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''Metallosphaera sedula'' is a species of ''
Metallosphaera ''Metallosphaera'' is a genus of archaeans in the family Sulfolobaceae. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information ( ...
'' that is originally isolated from a volcanic field in
Italy Italy, officially the Italian Republic, is a country in Southern Europe, Southern and Western Europe, Western Europe. It consists of Italian Peninsula, a peninsula that extends into the Mediterranean Sea, with the Alps on its northern land b ...
. ''Metallosphaera sedula'' can be roughly translated into “metal mobilizing sphere” with the word “sedulus” meaning busy, describing its efficiency in mobilizing metals. ''M. sedula'' is a highly thermoacidophilic
Archaea Archaea ( ) is a Domain (biology), domain of organisms. Traditionally, Archaea only included its Prokaryote, prokaryotic members, but this has since been found to be paraphyletic, as eukaryotes are known to have evolved from archaea. Even thou ...
n that is unusually tolerant of heavy metals.


Significance

Due to its ability to oxidize pyrite (FeS2), ''M. sedula'' has the potential to be used for coal depyritization. With increased awareness of the environmental impact of the combustion of coals, the idea of coal pollution mitigation or “clean coal” was born. While there are several focuses of mitigation, one of which is the removal of impurities, such as sulfur found in pyrite, prior to combustion. The
combustion Combustion, or burning, is a high-temperature exothermic redox chemical reaction between a fuel (the reductant) and an oxidant, usually atmospheric oxygen, that produces oxidized, often gaseous products, in a mixture termed as smoke. Combustion ...
of
sulfur Sulfur ( American spelling and the preferred IUPAC name) or sulphur ( Commonwealth spelling) is a chemical element; it has symbol S and atomic number 16. It is abundant, multivalent and nonmetallic. Under normal conditions, sulfur atoms ...
leads to the formation of SO2, which has adverse health effects, and contributes to acid rain.
Abiotic In biology and ecology, abiotic components or abiotic factors are non-living chemical and physical parts of the environment that affect living organisms and the functioning of ecosystems. Abiotic factors and the phenomena associated with them und ...
removal of
pyrite The mineral pyrite ( ), or iron pyrite, also known as fool's gold, is an iron sulfide with the chemical formula Fe S2 (iron (II) disulfide). Pyrite is the most abundant sulfide mineral. Pyrite's metallic luster and pale brass-yellow hue ...
from
coal Coal is a combustible black or brownish-black sedimentary rock, formed as rock strata called coal seams. Coal is mostly carbon with variable amounts of other Chemical element, elements, chiefly hydrogen, sulfur, oxygen, and nitrogen. Coal i ...
is currently the preferred method, as opposed to biotic extraction via microorganisms; however, the process is feasible. Other
organism An organism is any life, living thing that functions as an individual. Such a definition raises more problems than it solves, not least because the concept of an individual is also difficult. Many criteria, few of them widely accepted, have be ...
s have been studied for the purpose of coal depyritization (for example, ''
Thiobacillus ferrooxidans ''Acidithiobacillus'' is a genus of the ''Acidithiobacillia'' in the phylum "''Pseudomonadota''". This genus includes ten species of acidophilic microorganisms capable of sulfur and/or iron oxidation: ''Acidithiobacillus albertensis, Acidithiobac ...
''); however, the process occurs at a slower rate than traditional abiotic removal. ''M. sedula'', being thermophilic, is tolerant of higher temperatures, which results in faster extraction rates than with other organisms, making it a strong candidate for future use in coal depyritization.


Genome structure

''M. sedula'' contains a single, circular
chromosome A chromosome is a package of DNA containing part or all of the genetic material of an organism. In most chromosomes, the very long thin DNA fibers are coated with nucleosome-forming packaging proteins; in eukaryotic cells, the most import ...
which is approximately 2.2 million base pairs in length. It encodes for approximately 2,300
protein Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residue (biochemistry), residues. Proteins perform a vast array of functions within organisms, including Enzyme catalysis, catalysing metab ...
s, some of which are necessary for metal tolerance and
adhesion Adhesion is the tendency of dissimilar particles or interface (matter), surfaces to cling to one another. (Cohesion (chemistry), Cohesion refers to the tendency of similar or identical particles and surfaces to cling to one another.) The ...
. The function for 35% of the proteins is currently unknown and for this reason they are called hypothetical proteins. Based on sequence comparisons, ''M. sedula'' is most closely related to members of the genus ''
Sulfolobus ''Sulfolobus'' is a genus of microorganism in the family Sulfolobaceae. It belongs to the kingdom Thermoproteati of the Archaea domain. ''Sulfolobus'' species grow in volcanic springs with optimal growth occurring at pH 2–3 and temperatu ...
''.


