''Rhodomicrobium vannielii'' is a
Gram-negative
Gram-negative bacteria are bacteria that, unlike gram-positive bacteria, do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. Their defining characteristic is that their cell envelope consists ...
,
purple non-sulfur, motile,
thermophilic
A thermophile is a type of extremophile that thrives at relatively high temperatures, between . Many thermophiles are archaea, though some of them are bacteria and fungi. Thermophilic eubacteria are suggested to have been among the earliest bact ...
photoheterotroph
Photoheterotrophs (''Greek language, Gk'': ''photo'' = light, ''hetero'' = (an)other, ''troph'' = nourishment) are heterotrophic phototrophs—that is, they are organisms that use light for energy, but cannot use carbon dioxide as their sole carbon ...
bacterium.
Phototrophic bacteria are ubiquitous and have been reportedly found in many marine and terrestrial ecosystems.
Additionally, they can use light as an energy source and carbon dioxide as a carbon source. Considering this, ''R. vannielii'' is thought to have potential application in
anaerobic
Anaerobic means "living, active, occurring, or existing in the absence of free oxygen", as opposed to aerobic which means "living, active, or occurring only in the presence of oxygen." Anaerobic may also refer to:
*Adhesive#Anaerobic, Anaerobic ad ...
treatment and
bioremediation
Bioremediation broadly refers to any process wherein a biological system (typically bacteria, microalgae, fungi in mycoremediation, and plants in phytoremediation), living or dead, is employed for removing environmental pollutants from air, wate ...
under high temperature conditions as the bacteria was isolated from water samples from a hot spring in Gadek, Malacca, Malaysia using glutamate-malate medium (GMM) and Pfennig's M2 medium.
''R. vannielii'' produces
acyclic and
aliphatic
In organic chemistry, hydrocarbons ( compounds composed solely of carbon and hydrogen) are divided into two classes: aromatic compounds and aliphatic compounds (; G. ''aleiphar'', fat, oil). Aliphatic compounds can be saturated (in which all ...
cyclic
carotenoids
Carotenoids () are yellow, orange, and red organic compound, organic pigments that are produced by plants and algae, as well as several bacteria, archaea, and Fungus, fungi. Carotenoids give the characteristic color to pumpkins, carrots, parsnips ...
like anhydrorhodovibrin, rhodovibrin, spirilloxanthin and
rhodopin
Rhodopin (1,2-dihydro-ψ,ψ-caroten-1-ol) is a carotenoid. It is a major carotenoid of phototropic
In biology, phototropism is the growth of an organism in response to a light stimulus. Phototropism is most often observed in plants, but ca ...
.
Microbiologic characteristics
Morphology
Mature ''R. vannielii'' cells are typically ovoid to spherical in shape, do not form intracellular sulfur globules, and are about 2.0-2.5 μm long and 1.2-1.5 μm wide. The cells are then attached by means of slender branched filaments, with the connecting filaments varying in length, but a uniform diameter of approximately 0.3 microns. Colonies are irregular in shape, and have a rough, convoluted surface. After observation, the cells showed a budding filament formation. R. vannielli is unique as it is the only species of its genus to reproduce via
budding
Budding or blastogenesis is a type of asexual reproduction in which a new organism develops from an outgrowth or bud due to cell division at one particular site. For example, the small bulb-like projection coming out from the yeast cell is kno ...
rather than
fission.
Pigmentation
''R. vannielii'' contains
carotenoid
Carotenoids () are yellow, orange, and red organic pigments that are produced by plants and algae, as well as several bacteria, archaea, and fungi. Carotenoids give the characteristic color to pumpkins, carrots, parsnips, corn, tomatoes, cana ...
pigments, which gives its cultures a salmon-pink to a deep orange-red color, depending on the density of growth.
The dominant
photosynthetic
Photosynthesis ( ) is a Biological system, system of biological processes by which Photoautotrophism, photosynthetic organisms, such as most plants, algae, and cyanobacteria, convert light energy, typically from sunlight, into the chemical ener ...
pigment is
bacteriochlorophylla and carotenoids of rhodopsin and lycopene.
Optimum carotenoid production was achieved after the culture spent 24 hours in GMM without yeast-extract and having been incubated in anaerobic-light condition at a light intensity of 2000 lux.
