Non-legume Nitrogen Fixer
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Actinorhizal plants are a group of
angiosperms Flowering plants are plants that bear flowers and fruits, and form the clade Angiospermae (). The term angiosperm is derived from the Greek words (; 'container, vessel') and (; 'seed'), meaning that the seeds are enclosed within a fruit. T ...
characterized by their ability to form a
symbiosis Symbiosis (Ancient Greek : living with, companionship < : together; and ''bíōsis'': living) is any type of a close and long-term biological interaction, between two organisms of different species. The two organisms, termed symbionts, can fo ...
with the
nitrogen fixing Nitrogen fixation is a chemical process by which molecular dinitrogen () is converted into ammonia (). It occurs both biologically and abiologically in chemical industries. Biological nitrogen fixation or ''diazotrophy'' is catalyzed by en ...
actinomycetota The Actinomycetota (or Actinobacteria) are a diverse phylum of Gram-positive bacteria with high GC content. They can be terrestrial or aquatic. They are of great importance to land flora because of their contributions to soil systems. In soil t ...
''
Frankia ''Frankia'' is a genus of nitrogen-fixing bacteria that live in symbiosis with actinorhizal plants, similar to the '' Rhizobium'' bacteria found in the root nodules of legumes in the family Fabaceae. ''Frankia'' also initiate the forming of ro ...
''. This association leads to the formation of nitrogen-fixing root nodules. Actinorhizal plants are distributed within three clades, and are characterized by nitrogen fixation. They are distributed globally, and are pioneer species in nitrogen-poor environments. Their symbiotic relationships with Frankia evolved independently over time, and the symbiosis occurs in the root nodule infection site.


Classification

Actinorhizal plants are
dicotyledons The dicotyledons, also known as dicots (or, more rarely, dicotyls), are one of the two groups into which all the flowering plants (angiosperms) were formerly divided. The name refers to one of the typical characteristics of the group: namely, ...
distributed within 3
orders Order, ORDER or Orders may refer to: * A socio-political or established or existing order, e.g. World order, Ancien Regime, Pax Britannica * Categorization, the process in which ideas and objects are recognized, differentiated, and understood * H ...
, 8
families Family (from ) is a group of people related either by consanguinity (by recognized birth) or affinity (by marriage or other relationship). It forms the basis for social order. Ideally, families offer predictability, structure, and safety as ...
and 26
genera Genus (; : genera ) is a taxonomic rank above species and below family as used in the biological classification of living and fossil organisms as well as viruses. In binomial nomenclature, the genus name forms the first part of the binomial s ...
, of the
angiosperm Flowering plants are plants that bear flowers and fruits, and form the clade Angiospermae (). The term angiosperm is derived from the Greek words (; 'container, vessel') and (; 'seed'), meaning that the seeds are enclosed within a fruit ...
clade. All nitrogen fixing plants are classified under the "Nitrogen-Fixing Clade", which consists of the three actinorhizal plant orders, as well as the order
fabales Fabales is an order of flowering plants included in the rosid group of the eudicots in the Angiosperm Phylogeny Group II classification system. In the APG II circumscription, this order includes the families Fabaceae or legumes (including the s ...
. The most well-known nitrogen fixing plants are the
legumes Legumes are plants in the pea family Fabaceae (or Leguminosae), or the fruit or seeds of such plants. When used as a dry grain for human consumption, the seeds are also called pulses. Legumes are grown agriculturally, primarily for human consu ...
, but they are not classified as actinorhizal plants. The actinorhizal species are either trees or shrubs, except for those in the genus '' Datisca'' which are herbs. Other species of actinorhizal plants are common in temperate regions like
alder Alders are trees of the genus ''Alnus'' in the birch family Betulaceae. The genus includes about 35 species of monoecious trees and shrubs, a few reaching a large size, distributed throughout the north temperate zone with a few species ex ...
, bayberry, sweetfern, avens, mountain misery and '' coriaria''. Some ''
Elaeagnus ''Elaeagnus'' () is a genus of flowering plants in the family (biology), family Elaeagnaceae. Some species of the genus are commonly known as silverberry or oleaster, Description ''Elaeagnus'' plants are deciduous or evergreen shrubs or smal ...
'' species, such as sea-buckthorns produce edible fruit. What characterizes an actinorhizal plant is the symbiotic relationship it forms with the bacteria
Frankia ''Frankia'' is a genus of nitrogen-fixing bacteria that live in symbiosis with actinorhizal plants, similar to the '' Rhizobium'' bacteria found in the root nodules of legumes in the family Fabaceae. ''Frankia'' also initiate the forming of ro ...
, in which they infect the roots of the plant. This relationship is what is responsible for the nitrogen-fixation qualities of the plants, and what makes them important to nitrogen-poor environments.