Cell structure, metabolism and life cycle

''M. sedula'' is a coccus, roughly 1  μm in diameter with pilus-like structures protruding from its surface when viewed via
electron microscopy An electron microscope is a microscope that uses a beam of electrons as a source of illumination. It uses electron optics that are analogous to the glass lenses of an optical light microscope to control the electron beam, for instance focusing i ...
. It is an obligate
aerobe An aerobic organism or aerobe is an organism that can survive and grow in an oxygenated environment. The ability to exhibit aerobic respiration may yield benefits to the aerobic organism, as aerobic respiration yields more energy than anaerobic ...
that grows best at 75 °C and pH 2.0. The high level of physiological diversity it displays is relatively unique amongst
extremophile An extremophile () is an organism that is able to live (or in some cases thrive) in extreme environments, i.e., environments with conditions approaching or stretching the limits of what known life can adapt to, such as extreme temperature, press ...
s. It is capable of
heterotrophic A heterotroph (; ) is an organism that cannot produce its own food, instead taking nutrition from other sources of organic carbon, mainly plant or animal matter. In the food chain, heterotrophs are primary, secondary and tertiary consumers, but ...
growth using complex organic molecules (with the exception of
sugar Sugar is the generic name for sweet-tasting, soluble carbohydrates, many of which are used in food. Simple sugars, also called monosaccharides, include glucose Glucose is a sugar with the Chemical formula#Molecular formula, molecul ...
s),
autotrophic An autotroph is an organism that can convert abiotic sources of energy into energy stored in organic compounds, which can be used by other organisms. Autotrophs produce complex organic compounds (such as carbohydrates, fats, and proteins) us ...
growth by the fixation of
carbon dioxide Carbon dioxide is a chemical compound with the chemical formula . It is made up of molecules that each have one carbon atom covalent bond, covalently double bonded to two oxygen atoms. It is found in a gas state at room temperature and at norma ...
in the presence of H2 through a proposed modified 3-hydroxypropionate cycle, and its highest rates of growth are seen when grown mixotropically on casamino acids and metal sulfides. The dissimilatory
oxidation Redox ( , , reduction–oxidation or oxidation–reduction) is a type of chemical reaction in which the oxidation states of the reactants change. Oxidation is the loss of electrons or an increase in the oxidation state, while reduction is ...
of
iron Iron is a chemical element; it has symbol Fe () and atomic number 26. It is a metal that belongs to the first transition series and group 8 of the periodic table. It is, by mass, the most common element on Earth, forming much of Earth's o ...
and sulfur in ''M. sedula'', driven by its membrane
oxidase In biochemistry, an oxidase is an oxidoreductase (any enzyme that catalyzes a redox reaction) that uses dioxygen (O2) as the electron acceptor. In reactions involving donation of a hydrogen atom, oxygen is reduced to water (H2O) or hydrogen peroxid ...
s, is key to the ability of ''M. sedula'' to mobilize metals and bioleach. When grown in the presence of H2, the ability of ''M. sedula'' to leach copper from
chalcopyrite Chalcopyrite ( ) is a copper iron sulfide mineral and the most abundant copper ore mineral. It has the chemical formula CuFeS2 and crystallizes in the tetragonal system. It has a brassy to golden yellow color and a Mohs scale, hardness of 3.5 to 4 ...
(CuFeS2), is reduced.


