 spp. * †'' Cornua'' — 6 spp. * †'' Gleserocha'' — 3 spp. * †'' Lyramula'' — 2 spp. * †'' Schulzyocha'' — 5 spp. * †'' Umpiocha'' — 2 spp. * †'' Vallacerta'' — 5 spp. * †'' Variramus'' — 2 spp.


Evolution

The
fossil record A fossil (from Classical Latin , ) is any preserved remains, impression, or trace of any once-living thing from a past geological age. Examples include bones, shells, exoskeletons, stone imprints of animals or microbes, objects preserved ...
of silicoflagellates extends back to early
Albian The Albian is both an age (geology), age of the geologic timescale and a stage (stratigraphy), stage in the stratigraphic column. It is the youngest or uppermost subdivision of the Early Cretaceous, Early/Lower Cretaceous epoch (geology), Epoch/s ...
times, in the
Early Cretaceous The Early Cretaceous (geochronology, geochronological name) or the Lower Cretaceous (chronostratigraphy, chronostratigraphic name) is the earlier or lower of the two major divisions of the Cretaceous. It is usually considered to stretch from 143.1 ...
, around 115 million years ago. However, data on
Late Cretaceous The Late Cretaceous (100.5–66 Ma) is the more recent of two epochs into which the Cretaceous Period is divided in the geologic time scale. Rock strata from this epoch form the Upper Cretaceous Series. The Cretaceous is named after ''cre ...
and
Paleocene The Paleocene ( ), or Palaeocene, is a geological epoch (geology), epoch that lasted from about 66 to 56 mya (unit), million years ago (mya). It is the first epoch of the Paleogene Period (geology), Period in the modern Cenozoic Era (geology), ...
silicoflagellate evolution is sparse, and they are best known from the
Eocene The Eocene ( ) is a geological epoch (geology), epoch that lasted from about 56 to 33.9 million years ago (Ma). It is the second epoch of the Paleogene Period (geology), Period in the modern Cenozoic Era (geology), Era. The name ''Eocene'' comes ...
to Recent era. Silicoflagellate skeletons from the
Cretaceous The Cretaceous ( ) is a geological period that lasted from about 143.1 to 66 mya (unit), million years ago (Mya). It is the third and final period of the Mesozoic Era (geology), Era, as well as the longest. At around 77.1 million years, it is the ...
are markedly different from
Cenozoic The Cenozoic Era ( ; ) is Earth's current geological era, representing the last 66million years of Earth's history. It is characterized by the dominance of mammals, insects, birds and angiosperms (flowering plants). It is the latest of three g ...
ones: before the
Santonian The Santonian is an age in the geologic timescale or a chronostratigraphic stage. It is a subdivision of the Late Cretaceous Epoch or Upper Cretaceous Series. It spans the time between 86.3 ± 0.7 mya ( million years ago) and 83.6 ± 0.7 m ...
(around 85 million years ago) they presented branched, non-ringed shapes. During the
Cenozoic The Cenozoic Era ( ; ) is Earth's current geological era, representing the last 66million years of Earth's history. It is characterized by the dominance of mammals, insects, birds and angiosperms (flowering plants). It is the latest of three g ...
, silicoflagellates show an evolutionary trend towards more complicated apical and basal structures, resulting in a design that resembles a
hemisphere Hemisphere may refer to: In geometry * Hemisphere (geometry), a half of a sphere As half of Earth or any spherical astronomical object * A hemisphere of Earth ** Northern Hemisphere ** Southern Hemisphere ** Eastern Hemisphere ** Western Hemi ...
. As a consequence, after
mitosis Mitosis () is a part of the cell cycle in eukaryote, eukaryotic cells in which replicated chromosomes are separated into two new Cell nucleus, nuclei. Cell division by mitosis is an equational division which gives rise to genetically identic ...
, the pair of
daughter cell Cell division is the process by which a parent cell divides into two daughter cells. Cell division usually occurs as part of a larger cell cycle in which the cell grows and replicates its chromosome(s) before dividing. In eukaryotes, there ar ...
skeletons resembles a near-sphere.


References

{{Taxonbar, from1=Q18679042, from2=Q25367446 Dictyochophyceae Ochrophyte orders Taxa described in 1894