Distribution and ecology

Actinorhizal plants are found on all continents except for
Antarctica Antarctica () is Earth's southernmost and least-populated continent. Situated almost entirely south of the Antarctic Circle and surrounded by the Southern Ocean (also known as the Antarctic Ocean), it contains the geographic South Pole. ...
. Their ability to form nitrogen-fixing nodules confers a selective advantage in poor soils, and are therefore
pioneer species Pioneer species are resilient species that are the first to colonize barren environments, or to repopulate disrupted biodiverse steady-state ecosystems as part of ecological succession. Various kinds of events can create good conditions for pi ...
where available
nitrogen Nitrogen is a chemical element; it has Symbol (chemistry), symbol N and atomic number 7. Nitrogen is a Nonmetal (chemistry), nonmetal and the lightest member of pnictogen, group 15 of the periodic table, often called the Pnictogen, pnictogens. ...
is scarce, such as
moraine A moraine is any accumulation of unconsolidated debris (regolith and Rock (geology), rock), sometimes referred to as glacial till, that occurs in both currently and formerly glaciated regions, and that has been previously carried along by a gla ...
s, volcanic flows or sand dunes. Being among the first species to colonize these disturbed environments, actinorhizal shrubs and trees play a critical role, enriching the soil and enabling the establishment of other species in an
ecological succession Ecological succession is the process of how species compositions change in an Community (ecology), ecological community over time. The two main categories of ecological succession are primary succession and secondary succession. Primary successi ...
. Actinorhizal plants like alders are also common in the
riparian forest A riparian forest or riparian woodland is a forested or wooded area of land adjacent to a body of water such as a river, stream, pond, lake, marshland, estuary, canal, Sink (geography), sink, or reservoir. Due to the broad nature of the definitio ...
. They are also major contributors to nitrogen fixation in broad areas of the world, and are particularly important in temperate forests. The nitrogen fixation rates measured for some
alder Alders are trees of the genus ''Alnus'' in the birch family Betulaceae. The genus includes about 35 species of monoecious trees and shrubs, a few reaching a large size, distributed throughout the north temperate zone with a few species ex ...
species are as high as 300 kg of N2/ha/year, close to the highest rate reported in
legumes Legumes are plants in the pea family Fabaceae (or Leguminosae), or the fruit or seeds of such plants. When used as a dry grain for human consumption, the seeds are also called pulses. Legumes are grown agriculturally, primarily for human consu ...
.