''R. vannielii''’s growth rate was measured as optical density at a wavelength of 660 nm.
Metabolism
''R. vannielii'' is an
anoxygenic bacteria, meaning it uses light as an energy source and converts it into ATP without the production of oxygen as a byproduct of the reaction. ''R. vannielii'' grows better in anaerobic-light conditions compared to growth in aerobic-dark.
This growth shows that cells are capable of also growing
chemoheterophically in the dark, meaning it can derive its energy from chemical energy sources as well as from sunlight. However, the microbe cannot use carbon dioxide as its sole carbon source, but requires other compounds from the environment to meet their carbon requirements. ''R. vannielii'' is able to utilize acetate, lactate, pyruvate, citrate and succinate as a carbon source. However, cell growth and carotenoid production is highest when succinate or acetate is used as substrate after 48-hours of incubation.
Environment
Water samples were first isolated from Gadek Hot Spring in Malacca,
Malaysia
Malaysia is a country in Southeast Asia. Featuring the Tanjung Piai, southernmost point of continental Eurasia, it is a federation, federal constitutional monarchy consisting of States and federal territories of Malaysia, 13 states and thre ...
, at a depth of 0.8-1.4 m from the water surface using an extendable metal sampler.
The water samples were isolated on two media: (i) glutamate-malate medium (GMM), and (ii) Pfennig’s M2 medium. All inoculated bottles were incubated using 60 W (Morries) tungsten lamps at 2000 lux light intensity of continuous illumination with a temperature ranging between 38-40 °C.
After 7 days of incubation, the GMM media changed color from transparent yellow to red. Growth in the M2 medium, however, was slower as pink to light red color appeared after more than 10 days incubation. It was found that ''R. vannielii’''s temperature optima was approximately 50 °C to 58 °C, while its pH optima ranged from 6.8 to 7.3. The microorganism’s optimum light intensity for carotenoid production was 2000 lux.
Phenotypic and genetic characteristics
On average, ''R. vannielii’''s
genome
A genome is all the genetic information of an organism. It consists of nucleotide sequences of DNA (or RNA in RNA viruses). The nuclear genome includes protein-coding genes and non-coding genes, other functional regions of the genome such as ...
size is approximately 400 base pairs, is motile, stains Gram-negative, and has a
G+C content
G, or g, is the seventh letter of the Latin alphabet, used in the modern English alphabet, the alphabets of other western European languages, and others worldwide. Its name in English is ''gee'' (pronounced ), plural ''gees''.
The lower ...
of 62.2%.
In 1949, it was debated on whether ''R. vannielii'' was to be placed in the genus ''Rhodospirillum'' or ''
Rhodopseudomonas
''Rhodopseudomonas'' is a genus of bacteria from the family Nitrobacteraceae.
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature
List of Prokaryotic names with Standing in Nomen ...
'' because the photoheterotrophs were all closely related morphologically.
However, subsequent studies of the
physiology
Physiology (; ) is the science, scientific study of function (biology), functions and mechanism (biology), mechanisms in a life, living system. As a branches of science, subdiscipline of biology, physiology focuses on how organisms, organ syst ...
and
morphology
Morphology, from the Greek and meaning "study of shape", may refer to:
Disciplines
*Morphology (archaeology), study of the shapes or forms of artifacts
*Morphology (astronomy), study of the shape of astronomical objects such as nebulae, galaxies, ...
of several pure ''R. vannielii'' cultures have led researchers to create a new genus for this organism: ''
Rhodomicrobium
''Rhodomicrobium'' is a microaerobic to anaerobic, purple non-sulfur, cluster-building genus of bacteria. ''Rhodomicrobium'' uses bacteriochlorophyll a and bacteriochlorophyll b for photosynthesis
Photosynthesis ( ) is a system of bio ...
''. This name was chosen to honor Professor
C. B. van Niel as his studies of ''R. vannielii'' heavily contributed to what is currently known regarding the group of microorganisms.
References
Further reading
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External links
Type strain of ''Rhodomicrobium vannielii'' at Bac''Dive'' - the Bacterial Diversity Metadatabase
{{Taxonbar, from=Q3934130
Hyphomicrobiales
Bacteria described in 1949