Ecology

''M. sedula'' can be found in sulfur rich hot springs, volcanic fields, and
acid mine drainage Acid mine drainage, acid and metalliferous drainage (AMD), or acid rock drainage (ARD) is the outflow of acidic water from metal mines and coal mines. Acid rock drainage occurs naturally within some environments as part of the rock weatherin ...
(AMD) communities. These communities are characterized by high metal ion concentrations, low pH and high temperatures. Though the dissolution of pyrite in AMD is a natural process, it is accelerated in the presence of
acidophile Acidophiles or acidophilic organisms are those that thrive under highly acidic conditions (usually at pH 5.0 or below). These organisms can be found in different branches of the Tree of life (biology), tree of life, including Archaea, Bacteria,Bec ...
s such as ''M. sedula'' that are found in these environments, leading to increased rates of acidification of water draining for active and abandoned mines. AMD communities are characterized by a diverse composition of
microorganism A microorganism, or microbe, is an organism of microscopic scale, microscopic size, which may exist in its unicellular organism, single-celled form or as a Colony (biology)#Microbial colonies, colony of cells. The possible existence of unseen ...
s that fill available niches depending on their tolerance to temperature, metal resistance and pH. These communities display a complex
symbiosis Symbiosis (Ancient Greek : living with, companionship < : together; and ''bíōsis'': living) is any type of a close and long-term biological interaction, between two organisms of different species. The two organisms, termed symbionts, can fo ...
through the biogeochemical cycling of sulfur, iron,
carbon Carbon () is a chemical element; it has chemical symbol, symbol C and atomic number 6. It is nonmetallic and tetravalence, tetravalent—meaning that its atoms are able to form up to four covalent bonds due to its valence shell exhibiting 4 ...
and
nitrogen Nitrogen is a chemical element; it has Symbol (chemistry), symbol N and atomic number 7. Nitrogen is a Nonmetal (chemistry), nonmetal and the lightest member of pnictogen, group 15 of the periodic table, often called the Pnictogen, pnictogens. ...
. At high temperatures, ''M. sedula'' fills the niche of iron and sulfur oxidizer, a role that is filled by other acidophiles such as the mesophilic ''
Ferroplasma ''Ferroplasma'' is a genus of Archaea that belong to the family Ferroplasmaceae. Members of the ''Ferroplasma'' are typically acidophilic, pleomorphic, irregularly shaped cocci. The archaean family Ferroplasmaceae was first described in the earl ...
'' spp. and '' Leptospirillum'' spp. at lower temperatures. ''M. sedula'' can also grow on
meteorite A meteorite is a rock (geology), rock that originated in outer space and has fallen to the surface of a planet or Natural satellite, moon. When the original object enters the atmosphere, various factors such as friction, pressure, and chemical ...
s in a lab.


References


Huber, G. ,Spinnler, C. , Gambacorta , A., and Stetter, K. “Metallosphaera sedula gen. and sp. nov. Represents a New Genus of Aerobic, Metal-Mobilizing, Thermoacidophilic Archaebacteria”. Systematic and Applied Microbiology. 1989. p. 38-47.Auernik, K., and Kelly, R. “Physiological Versatility of the Extremely Thermoacidophilic Archaeon Metallosphaera sedula Supported by Transcriptomic Analysis of Heterotrophic, Autotrophic, and Mixotrophic Growth”. Applied and Environmental Microbiology. 2010. p. 931-935.Clark, T., Baldi, F., And Olson, G. “Coal Depyritization by the Thermophilic Archaeon Metallosphaera sedula”. Applied and Environmental Microbiology. 1993. p. 2375-2379.
#http://www.epa.gov/oaqps001/sulfurdioxide/ #http://www.epa.gov/acidrain/what/index.html
Peeples, T.L., and Kelly, R.M., “Bioenergetics of the metal/sulfur-oxidizingextreme thermoacidophile, Metallosphaera sedula”. Fuel. 1993. p. 1577-1752.Auernik, K and Kelly, R. “Impact of Molecular Hydrogen on Chalcopyrite Bioleaching by the Extremely Thermoacidophilic Archaeon Metallosphaera sedula”. Applied and Environmental Microbiology. 2010. p. 2668-2672.

Alber, B., Kung, J., and Fuchs, G. "3-Hydroxypropionyl-Coenzyme A Synthetase from Metallosphaera sedula, an Enzyme Involved in Autotrophic CO2 Fixation". Journal of Bacteriology 2008. p. 1383-1389Baker, B., and Banfield, J. "Microbial Communities in Acid Mine Drainage". FEMS Microbial Ecology. 2002. p. 139-152Auernick, K. S., Maezato, Y., Blum, P. H., Kelly, R. M. “The Genome Sequence of the Metal-Mobilizing, Extremely Thermoacidophilic Archaeon Metallosphaera sedula Provides Insights into Bioleaching-Associated Metabolism”. Applied and Environmental Microbiology. 2008. p. 682-692


External links


Type strain of ''Metallosphaera sedula'' at Bac''Dive'' - the Bacterial Diversity Metadatabase
{{Taxonbar, from=Q5990371 Thermoproteota Archaea described in 1989