Evolutionary origin

No fossil records are available concerning nodules, but fossil pollen of plants similar to modern actinorhizal species has been found in sediments deposited 87 million years ago. The origin of the symbiotic association remains uncertain. The ability to associate with ''Frankia'' is a
polyphyletic A polyphyletic group is an assemblage that includes organisms with mixed evolutionary origin but does not include their most recent common ancestor. The term is often applied to groups that share similar features known as Homoplasy, homoplasies ...
character and has probably evolved independently in different
clade In biology, a clade (), also known as a Monophyly, monophyletic group or natural group, is a group of organisms that is composed of a common ancestor and all of its descendants. Clades are the fundamental unit of cladistics, a modern approach t ...
s. Nevertheless, actinorhizal plants and Legumes, the two major nitrogen-fixing groups of plants share a relatively close ancestor, as they are all part of a
clade In biology, a clade (), also known as a Monophyly, monophyletic group or natural group, is a group of organisms that is composed of a common ancestor and all of its descendants. Clades are the fundamental unit of cladistics, a modern approach t ...
within the rosids which is often called the ''nitrogen-fixing clade''. This ancestor may have developed a "predisposition" to enter into symbiosis with nitrogen fixing bacteria and this led to the independent acquisition of symbiotic abilities by ancestors of the actinorhizal and Legume species. The genetic program used to establish the symbiosis has probably recruited elements of the arbuscular
mycorrhiza A mycorrhiza (; , mycorrhiza, or mycorrhizas) is a symbiotic association between a fungus and a plant. The term mycorrhiza refers to the role of the fungus in the plant's rhizosphere, the plant root system and its surroundings. Mycorrhizae play ...
l symbioses, a much older and widely distributed symbiotic association between plants and fungi.


The symbiotic nodules

As in legumes, nodulation is favored by nitrogen deprivation and is inhibited by high nitrogen concentrations. Depending on the plant species, two mechanisms of infection have been described: The first is observed in casuarinas or alders and is called root hair infection. In this case the infection begins with an intracellular penetration of a
Frankia ''Frankia'' is a genus of nitrogen-fixing bacteria that live in symbiosis with actinorhizal plants, similar to the '' Rhizobium'' bacteria found in the root nodules of legumes in the family Fabaceae. ''Frankia'' also initiate the forming of ro ...
hyphae A hypha (; ) is a long, branching, filamentous structure of a fungus, oomycete, or actinobacterium. In most fungi, hyphae are the main mode of vegetative growth, and are collectively called a mycelium. Structure A hypha consists of one o ...
root hair Soil biology Root hairs or absorbent hairs, are outgrowths of epidermal cells, specialized cells at the tip of a plant root. They are lateral extensions of a single cell and are only rarely branched. They are found in the region of maturation, of ...
, and is followed by the formation of a primitive symbiotic organ known as a prenodule. The second mechanism of infection is called intercellular entry and is well described in ''Discaria'' species. In this case bacteria penetrate the root extracellularly, growing between epidermal cells then between cortical cells. Later on ''Frankia'' becomes intracellular but no prenodule is formed. In both cases the infection leads to cell divisions in the pericycle and the formation of a new organ consisting of several lobes anatomically similar to a lateral root. Cortical cells of the nodule are invaded by ''Frankia'' filaments coming from the site of infection/the prenodule. Actinorhizal nodules have generally an indeterminate growth, new cells are therefore continually produced at the apex and successively become infected. Mature cells of the nodule are filled with bacterial filaments that actively fix nitrogen. No equivalent of the rhizobial nod factors have been found, but several genes known to participate in the formation and functioning of Legume nodules (coding for haemoglobin and other nodulins) are also found in actinorhizal plants where they are supposed to play similar roles. The lack of genetic tools in ''Frankia'' and in actinorhizal species was the main factor explaining such a poor understating of this symbiosis, but the recent sequencing of 3 ''Frankia'' genomes and the development of RNAi and
genomic Genomics is an interdisciplinary field of molecular biology focusing on the structure, function, evolution, mapping, and editing of genomes. A genome is an organism's complete set of DNA, including all of its genes as well as its hierarchical, ...
tools in actinorhizal species should help to develop a far better understanding in the following years.


Notes


References

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External links


Frankia and Actinorhizal plant Website
{{DEFAULTSORT:Actinorhizal Plant Biogeochemical cycle Cycle Nitrogen cycle Soil biology Symbiosis